RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 WDR17Q8IZU2 1322 aa21.32■■□□□ 1
CDK5RAP3-226ENST00000583182 CPSF1Q10570 1443 aaKnown RBP21.32■■□□□ 1
CDK5RAP3-226ENST00000583182 ANO8Q9HCE9 1232 aaPredicted RBP21.32■■□□□ 1
CDK5RAP3-226ENST00000583182 AKAP12Q02952 1782 aa21.32■■□□□ 1
CDK5RAP3-226ENST00000583182 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
CDK5RAP3-226ENST00000583182 EVC2Q86UK5 1308 aa21.31■■□□□ 1
CDK5RAP3-226ENST00000583182 CASZ1Q86V15 1759 aa21.31■■□□□ 1
CDK5RAP3-226ENST00000583182 MARCH10Q8NA82 808 aaPredicted RBP21.31■■□□□ 1
CDK5RAP3-226ENST00000583182 L3MBTL2Q969R5 705 aa21.31■■□□□ 1
CDK5RAP3-226ENST00000583182 BCL11BQ9C0K0 894 aaPredicted RBP21.31■■□□□ 1
CDK5RAP3-226ENST00000583182 PPP1R1BQ9UD71 204 aaPredicted RBP21.31■■□□□ 1
CDK5RAP3-226ENST00000583182 ARHGEF25Q86VW2 580 aa21.3■■□□□ 1
CDK5RAP3-226ENST00000583182 TTC21BQ7Z4L5 1316 aa21.29■■□□□ 1
CDK5RAP3-226ENST00000583182 YY1P25490 414 aa21.29■■□□□ 1
CDK5RAP3-226ENST00000583182 PROM2Q8N271 834 aa21.29■■□□□ 1
CDK5RAP3-226ENST00000583182 NINLQ9Y2I6 1382 aa21.28■■□□□ 1
CDK5RAP3-226ENST00000583182 BCL9O00512 1426 aa21.28■■□□□ 1
CDK5RAP3-226ENST00000583182 SOX12O15370 315 aa21.27■■□□□ 1
CDK5RAP3-226ENST00000583182 CDCA7Q9BWT1 371 aaPredicted RBP21.27■■□□□ 1
CDK5RAP3-226ENST00000583182 PDGFDQ9GZP0 370 aaPredicted RBP21.27■■□□□ 1
CDK5RAP3-226ENST00000583182 NFAT5O94916 1531 aa21.26■□□□□ 0.99
CDK5RAP3-226ENST00000583182 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
CDK5RAP3-226ENST00000583182 ZNF692Q9BU19 519 aaPredicted RBP21.26■□□□□ 0.99
CDK5RAP3-226ENST00000583182 CARD10Q9BWT7 1032 aa21.26■□□□□ 0.99
CDK5RAP3-226ENST00000583182 CSB-PGBD3P0DP91 1061 aa21.24■□□□□ 0.99
CDK5RAP3-226ENST00000583182 TTC21AQ8NDW8 1320 aa21.24■□□□□ 0.99
CDK5RAP3-226ENST00000583182 SIN3AQ96ST3 1273 aa21.23■□□□□ 0.99
CDK5RAP3-226ENST00000583182 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
CDK5RAP3-226ENST00000583182 MON2Q7Z3U7 1717 aa21.22■□□□□ 0.99
CDK5RAP3-226ENST00000583182 MYOM1P52179 1685 aa21.21■□□□□ 0.99
CDK5RAP3-226ENST00000583182 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
CDK5RAP3-226ENST00000583182 EXOC5O00471 708 aa21.2■□□□□ 0.98
CDK5RAP3-226ENST00000583182 ZBTB7AO95365 584 aa21.2■□□□□ 0.98
CDK5RAP3-226ENST00000583182 TXNRD1Q16881 649 aa21.2■□□□□ 0.98
CDK5RAP3-226ENST00000583182 ABCC6O95255 1503 aa21.19■□□□□ 0.98
CDK5RAP3-226ENST00000583182 CCDC7Q96M83 1385 aa21.19■□□□□ 0.98
CDK5RAP3-226ENST00000583182 TNS2Q63HR2 1409 aa21.19■□□□□ 0.98
CDK5RAP3-226ENST00000583182 DCAF8L1A6NGE4 600 aa21.18■□□□□ 0.98
CDK5RAP3-226ENST00000583182 PTGER2P43116 358 aa21.18■□□□□ 0.98
CDK5RAP3-226ENST00000583182 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
CDK5RAP3-226ENST00000583182 USP54Q70EL1 1684 aa21.17■□□□□ 0.98
CDK5RAP3-226ENST00000583182 NEUROD1Q13562 356 aa21.16■□□□□ 0.98
CDK5RAP3-226ENST00000583182 SLC15A2Q16348 729 aa21.16■□□□□ 0.98
CDK5RAP3-226ENST00000583182 STK32BQ9NY57 414 aa21.16■□□□□ 0.98
CDK5RAP3-226ENST00000583182 ATF5Q9Y2D1 282 aaPredicted RBP21.16■□□□□ 0.98
CDK5RAP3-226ENST00000583182 LTN1O94822 1766 aa21.15■□□□□ 0.98
CDK5RAP3-226ENST00000583182 USP31Q70CQ4 1352 aa21.15■□□□□ 0.98
CDK5RAP3-226ENST00000583182 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.15■□□□□ 0.98
CDK5RAP3-226ENST00000583182 CD163L1Q9NR16 1453 aa21.14■□□□□ 0.98
CDK5RAP3-226ENST00000583182 ERBB3P21860 1342 aa21.13■□□□□ 0.97
CDK5RAP3-226ENST00000583182 NME9Q86XW9 330 aa21.13■□□□□ 0.97
CDK5RAP3-226ENST00000583182 SBNO2Q9Y2G9 1366 aa21.12■□□□□ 0.97
CDK5RAP3-226ENST00000583182 ACSBG1Q96GR2 724 aa21.12■□□□□ 0.97
CDK5RAP3-226ENST00000583182 NLRP2Q9NX02 1062 aa21.11■□□□□ 0.97
CDK5RAP3-226ENST00000583182 PAPPAQ13219 1627 aa21.11■□□□□ 0.97
CDK5RAP3-226ENST00000583182 BTAF1O14981 1849 aa21.11■□□□□ 0.97
CDK5RAP3-226ENST00000583182 SGIP1Q9BQI5 828 aa21.1■□□□□ 0.97
CDK5RAP3-226ENST00000583182 UTRNP46939 3433 aa21.09■□□□□ 0.97
CDK5RAP3-226ENST00000583182 FHDC1Q9C0D6 1143 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-226ENST00000583182 MTFR1LQ9H019 292 aa21.09■□□□□ 0.97
CDK5RAP3-226ENST00000583182 KAT6BQ8WYB5 2073 aa21.08■□□□□ 0.97
CDK5RAP3-226ENST00000583182 IL2RBP14784 551 aa21.08■□□□□ 0.97
CDK5RAP3-226ENST00000583182 SYT17Q9BSW7 474 aa21.08■□□□□ 0.97
CDK5RAP3-226ENST00000583182 ANKRD24Q8TF21 1146 aa21.07■□□□□ 0.96
CDK5RAP3-226ENST00000583182 TMC1Q8TDI8 760 aa21.06■□□□□ 0.96
CDK5RAP3-226ENST00000583182 SLC12A5Q9H2X9 1139 aa21.06■□□□□ 0.96
CDK5RAP3-226ENST00000583182 EDC4Q6P2E9 1401 aaKnown RBP21.04■□□□□ 0.96
CDK5RAP3-226ENST00000583182 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
CDK5RAP3-226ENST00000583182 ZNF827Q17R98 1081 aa21.03■□□□□ 0.96
CDK5RAP3-226ENST00000583182 HDGFL2Q7Z4V5 671 aaPredicted RBP21.03■□□□□ 0.96
CDK5RAP3-226ENST00000583182 LRRC4BQ9NT99 713 aa21.03■□□□□ 0.96
CDK5RAP3-226ENST00000583182 A0A1W2PP64 1363 aa21.02■□□□□ 0.96
CDK5RAP3-226ENST00000583182 ZNF784Q8NCA9 323 aaPredicted RBP21.02■□□□□ 0.96
CDK5RAP3-226ENST00000583182 CHD4Q14839 1912 aa21.02■□□□□ 0.95
CDK5RAP3-226ENST00000583182 ARXQ96QS3 562 aa21.01■□□□□ 0.95
CDK5RAP3-226ENST00000583182 TERF2IPQ9NYB0 399 aa20.99■□□□□ 0.95
CDK5RAP3-226ENST00000583182 FAM208AQ9UK61 1670 aaKnown RBP20.99■□□□□ 0.95
CDK5RAP3-226ENST00000583182 IP6K1Q92551 441 aa20.98■□□□□ 0.95
CDK5RAP3-226ENST00000583182 QSER1Q2KHR3 1735 aa20.98■□□□□ 0.95
CDK5RAP3-226ENST00000583182 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
CDK5RAP3-226ENST00000583182 DDX54Q8TDD1 881 aaKnown RBP20.97■□□□□ 0.95
CDK5RAP3-226ENST00000583182 AKT1S1Q96B36 256 aa20.97■□□□□ 0.95
CDK5RAP3-226ENST00000583182 LTV1Q96GA3 475 aaPredicted RBP20.97■□□□□ 0.95
CDK5RAP3-226ENST00000583182 RGPD2P0DJD1 1756 aa20.95■□□□□ 0.94
CDK5RAP3-226ENST00000583182 TUBGCP6Q96RT7 1819 aa20.95■□□□□ 0.94
CDK5RAP3-226ENST00000583182 PUS7Q96PZ0 661 aaKnown RBP20.95■□□□□ 0.94
CDK5RAP3-226ENST00000583182 COL24A1Q17RW2 1714 aa20.95■□□□□ 0.94
CDK5RAP3-226ENST00000583182 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
CDK5RAP3-226ENST00000583182 SHANK3Q9BYB0 1731 aa20.94■□□□□ 0.94
CDK5RAP3-226ENST00000583182 SLC27A3Q5K4L6 730 aa20.93■□□□□ 0.94
CDK5RAP3-226ENST00000583182 LY75O60449 1722 aa20.92■□□□□ 0.94
CDK5RAP3-226ENST00000583182 FBLN1P23142 703 aa20.92■□□□□ 0.94
CDK5RAP3-226ENST00000583182 KCNQ4P56696 695 aa20.92■□□□□ 0.94
CDK5RAP3-226ENST00000583182 MAP3K19Q56UN5 1328 aa20.92■□□□□ 0.94
CDK5RAP3-226ENST00000583182 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
CDK5RAP3-226ENST00000583182 NSD2O96028 1365 aa20.91■□□□□ 0.94
CDK5RAP3-226ENST00000583182 HOXC9P31274 260 aa20.91■□□□□ 0.94
CDK5RAP3-226ENST00000583182 SLC16A10Q8TF71 515 aa20.91■□□□□ 0.94
CDK5RAP3-226ENST00000583182 TESK2Q96S53 571 aa20.91■□□□□ 0.94
CDK5RAP3-226ENST00000583182 ANKRD36BQ8N2N9 1353 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms