RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 OVOS2Q6IE36 1432 aa21.63■■□□□ 1.05
SREBF1-222ENST00000583732 AXIN2Q9Y2T1 843 aa21.62■■□□□ 1.05
SREBF1-222ENST00000583732 KTN1Q86UP2 1357 aaKnown RBP21.61■■□□□ 1.05
SREBF1-222ENST00000583732 ZNF692Q9BU19 519 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-222ENST00000583732 NFAT5O94916 1531 aa21.6■■□□□ 1.05
SREBF1-222ENST00000583732 WDR17Q8IZU2 1322 aa21.6■■□□□ 1.05
SREBF1-222ENST00000583732 DDB1Q16531 1140 aa21.6■■□□□ 1.05
SREBF1-222ENST00000583732 TTC21AQ8NDW8 1320 aa21.59■■□□□ 1.05
SREBF1-222ENST00000583732 ARHGEF25Q86VW2 580 aa21.59■■□□□ 1.05
SREBF1-222ENST00000583732 KCNH5Q8NCM2 988 aa21.59■■□□□ 1.05
SREBF1-222ENST00000583732 CSB-PGBD3P0DP91 1061 aa21.58■■□□□ 1.05
SREBF1-222ENST00000583732 NBPF14Q5TI25 921 aa21.57■■□□□ 1.04
SREBF1-222ENST00000583732 CARD11Q9BXL7 1154 aa21.57■■□□□ 1.04
SREBF1-222ENST00000583732 RGPD3A6NKT7 1758 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-222ENST00000583732 RGPD4Q7Z3J3 1758 aa21.56■■□□□ 1.04
SREBF1-222ENST00000583732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.56■■□□□ 1.04
SREBF1-222ENST00000583732 LTN1O94822 1766 aa21.56■■□□□ 1.04
SREBF1-222ENST00000583732 USP54Q70EL1 1684 aa21.54■■□□□ 1.04
SREBF1-222ENST00000583732 SBNO2Q9Y2G9 1366 aa21.54■■□□□ 1.04
SREBF1-222ENST00000583732 TMC1Q8TDI8 760 aa21.54■■□□□ 1.04
SREBF1-222ENST00000583732 CD163L1Q9NR16 1453 aa21.53■■□□□ 1.04
SREBF1-222ENST00000583732 TONSLQ96HA7 1378 aa21.53■■□□□ 1.04
SREBF1-222ENST00000583732 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
SREBF1-222ENST00000583732 PTF1AQ7RTS3 328 aa21.53■■□□□ 1.04
SREBF1-222ENST00000583732 NME9Q86XW9 330 aa21.52■■□□□ 1.04
SREBF1-222ENST00000583732 MARCH10Q8NA82 808 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-222ENST00000583732 ABCC6O95255 1503 aa21.51■■□□□ 1.03
SREBF1-222ENST00000583732 CARD10Q9BWT7 1032 aa21.51■■□□□ 1.03
SREBF1-222ENST00000583732 CDCA7Q9BWT1 371 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-222ENST00000583732 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
SREBF1-222ENST00000583732 HDGFL2Q7Z4V5 671 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-222ENST00000583732 BCL11BQ9C0K0 894 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-222ENST00000583732 CCDC7Q96M83 1385 aa21.48■■□□□ 1.03
SREBF1-222ENST00000583732 SLC12A5Q9H2X9 1139 aa21.47■■□□□ 1.03
SREBF1-222ENST00000583732 TNS2Q63HR2 1409 aa21.46■■□□□ 1.03
SREBF1-222ENST00000583732 PLSCR1O15162 318 aa21.46■■□□□ 1.03
SREBF1-222ENST00000583732 ANO8Q9HCE9 1232 aaPredicted RBP21.46■■□□□ 1.03
SREBF1-222ENST00000583732 CASZ1Q86V15 1759 aa21.46■■□□□ 1.03
SREBF1-222ENST00000583732 EXOC5O00471 708 aa21.45■■□□□ 1.02
SREBF1-222ENST00000583732 PPP1R1BQ9UD71 204 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-222ENST00000583732 A0A1W2PP64 1363 aa21.45■■□□□ 1.02
SREBF1-222ENST00000583732 EDC4Q6P2E9 1401 aaKnown RBP21.45■■□□□ 1.02
SREBF1-222ENST00000583732 NLRP2Q9NX02 1062 aa21.44■■□□□ 1.02
SREBF1-222ENST00000583732 BCL9O00512 1426 aa21.44■■□□□ 1.02
SREBF1-222ENST00000583732 NHSQ6T4R5 1651 aa21.44■■□□□ 1.02
SREBF1-222ENST00000583732 SPON1Q9HCB6 807 aa21.43■■□□□ 1.02
SREBF1-222ENST00000583732 ERBB3P21860 1342 aa21.43■■□□□ 1.02
SREBF1-222ENST00000583732 KCNQ2O43526 872 aa21.42■■□□□ 1.02
SREBF1-222ENST00000583732 ANKRD24Q8TF21 1146 aa21.41■■□□□ 1.02
SREBF1-222ENST00000583732 TERF2IPQ9NYB0 399 aa21.41■■□□□ 1.02
SREBF1-222ENST00000583732 PROM2Q8N271 834 aa21.4■■□□□ 1.02
SREBF1-222ENST00000583732 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
SREBF1-222ENST00000583732 TXNRD1Q16881 649 aa21.38■■□□□ 1.01
SREBF1-222ENST00000583732 PDGFDQ9GZP0 370 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-222ENST00000583732 BTAF1O14981 1849 aa21.37■■□□□ 1.01
SREBF1-222ENST00000583732 IL2RBP14784 551 aa21.37■■□□□ 1.01
SREBF1-222ENST00000583732 FAM208AQ9UK61 1670 aaKnown RBP21.37■■□□□ 1.01
SREBF1-222ENST00000583732 ST20-MTHFSA0A0A6YYL1 179 aa21.36■■□□□ 1.01
SREBF1-222ENST00000583732 LTV1Q96GA3 475 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-222ENST00000583732 STK32BQ9NY57 414 aa21.36■■□□□ 1.01
SREBF1-222ENST00000583732 MYOM1P52179 1685 aa21.36■■□□□ 1.01
SREBF1-222ENST00000583732 ZBTB7AO95365 584 aa21.35■■□□□ 1.01
SREBF1-222ENST00000583732 TESK2Q96S53 571 aa21.35■■□□□ 1.01
SREBF1-222ENST00000583732 RGPD2P0DJD1 1756 aa21.34■■□□□ 1.01
SREBF1-222ENST00000583732 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
SREBF1-222ENST00000583732 PUS7Q96PZ0 661 aaKnown RBP21.33■■□□□ 1.01
SREBF1-222ENST00000583732 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
SREBF1-222ENST00000583732 SLC15A2Q16348 729 aa21.31■■□□□ 1
SREBF1-222ENST00000583732 IP6K1Q92551 441 aa21.31■■□□□ 1
SREBF1-222ENST00000583732 COG3Q96JB2 828 aa21.31■■□□□ 1
SREBF1-222ENST00000583732 ATF5Q9Y2D1 282 aaPredicted RBP21.31■■□□□ 1
SREBF1-222ENST00000583732 PAPPAQ13219 1627 aa21.3■■□□□ 1
SREBF1-222ENST00000583732 FBLN1P23142 703 aa21.3■■□□□ 1
SREBF1-222ENST00000583732 DOT1LQ8TEK3 1739 aa21.29■■□□□ 1
SREBF1-222ENST00000583732 MAP3K19Q56UN5 1328 aa21.29■■□□□ 1
SREBF1-222ENST00000583732 DDX54Q8TDD1 881 aaKnown RBP21.28■■□□□ 1
SREBF1-222ENST00000583732 SHANK3Q9BYB0 1731 aa21.27■■□□□ 1
SREBF1-222ENST00000583732 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
SREBF1-222ENST00000583732 YY1P25490 414 aa21.27■■□□□ 1
SREBF1-222ENST00000583732 AMPHP49418 695 aa21.27■■□□□ 1
SREBF1-222ENST00000583732 KIF20BQ96Q89 1820 aa21.27■□□□□ 0.99
SREBF1-222ENST00000583732 ANKRD36BQ8N2N9 1353 aa21.26■□□□□ 0.99
SREBF1-222ENST00000583732 HOXC9P31274 260 aa21.26■□□□□ 0.99
SREBF1-222ENST00000583732 USP47Q96K76 1375 aa21.25■□□□□ 0.99
SREBF1-222ENST00000583732 PTGER2P43116 358 aa21.25■□□□□ 0.99
SREBF1-222ENST00000583732 TMF1P82094 1093 aa21.23■□□□□ 0.99
SREBF1-222ENST00000583732 GGNBP2Q9H3C7 697 aa21.23■□□□□ 0.99
SREBF1-222ENST00000583732 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
SREBF1-222ENST00000583732 TRIM26Q12899 539 aaPredicted RBP21.22■□□□□ 0.99
SREBF1-222ENST00000583732 RRS1Q15050 365 aaKnown RBP21.22■□□□□ 0.99
SREBF1-222ENST00000583732 ZNF827Q17R98 1081 aa21.22■□□□□ 0.99
SREBF1-222ENST00000583732 SYTL4Q96C24 671 aaPredicted RBP21.22■□□□□ 0.99
SREBF1-222ENST00000583732 MTFR1LQ9H019 292 aa21.22■□□□□ 0.99
SREBF1-222ENST00000583732 MEGF6O75095 1541 aa21.22■□□□□ 0.99
SREBF1-222ENST00000583732 LRRC4BQ9NT99 713 aa21.21■□□□□ 0.99
SREBF1-222ENST00000583732 TUBGCP6Q96RT7 1819 aa21.2■□□□□ 0.98
SREBF1-222ENST00000583732 USHBP1Q8N6Y0 703 aa21.2■□□□□ 0.98
SREBF1-222ENST00000583732 RTL1A6NKG5 1358 aa21.2■□□□□ 0.98
SREBF1-222ENST00000583732 FHDC1Q9C0D6 1143 aaPredicted RBP21.19■□□□□ 0.98
SREBF1-222ENST00000583732 QSER1Q2KHR3 1735 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms