RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 LARP1Q6PKG0 1096 aaKnown RBP18.47■□□□□ 0.55
ERBB2-220ENST00000584684 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
ERBB2-220ENST00000584684 THRAP3Q9Y2W1 955 aaKnown RBP18.47■□□□□ 0.55
ERBB2-220ENST00000584684 LTN1O94822 1766 aa18.47■□□□□ 0.55
ERBB2-220ENST00000584684 RGPD5Q99666 1765 aa18.46■□□□□ 0.55
ERBB2-220ENST00000584684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.46■□□□□ 0.55
ERBB2-220ENST00000584684 TCP11L2Q8N4U5 519 aa18.46■□□□□ 0.55
ERBB2-220ENST00000584684 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
ERBB2-220ENST00000584684 NME9Q86XW9 330 aa18.45■□□□□ 0.54
ERBB2-220ENST00000584684 TNS1Q9HBL0 1735 aaKnown RBP18.44■□□□□ 0.54
ERBB2-220ENST00000584684 LRRC37A3O60309 1634 aa18.44■□□□□ 0.54
ERBB2-220ENST00000584684 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
ERBB2-220ENST00000584684 AXIN2Q9Y2T1 843 aa18.42■□□□□ 0.54
ERBB2-220ENST00000584684 DISP2A7MBM2 1401 aa18.41■□□□□ 0.54
ERBB2-220ENST00000584684 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
ERBB2-220ENST00000584684 ZRANB1Q9UGI0 708 aa18.41■□□□□ 0.54
ERBB2-220ENST00000584684 ZBTB7CA1YPR0 619 aa18.4■□□□□ 0.54
ERBB2-220ENST00000584684 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.54
ERBB2-220ENST00000584684 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
ERBB2-220ENST00000584684 SOX12O15370 315 aa18.39■□□□□ 0.53
ERBB2-220ENST00000584684 PEAK1Q9H792 1746 aa18.39■□□□□ 0.53
ERBB2-220ENST00000584684 SF3B2Q13435 895 aaKnown RBP18.38■□□□□ 0.53
ERBB2-220ENST00000584684 TOM1L2Q6ZVM7 507 aa18.37■□□□□ 0.53
ERBB2-220ENST00000584684 ERBB3P21860 1342 aa18.37■□□□□ 0.53
ERBB2-220ENST00000584684 CCDC7Q96M83 1385 aa18.37■□□□□ 0.53
ERBB2-220ENST00000584684 FAM196AQ6ZSG2 479 aa18.36■□□□□ 0.53
ERBB2-220ENST00000584684 CDCA7Q9BWT1 371 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-220ENST00000584684 CARD10Q9BWT7 1032 aa18.36■□□□□ 0.53
ERBB2-220ENST00000584684 C11orf95C9JLR9 678 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-220ENST00000584684 OVOS2A0A0G2JMS6 1433 aa18.34■□□□□ 0.53
ERBB2-220ENST00000584684 PDE3BQ13370 1112 aa18.34■□□□□ 0.53
ERBB2-220ENST00000584684 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
ERBB2-220ENST00000584684 COG3Q96JB2 828 aa18.34■□□□□ 0.53
ERBB2-220ENST00000584684 RTL1A6NKG5 1358 aa18.33■□□□□ 0.53
ERBB2-220ENST00000584684 BAG6P46379 1132 aa18.33■□□□□ 0.52
ERBB2-220ENST00000584684 EIF4G2P78344 907 aaKnown RBP eCLIP18.33■□□□□ 0.52
ERBB2-220ENST00000584684 BCL9O00512 1426 aa18.32■□□□□ 0.52
ERBB2-220ENST00000584684 CSB-PGBD3P0DP91 1061 aa18.32■□□□□ 0.52
ERBB2-220ENST00000584684 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
ERBB2-220ENST00000584684 SRCAPQ6ZRS2 3230 aa18.32■□□□□ 0.52
ERBB2-220ENST00000584684 TNS2Q63HR2 1409 aa18.32■□□□□ 0.52
ERBB2-220ENST00000584684 SBF2Q86WG5 1849 aa18.31■□□□□ 0.52
ERBB2-220ENST00000584684 FYB1O15117 783 aa18.31■□□□□ 0.52
ERBB2-220ENST00000584684 RGPD3A6NKT7 1758 aaPredicted RBP18.31■□□□□ 0.52
ERBB2-220ENST00000584684 RGPD4Q7Z3J3 1758 aa18.31■□□□□ 0.52
ERBB2-220ENST00000584684 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
ERBB2-220ENST00000584684 IP6K1Q92551 441 aa18.3■□□□□ 0.52
ERBB2-220ENST00000584684 RREB1Q92766 1687 aa18.3■□□□□ 0.52
ERBB2-220ENST00000584684 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
ERBB2-220ENST00000584684 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
ERBB2-220ENST00000584684 MAP3K19Q56UN5 1328 aa18.29■□□□□ 0.52
ERBB2-220ENST00000584684 HSPA5P11021 654 aaKnown RBP18.29■□□□□ 0.52
ERBB2-220ENST00000584684 DDB1Q16531 1140 aa18.29■□□□□ 0.52
ERBB2-220ENST00000584684 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
ERBB2-220ENST00000584684 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
ERBB2-220ENST00000584684 TRIM37O94972 964 aa18.27■□□□□ 0.52
ERBB2-220ENST00000584684 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
ERBB2-220ENST00000584684 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
ERBB2-220ENST00000584684 HOXC9P31274 260 aa18.25■□□□□ 0.51
ERBB2-220ENST00000584684 NLRP2Q9NX02 1062 aa18.25■□□□□ 0.51
ERBB2-220ENST00000584684 NUP188Q5SRE5 1749 aa18.24■□□□□ 0.51
ERBB2-220ENST00000584684 EN1Q05925 392 aaPredicted RBP18.24■□□□□ 0.51
ERBB2-220ENST00000584684 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
ERBB2-220ENST00000584684 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
ERBB2-220ENST00000584684 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
ERBB2-220ENST00000584684 FLT4P35916 1363 aa18.22■□□□□ 0.51
ERBB2-220ENST00000584684 IL2RBP14784 551 aa18.22■□□□□ 0.51
ERBB2-220ENST00000584684 AMPHP49418 695 aa18.22■□□□□ 0.51
ERBB2-220ENST00000584684 MARCH10Q8NA82 808 aaPredicted RBP18.22■□□□□ 0.51
ERBB2-220ENST00000584684 RGPD2P0DJD1 1756 aa18.22■□□□□ 0.51
ERBB2-220ENST00000584684 EXOC5O00471 708 aa18.21■□□□□ 0.51
ERBB2-220ENST00000584684 APBA3O96018 575 aa18.21■□□□□ 0.51
ERBB2-220ENST00000584684 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
ERBB2-220ENST00000584684 LRP5O75197 1615 aa18.2■□□□□ 0.5
ERBB2-220ENST00000584684 INSRP06213 1382 aa18.2■□□□□ 0.5
ERBB2-220ENST00000584684 RRS1Q15050 365 aaKnown RBP18.2■□□□□ 0.5
ERBB2-220ENST00000584684 FBLN1P23142 703 aa18.19■□□□□ 0.5
ERBB2-220ENST00000584684 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
ERBB2-220ENST00000584684 BCL11BQ9C0K0 894 aaPredicted RBP18.19■□□□□ 0.5
ERBB2-220ENST00000584684 NSD2O96028 1365 aa18.18■□□□□ 0.5
ERBB2-220ENST00000584684 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
ERBB2-220ENST00000584684 NCAPD2Q15021 1401 aa18.16■□□□□ 0.5
ERBB2-220ENST00000584684 MEGF6O75095 1541 aa18.16■□□□□ 0.5
ERBB2-220ENST00000584684 MAP2P11137 1827 aaKnown RBP18.16■□□□□ 0.5
ERBB2-220ENST00000584684 PLSCR1O15162 318 aa18.15■□□□□ 0.5
ERBB2-220ENST00000584684 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
ERBB2-220ENST00000584684 POLR3GLQ9BT43 218 aa18.14■□□□□ 0.49
ERBB2-220ENST00000584684 HSP90AB2PQ58FF8 381 aa18.13■□□□□ 0.49
ERBB2-220ENST00000584684 PANK3Q9H999 370 aa18.13■□□□□ 0.49
ERBB2-220ENST00000584684 BTAF1O14981 1849 aa18.12■□□□□ 0.49
ERBB2-220ENST00000584684 NBPF6Q5VWK0 638 aa18.12■□□□□ 0.49
ERBB2-220ENST00000584684 NBPF4Q96M43 638 aa18.12■□□□□ 0.49
ERBB2-220ENST00000584684 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
ERBB2-220ENST00000584684 KIF7Q2M1P5 1343 aa18.12■□□□□ 0.49
ERBB2-220ENST00000584684 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
ERBB2-220ENST00000584684 PTF1AQ7RTS3 328 aa18.11■□□□□ 0.49
ERBB2-220ENST00000584684 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
ERBB2-220ENST00000584684 DOT1LQ8TEK3 1739 aa18.1■□□□□ 0.49
ERBB2-220ENST00000584684 PSDA5PKW4 1024 aaPredicted RBP18.09■□□□□ 0.49
ERBB2-220ENST00000584684 POLKQ9UBT6 870 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms