RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.84	□□□□□ -0.67
RHOT1-216	ENST00000584692	ZBTB3	Q9H5J0	574 aa		10.84	□□□□□ -0.67
RHOT1-216	ENST00000584692	SLURP2	P0DP57	97 aa		10.83	□□□□□ -0.68
RHOT1-216	ENST00000584692	HRC	P23327	699 aa		10.83	□□□□□ -0.68
RHOT1-216	ENST00000584692	GRM5	P41594	1212 aa		10.83	□□□□□ -0.68
RHOT1-216	ENST00000584692	QPCT	Q16769	361 aa		10.83	□□□□□ -0.68
RHOT1-216	ENST00000584692	TMEM132A	Q24JP5	1023 aa		10.83	□□□□□ -0.68
RHOT1-216	ENST00000584692	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.83	□□□□□ -0.68
RHOT1-216	ENST00000584692	MARS	P56192	900 aa	Known RBP	10.82	□□□□□ -0.68
RHOT1-216	ENST00000584692	CSPP1	Q1MSJ5	1256 aa		10.82	□□□□□ -0.68
RHOT1-216	ENST00000584692	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.82	□□□□□ -0.68
RHOT1-216	ENST00000584692	NANOS1	Q8WY41	292 aa	Known RBP	10.82	□□□□□ -0.68
RHOT1-216	ENST00000584692	CABLES1	Q8TDN4	633 aa		10.81	□□□□□ -0.68
RHOT1-216	ENST00000584692	KRTAP4-8	Q9BYQ9	185 aa		10.81	□□□□□ -0.68
RHOT1-216	ENST00000584692	ADAM23	O75077	832 aa		10.8	□□□□□ -0.68
RHOT1-216	ENST00000584692	CTH	P32929	405 aa		10.8	□□□□□ -0.68
RHOT1-216	ENST00000584692	PPP2R2D	Q66LE6	453 aa		10.8	□□□□□ -0.68
RHOT1-216	ENST00000584692	TTLL8	A6PVC2	850 aa		10.79	□□□□□ -0.68
RHOT1-216	ENST00000584692	C4orf48	Q5BLP8	95 aa		10.79	□□□□□ -0.68
RHOT1-216	ENST00000584692	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.79	□□□□□ -0.68
RHOT1-216	ENST00000584692	DESI1	Q6ICB0	168 aa		10.79	□□□□□ -0.68
RHOT1-216	ENST00000584692	CCDC155	Q8N6L0	562 aa		10.78	□□□□□ -0.68
RHOT1-216	ENST00000584692	FIGNL2	A6NMB9	653 aa		10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	NUTM2E	B1AL46	878 aa	Predicted RBP	10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	CFAP99	D6REC4	459 aa		10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	RTL5	Q5HYW3	569 aa	Predicted RBP	10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	SCARF2	Q96GP6	870 aa	Predicted RBP	10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	TSEN34	Q9BSV6	310 aa	Known RBP	10.77	□□□□□ -0.69
RHOT1-216	ENST00000584692	MAP10	Q9P2G4	905 aa		10.75	□□□□□ -0.69
RHOT1-216	ENST00000584692	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.75	□□□□□ -0.69
RHOT1-216	ENST00000584692	LYPD8	Q6UX82	237 aa		10.74	□□□□□ -0.69
RHOT1-216	ENST00000584692	VWA5B2	Q8N398	1253 aa		10.74	□□□□□ -0.69
RHOT1-216	ENST00000584692	MSTN	O14793	375 aa		10.73	□□□□□ -0.69
RHOT1-216	ENST00000584692	AGER	Q15109	404 aa		10.73	□□□□□ -0.69
RHOT1-216	ENST00000584692	CDC14C	A4D256	554 aa		10.72	□□□□□ -0.69
RHOT1-216	ENST00000584692	FSHR	P23945	695 aa		10.72	□□□□□ -0.69
RHOT1-216	ENST00000584692	PLA2G4E	Q3MJ16	856 aa		10.72	□□□□□ -0.69
RHOT1-216	ENST00000584692	SLC35F4	A4IF30	521 aa		10.71	□□□□□ -0.69
RHOT1-216	ENST00000584692	ITGA6	P23229	1130 aa		10.71	□□□□□ -0.69
RHOT1-216	ENST00000584692	RFC5	P40937	340 aa		10.71	□□□□□ -0.69
RHOT1-216	ENST00000584692	LYPD4	Q6UWN0	246 aa		10.71	□□□□□ -0.69
RHOT1-216	ENST00000584692	SPOCK3	Q9BQ16	436 aa		10.71	□□□□□ -0.69
RHOT1-216	ENST00000584692	F12	P00748	615 aa	Predicted RBP	10.7	□□□□□ -0.7
RHOT1-216	ENST00000584692	ITGB2	P05107	769 aa		10.7	□□□□□ -0.7
RHOT1-216	ENST00000584692	ADAMTS2	O95450	1211 aa		10.69	□□□□□ -0.7
RHOT1-216	ENST00000584692	SV2A	Q7L0J3	742 aa		10.69	□□□□□ -0.7
RHOT1-216	ENST00000584692	HELB	Q8NG08	1087 aa	Predicted RBP	10.69	□□□□□ -0.7
RHOT1-216	ENST00000584692	BPHL	Q86WA6	291 aa	Predicted RBP	10.68	□□□□□ -0.7
RHOT1-216	ENST00000584692	TMEM259	Q4ZIN3	620 aa		10.67	□□□□□ -0.7
RHOT1-216	ENST00000584692	EMILIN1	Q9Y6C2	1016 aa		10.67	□□□□□ -0.7
RHOT1-216	ENST00000584692	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	10.66	□□□□□ -0.7
RHOT1-216	ENST00000584692	DCAF5	Q96JK2	942 aa		10.66	□□□□□ -0.7
RHOT1-216	ENST00000584692	C1QTNF2	Q9BXJ5	285 aa		10.66	□□□□□ -0.7
RHOT1-216	ENST00000584692	PER1	O15534	1290 aa	Predicted RBP	10.65	□□□□□ -0.7
RHOT1-216	ENST00000584692	SPINT1	O43278	529 aa		10.65	□□□□□ -0.7
RHOT1-216	ENST00000584692	CTDSPL2	Q05D32	466 aa		10.65	□□□□□ -0.7
RHOT1-216	ENST00000584692	VASH1	Q7L8A9	365 aa	Predicted RBP	10.65	□□□□□ -0.7
RHOT1-216	ENST00000584692	CCDC116	Q8IYX3	515 aa		10.65	□□□□□ -0.7
RHOT1-216	ENST00000584692	TSC1	Q92574	1164 aa		10.65	□□□□□ -0.7
RHOT1-216	ENST00000584692	AP1G2	O75843	785 aa		10.64	□□□□□ -0.71
RHOT1-216	ENST00000584692	PROC	P04070	461 aa		10.64	□□□□□ -0.71
RHOT1-216	ENST00000584692	MAP3K10	Q02779	954 aa		10.64	□□□□□ -0.71
RHOT1-216	ENST00000584692	CBLB	Q13191	982 aa		10.64	□□□□□ -0.71
RHOT1-216	ENST00000584692	MAP4K5	Q9Y4K4	846 aa		10.64	□□□□□ -0.71
RHOT1-216	ENST00000584692	CELA2B	P08218	269 aa	Predicted RBP	10.63	□□□□□ -0.71
RHOT1-216	ENST00000584692	BANK1	Q8NDB2	785 aa		10.63	□□□□□ -0.71
RHOT1-216	ENST00000584692	KRTAP9-2	Q9BYQ4	174 aa		10.63	□□□□□ -0.71
RHOT1-216	ENST00000584692	CNTNAP5	Q8WYK1	1306 aa		10.62	□□□□□ -0.71
RHOT1-216	ENST00000584692	SH3RF1	Q7Z6J0	888 aa		10.62	□□□□□ -0.71
RHOT1-216	ENST00000584692	PSMG3-AS1	Q96PY0	264 aa		10.62	□□□□□ -0.71
RHOT1-216	ENST00000584692	USP17L8	P0C7I0	530 aa		10.61	□□□□□ -0.71
RHOT1-216	ENST00000584692	SRSF11	Q05519	484 aa	Known RBP	10.61	□□□□□ -0.71
RHOT1-216	ENST00000584692		Q6ZVU0	165 aa		10.61	□□□□□ -0.71
RHOT1-216	ENST00000584692	KRTAP9-6	A0A140TA67	174 aa		10.59	□□□□□ -0.71
RHOT1-216	ENST00000584692	CTSO	P43234	321 aa	Predicted RBP	10.59	□□□□□ -0.71
RHOT1-216	ENST00000584692	GAS6	Q14393	721 aa		10.59	□□□□□ -0.71
RHOT1-216	ENST00000584692	TRMT44	Q8IYL2	757 aa	Known RBP	10.59	□□□□□ -0.71
RHOT1-216	ENST00000584692	GALNT6	Q8NCL4	622 aa		10.59	□□□□□ -0.71
RHOT1-216	ENST00000584692	LRRN4	Q8WUT4	740 aa		10.59	□□□□□ -0.71
RHOT1-216	ENST00000584692	SENP3-EIF4A1	A0A087X0R7	540 aa		10.58	□□□□□ -0.72
RHOT1-216	ENST00000584692	SOCS7	O14512	581 aa		10.58	□□□□□ -0.72
RHOT1-216	ENST00000584692	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.58	□□□□□ -0.72
RHOT1-216	ENST00000584692		Q8N3U1	123 aa		10.58	□□□□□ -0.72
RHOT1-216	ENST00000584692	PHF20L1	A8MW92	1017 aa		10.57	□□□□□ -0.72
RHOT1-216	ENST00000584692		K7ELQ4	463 aa	Predicted RBP	10.57	□□□□□ -0.72
RHOT1-216	ENST00000584692	ENAM	Q9NRM1	1142 aa		10.56	□□□□□ -0.72
RHOT1-216	ENST00000584692	MAGEB6P1	A0A0J9YX57	407 aa		10.55	□□□□□ -0.72
RHOT1-216	ENST00000584692	AGBL1	Q96MI9	1066 aa		10.55	□□□□□ -0.72
RHOT1-216	ENST00000584692	INSM2	Q96T92	566 aa	Predicted RBP	10.55	□□□□□ -0.72
RHOT1-216	ENST00000584692	HMX1	Q9NP08	348 aa	Predicted RBP	10.55	□□□□□ -0.72
RHOT1-216	ENST00000584692	PGPEP1	Q9NXJ5	209 aa		10.55	□□□□□ -0.72
RHOT1-216	ENST00000584692	SH3BP5L	Q7L8J4	393 aa		10.54	□□□□□ -0.72
RHOT1-216	ENST00000584692	SNRK	Q9NRH2	765 aa		10.54	□□□□□ -0.72
RHOT1-216	ENST00000584692	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.54	□□□□□ -0.72
RHOT1-216	ENST00000584692	MTMR14	Q8NCE2	650 aa		10.53	□□□□□ -0.72
RHOT1-216	ENST00000584692	RELB	Q01201	579 aa		10.52	□□□□□ -0.73
RHOT1-216	ENST00000584692	NR6A1	Q15406	480 aa		10.52	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms