RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 MYOM1P52179 1685 aa18.74■□□□□ 0.59
SREBF1-223ENST00000584760 A0A1W2PP64 1363 aa18.74■□□□□ 0.59
SREBF1-223ENST00000584760 NINLQ9Y2I6 1382 aa18.74■□□□□ 0.59
SREBF1-223ENST00000584760 YY1P25490 414 aa18.74■□□□□ 0.59
SREBF1-223ENST00000584760 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
SREBF1-223ENST00000584760 GCP02774 474 aa18.73■□□□□ 0.59
SREBF1-223ENST00000584760 NLRP6P59044 892 aa18.73■□□□□ 0.59
SREBF1-223ENST00000584760 SLC12A5Q9H2X9 1139 aa18.73■□□□□ 0.59
SREBF1-223ENST00000584760 EDC4Q6P2E9 1401 aaKnown RBP18.73■□□□□ 0.59
SREBF1-223ENST00000584760 RGPD5Q99666 1765 aa18.73■□□□□ 0.59
SREBF1-223ENST00000584760 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
SREBF1-223ENST00000584760 PPP1R1BQ9UD71 204 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-223ENST00000584760 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-223ENST00000584760 LTN1O94822 1766 aa18.71■□□□□ 0.59
SREBF1-223ENST00000584760 SPON1Q9HCB6 807 aa18.7■□□□□ 0.58
SREBF1-223ENST00000584760 USP31Q70CQ4 1352 aa18.69■□□□□ 0.58
SREBF1-223ENST00000584760 ZBTB7CA1YPR0 619 aa18.69■□□□□ 0.58
SREBF1-223ENST00000584760 HDGFL2Q7Z4V5 671 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-223ENST00000584760 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
SREBF1-223ENST00000584760 ABCC6O95255 1503 aa18.69■□□□□ 0.58
SREBF1-223ENST00000584760 WNK3Q9BYP7 1800 aa18.68■□□□□ 0.58
SREBF1-223ENST00000584760 KCNQ2O43526 872 aa18.68■□□□□ 0.58
SREBF1-223ENST00000584760 TMF1P82094 1093 aa18.68■□□□□ 0.58
SREBF1-223ENST00000584760 TERF2IPQ9NYB0 399 aa18.68■□□□□ 0.58
SREBF1-223ENST00000584760 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
SREBF1-223ENST00000584760 OVOS2A0A0J9YW53 1432 aa18.67■□□□□ 0.58
SREBF1-223ENST00000584760 OVOS2Q6IE36 1432 aa18.67■□□□□ 0.58
SREBF1-223ENST00000584760 ANKRD36BQ8N2N9 1353 aa18.67■□□□□ 0.58
SREBF1-223ENST00000584760 DCAF8L1A6NGE4 600 aa18.66■□□□□ 0.58
SREBF1-223ENST00000584760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
SREBF1-223ENST00000584760 RREB1Q92766 1687 aa18.66■□□□□ 0.58
SREBF1-223ENST00000584760 KIF20BQ96Q89 1820 aa18.65■□□□□ 0.58
SREBF1-223ENST00000584760 NME9Q86XW9 330 aa18.65■□□□□ 0.58
SREBF1-223ENST00000584760 KCNH5Q8NCM2 988 aa18.65■□□□□ 0.58
SREBF1-223ENST00000584760 NUP188Q5SRE5 1749 aa18.65■□□□□ 0.58
SREBF1-223ENST00000584760 PARP4Q9UKK3 1724 aaKnown RBP18.64■□□□□ 0.57
SREBF1-223ENST00000584760 ARHGEF25Q86VW2 580 aa18.64■□□□□ 0.57
SREBF1-223ENST00000584760 C11orf95C9JLR9 678 aaPredicted RBP18.63■□□□□ 0.57
SREBF1-223ENST00000584760 CRB1P82279 1406 aa18.62■□□□□ 0.57
SREBF1-223ENST00000584760 SOX12O15370 315 aa18.61■□□□□ 0.57
SREBF1-223ENST00000584760 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
SREBF1-223ENST00000584760 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
SREBF1-223ENST00000584760 OVOS2A0A0G2JMS6 1433 aa18.6■□□□□ 0.57
SREBF1-223ENST00000584760 PLSCR1O15162 318 aa18.6■□□□□ 0.57
SREBF1-223ENST00000584760 DDB1Q16531 1140 aa18.6■□□□□ 0.57
SREBF1-223ENST00000584760 PTF1AQ7RTS3 328 aa18.6■□□□□ 0.57
SREBF1-223ENST00000584760 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
SREBF1-223ENST00000584760 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
SREBF1-223ENST00000584760 AXIN2Q9Y2T1 843 aa18.59■□□□□ 0.57
SREBF1-223ENST00000584760 BCL11BQ9C0K0 894 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-223ENST00000584760 PDGFDQ9GZP0 370 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-223ENST00000584760 WDR17Q8IZU2 1322 aa18.56■□□□□ 0.56
SREBF1-223ENST00000584760 ZBTB7AO95365 584 aa18.56■□□□□ 0.56
SREBF1-223ENST00000584760 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.566e-6■■■■□ 25.1
SREBF1-223ENST00000584760 FAM208AQ9UK61 1670 aaKnown RBP18.56■□□□□ 0.56
SREBF1-223ENST00000584760 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
SREBF1-223ENST00000584760 PROM2Q8N271 834 aa18.55■□□□□ 0.56
SREBF1-223ENST00000584760 MARCH10Q8NA82 808 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-223ENST00000584760 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
SREBF1-223ENST00000584760 ANKRD26Q9UPS8 1709 aa18.53■□□□□ 0.56
SREBF1-223ENST00000584760 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-223ENST00000584760 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.56
SREBF1-223ENST00000584760 ERBB3P21860 1342 aa18.51■□□□□ 0.55
SREBF1-223ENST00000584760 CSB-PGBD3P0DP91 1061 aa18.51■□□□□ 0.55
SREBF1-223ENST00000584760 COG3Q96JB2 828 aa18.51■□□□□ 0.55
SREBF1-223ENST00000584760 FYB1O15117 783 aa18.5■□□□□ 0.55
SREBF1-223ENST00000584760 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-223ENST00000584760 CARD14Q9BXL6 1004 aa18.5■□□□□ 0.55
SREBF1-223ENST00000584760 STK32BQ9NY57 414 aa18.5■□□□□ 0.55
SREBF1-223ENST00000584760 SBF2Q86WG5 1849 aa18.5■□□□□ 0.55
SREBF1-223ENST00000584760 PTGER2P43116 358 aa18.49■□□□□ 0.55
SREBF1-223ENST00000584760 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
SREBF1-223ENST00000584760 RGPD2P0DJD1 1756 aa18.49■□□□□ 0.55
SREBF1-223ENST00000584760 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
SREBF1-223ENST00000584760 EXOC5O00471 708 aa18.48■□□□□ 0.55
SREBF1-223ENST00000584760 CARD10Q9BWT7 1032 aa18.48■□□□□ 0.55
SREBF1-223ENST00000584760 GGNBP2Q9H3C7 697 aa18.48■□□□□ 0.55
SREBF1-223ENST00000584760 SLC15A2Q16348 729 aa18.47■□□□□ 0.55
SREBF1-223ENST00000584760 MAP3K19Q56UN5 1328 aa18.47■□□□□ 0.55
SREBF1-223ENST00000584760 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
SREBF1-223ENST00000584760 RGPD3A6NKT7 1758 aaPredicted RBP18.46■□□□□ 0.55
SREBF1-223ENST00000584760 RGPD4Q7Z3J3 1758 aa18.46■□□□□ 0.55
SREBF1-223ENST00000584760 CASZ1Q86V15 1759 aa18.46■□□□□ 0.55
SREBF1-223ENST00000584760 ZNF784Q8NCA9 323 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-223ENST00000584760 IP6K1Q92551 441 aa18.45■□□□□ 0.54
SREBF1-223ENST00000584760 SYT17Q9BSW7 474 aa18.45■□□□□ 0.54
SREBF1-223ENST00000584760 FHDC1Q9C0D6 1143 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-223ENST00000584760 BCL9O00512 1426 aa18.45■□□□□ 0.54
SREBF1-223ENST00000584760 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
SREBF1-223ENST00000584760 FBLN1P23142 703 aa18.44■□□□□ 0.54
SREBF1-223ENST00000584760 ANKRD24Q8TF21 1146 aa18.44■□□□□ 0.54
SREBF1-223ENST00000584760 POLR3GLQ9BT43 218 aa18.44■□□□□ 0.54
SREBF1-223ENST00000584760 HOXC9P31274 260 aa18.43■□□□□ 0.54
SREBF1-223ENST00000584760 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
SREBF1-223ENST00000584760 ACSBG1Q96GR2 724 aa18.42■□□□□ 0.54
SREBF1-223ENST00000584760 MTFR1LQ9H019 292 aa18.42■□□□□ 0.54
SREBF1-223ENST00000584760 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
SREBF1-223ENST00000584760 CGNL1Q0VF96 1302 aa18.41■□□□□ 0.54
SREBF1-223ENST00000584760 SHANK3Q9BYB0 1731 aa18.4■□□□□ 0.54
SREBF1-223ENST00000584760 NLRP2Q9NX02 1062 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms