RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 GCP02774 474 aa12.28□□□□□ -0.44
CASC3-209ENST00000583902 CNGB1Q14028 1251 aaPredicted RBP12.28□□□□□ -0.44
CASC3-209ENST00000583902 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
CASC3-209ENST00000583902 CPDO75976 1380 aa12.28□□□□□ -0.44
CASC3-209ENST00000583902 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
CASC3-209ENST00000583902 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
CASC3-209ENST00000583902 LTN1O94822 1766 aa12.27□□□□□ -0.45
CASC3-209ENST00000583902 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
CASC3-209ENST00000583902 CRYBG1Q9Y4K1 1723 aa12.26□□□□□ -0.45
CASC3-209ENST00000583902 AMPHP49418 695 aa12.26□□□□□ -0.45
CASC3-209ENST00000583902 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
CASC3-209ENST00000583902 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
CASC3-209ENST00000583902 COL3A1P02461 1466 aaPredicted RBP12.26□□□□□ -0.45
CASC3-209ENST00000583902 ARHGEF25Q86VW2 580 aa12.25□□□□□ -0.45
CASC3-209ENST00000583902 IP6K1Q92551 441 aa12.25□□□□□ -0.45
CASC3-209ENST00000583902 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
CASC3-209ENST00000583902 FCHSD2O94868 740 aa12.24□□□□□ -0.45
CASC3-209ENST00000583902 NEFMP07197 916 aa12.24□□□□□ -0.45
CASC3-209ENST00000583902 XPCQ01831 940 aaPredicted RBP12.24□□□□□ -0.45
CASC3-209ENST00000583902 COL16A1Q07092 1604 aaPredicted RBP12.24□□□□□ -0.45
CASC3-209ENST00000583902 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
CASC3-209ENST00000583902 SHPRHQ149N8 1683 aa12.23□□□□□ -0.45
CASC3-209ENST00000583902 FAM208AQ9UK61 1670 aaKnown RBP12.23□□□□□ -0.45
CASC3-209ENST00000583902 CCDC184Q52MB2 194 aa12.23□□□□□ -0.45
CASC3-209ENST00000583902 FAM9BQ8IZU0 186 aa12.23□□□□□ -0.45
CASC3-209ENST00000583902 EMILIN1Q9Y6C2 1016 aa12.23□□□□□ -0.45
CASC3-209ENST00000583902 HOXC9P31274 260 aa12.22□□□□□ -0.45
CASC3-209ENST00000583902 IL13P35225 146 aa12.22□□□□□ -0.45
CASC3-209ENST00000583902 RRS1Q15050 365 aaKnown RBP12.22□□□□□ -0.45
CASC3-209ENST00000583902 NUTM2GQ5VZR2 741 aa12.22□□□□□ -0.45
CASC3-209ENST00000583902 ABCA3Q99758 1704 aa12.22□□□□□ -0.45
CASC3-209ENST00000583902 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
CASC3-209ENST00000583902 PEAK1Q9H792 1746 aa12.2□□□□□ -0.46
CASC3-209ENST00000583902 JCADQ9P266 1359 aa12.2□□□□□ -0.46
CASC3-209ENST00000583902 U2AF1L5P0DN76 240 aaPredicted RBP12.2□□□□□ -0.46
CASC3-209ENST00000583902 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
CASC3-209ENST00000583902 U2AF1Q01081 240 aaKnown RBP eCLIP12.2□□□□□ -0.464e-7■■□□□ 11.6
CASC3-209ENST00000583902 DDX17Q92841 729 aaKnown RBP12.2□□□□□ -0.46
CASC3-209ENST00000583902 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
CASC3-209ENST00000583902 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
CASC3-209ENST00000583902 SPATA31A6Q5VVP1 1343 aa12.19□□□□□ -0.46
CASC3-209ENST00000583902 RGPD1P0DJD0 1748 aa12.19□□□□□ -0.46
CASC3-209ENST00000583902 KDRP35968 1356 aa12.18□□□□□ -0.46
CASC3-209ENST00000583902 COL18A1P39060 1754 aa12.18□□□□□ -0.46
CASC3-209ENST00000583902 ZBED9Q6R2W3 1325 aa12.18□□□□□ -0.46
CASC3-209ENST00000583902 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
CASC3-209ENST00000583902 PIP4K2BP78356 416 aa12.18□□□□□ -0.46
CASC3-209ENST00000583902 PDE3BQ13370 1112 aa12.18□□□□□ -0.46
CASC3-209ENST00000583902 EIF4A2Q14240 407 aaKnown RBP12.18□□□□□ -0.46
CASC3-209ENST00000583902 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
CASC3-209ENST00000583902 U2SURPO15042 1029 aaKnown RBP12.17□□□□□ -0.46
CASC3-209ENST00000583902 PRDM11Q9NQV5 511 aa12.17□□□□□ -0.46
CASC3-209ENST00000583902 COL14A1Q05707 1796 aaKnown RBP12.17□□□□□ -0.46
CASC3-209ENST00000583902 IGSF1Q8N6C5 1336 aa12.16□□□□□ -0.46
CASC3-209ENST00000583902 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
CASC3-209ENST00000583902 SOX12O15370 315 aa12.16□□□□□ -0.46
CASC3-209ENST00000583902 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
CASC3-209ENST00000583902 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
CASC3-209ENST00000583902 KIAA0232Q92628 1395 aa12.16□□□□□ -0.46
CASC3-209ENST00000583902 ERBB3P21860 1342 aa12.15□□□□□ -0.46
CASC3-209ENST00000583902 FBLN1P23142 703 aa12.15□□□□□ -0.46
CASC3-209ENST00000583902 HNRNPUQ00839 825 aaKnown RBP eCLIP12.15□□□□□ -0.46
CASC3-209ENST00000583902 LMO7Q8WWI1 1683 aa12.15□□□□□ -0.46
CASC3-209ENST00000583902 CAMTA1Q9Y6Y1 1673 aa12.15□□□□□ -0.46
CASC3-209ENST00000583902 ZC3H6P61129 1189 aaKnown RBP12.14□□□□□ -0.47
CASC3-209ENST00000583902 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
CASC3-209ENST00000583902 PLEKHF1Q96S99 279 aa12.14□□□□□ -0.47
CASC3-209ENST00000583902 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
CASC3-209ENST00000583902 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
CASC3-209ENST00000583902 ANKRD24Q8TF21 1146 aa12.13□□□□□ -0.47
CASC3-209ENST00000583902 FBXO41Q8TF61 875 aa12.13□□□□□ -0.47
CASC3-209ENST00000583902 EYA1Q99502 592 aa12.13□□□□□ -0.47
CASC3-209ENST00000583902 RGPD5Q99666 1765 aa12.13□□□□□ -0.47
CASC3-209ENST00000583902 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
CASC3-209ENST00000583902 CALD1Q05682 793 aaKnown RBP12.12□□□□□ -0.47
CASC3-209ENST00000583902 AMOTQ4VCS5 1084 aa12.12□□□□□ -0.47
CASC3-209ENST00000583902 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
CASC3-209ENST00000583902 HTATSF1O43719 755 aaKnown RBP12.11□□□□□ -0.47
CASC3-209ENST00000583902 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
CASC3-209ENST00000583902 SULT6B1Q6IMI4 303 aa12.11□□□□□ -0.47
CASC3-209ENST00000583902 GAS2L2Q8NHY3 880 aa12.11□□□□□ -0.47
CASC3-209ENST00000583902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.47
CASC3-209ENST00000583902 COL5A2P05997 1499 aaPredicted RBP12.1□□□□□ -0.47
CASC3-209ENST00000583902 CSB-PGBD3P0DP91 1061 aa12.1□□□□□ -0.47
CASC3-209ENST00000583902 WDR63Q8IWG1 891 aa12.1□□□□□ -0.47
CASC3-209ENST00000583902 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
CASC3-209ENST00000583902 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
CASC3-209ENST00000583902 FAM83GA6ND36 823 aa12.09□□□□□ -0.47
CASC3-209ENST00000583902 APAF1O14727 1248 aa12.09□□□□□ -0.47
CASC3-209ENST00000583902 EVA1CP58658 441 aa12.09□□□□□ -0.47
CASC3-209ENST00000583902 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
CASC3-209ENST00000583902 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
CASC3-209ENST00000583902 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
CASC3-209ENST00000583902 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
CASC3-209ENST00000583902 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
CASC3-209ENST00000583902 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
CASC3-209ENST00000583902 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
CASC3-209ENST00000583902 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
CASC3-209ENST00000583902 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
CASC3-209ENST00000583902 YTHDC1Q96MU7 727 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms