RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 CCDC173Q0VFZ6 552 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 RNF214Q8ND24 703 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 CNNM1Q9NRU3 951 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 NFE2L2Q16236 605 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 POGZQ7Z3K3 1410 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
ERBB2-214ENST00000583038 CABP4P57796 275 aa19.5■□□□□ 0.71
ERBB2-214ENST00000583038 EPRSP07814 1512 aaKnown RBP19.5■□□□□ 0.71
ERBB2-214ENST00000583038 FYB1O15117 783 aa19.5■□□□□ 0.71
ERBB2-214ENST00000583038 TTC39AQ5SRH9 613 aa19.5■□□□□ 0.71
ERBB2-214ENST00000583038 EPS15P42566 896 aa19.5■□□□□ 0.71
ERBB2-214ENST00000583038 NAP1L1P55209 391 aaKnown RBP19.5■□□□□ 0.71
ERBB2-214ENST00000583038 TRIM22Q8IYM9 498 aa19.5■□□□□ 0.71
ERBB2-214ENST00000583038 RBM42Q9BTD8 480 aaKnown RBP19.5■□□□□ 0.71
ERBB2-214ENST00000583038 ABCC11Q96J66 1382 aa19.49■□□□□ 0.71
ERBB2-214ENST00000583038 CT47A1Q5JQC4 288 aaPredicted RBP19.49■□□□□ 0.71
ERBB2-214ENST00000583038 ANKLE2Q86XL3 938 aa19.49■□□□□ 0.71
ERBB2-214ENST00000583038 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
ERBB2-214ENST00000583038 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
ERBB2-214ENST00000583038 SMARCE1Q969G3 411 aa19.49■□□□□ 0.71
ERBB2-214ENST00000583038 KRT85P78386 507 aa19.49■□□□□ 0.71
ERBB2-214ENST00000583038 NESP48681 1621 aa19.49■□□□□ 0.71
ERBB2-214ENST00000583038 FIBPO43427 364 aa19.49■□□□□ 0.71
ERBB2-214ENST00000583038 ERCC4Q92889 916 aaPredicted RBP19.49■□□□□ 0.71
ERBB2-214ENST00000583038 KRT32Q14532 448 aa19.48■□□□□ 0.71
ERBB2-214ENST00000583038 R3HCC1Q9Y3T6 440 aaKnown RBP19.48■□□□□ 0.71
ERBB2-214ENST00000583038 CCDC192P0DO97 292 aa19.47■□□□□ 0.71
ERBB2-214ENST00000583038 CTNNA3Q9UI47 895 aa19.47■□□□□ 0.71
ERBB2-214ENST00000583038 TMPOP42166 694 aaKnown RBP19.47■□□□□ 0.71
ERBB2-214ENST00000583038 PDILTQ8N807 584 aa19.47■□□□□ 0.71
ERBB2-214ENST00000583038 BLOC1S2Q6QNY1 142 aa19.46■□□□□ 0.71
ERBB2-214ENST00000583038 SRGAP3O43295 1099 aa19.45■□□□□ 0.7
ERBB2-214ENST00000583038 CCDC57Q2TAC2 916 aa19.45■□□□□ 0.7
ERBB2-214ENST00000583038 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
ERBB2-214ENST00000583038 ODF2Q5BJF6 829 aa19.45■□□□□ 0.7
ERBB2-214ENST00000583038 KCNH5Q8NCM2 988 aa19.45■□□□□ 0.7
ERBB2-214ENST00000583038 DACH1Q9UI36 760 aa19.45■□□□□ 0.7
ERBB2-214ENST00000583038 TOM1L2Q6ZVM7 507 aa19.45■□□□□ 0.7
ERBB2-214ENST00000583038 CEP126Q9P2H0 1117 aa19.45■□□□□ 0.7
ERBB2-214ENST00000583038 CDK5RAP3Q96JB5 506 aa19.44■□□□□ 0.7
ERBB2-214ENST00000583038 HMGB2P26583 209 aaKnown RBP19.44■□□□□ 0.7
ERBB2-214ENST00000583038 MAGEC2Q9UBF1 373 aaPredicted RBP19.44■□□□□ 0.7
ERBB2-214ENST00000583038 CDKL5O76039 1030 aa19.44■□□□□ 0.7
ERBB2-214ENST00000583038 ABCA10Q8WWZ4 1543 aa19.44■□□□□ 0.7
ERBB2-214ENST00000583038 IKQ13123 557 aaPredicted RBP19.44■□□□□ 0.7
ERBB2-214ENST00000583038 MAP3K1Q13233 1512 aa19.44■□□□□ 0.7
ERBB2-214ENST00000583038 RDXP35241 583 aaKnown RBP19.43■□□□□ 0.7
ERBB2-214ENST00000583038 MYO6Q9UM54 1294 aa19.43■□□□□ 0.7
ERBB2-214ENST00000583038 ATP2B1P20020 1258 aa19.43■□□□□ 0.7
ERBB2-214ENST00000583038 SMC2O95347 1197 aa19.43■□□□□ 0.7
ERBB2-214ENST00000583038 ALDH1L2Q3SY69 923 aa19.43■□□□□ 0.7
ERBB2-214ENST00000583038 VSIG10Q8N0Z9 540 aa19.43■□□□□ 0.7
ERBB2-214ENST00000583038 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
ERBB2-214ENST00000583038 RRP12Q5JTH9 1297 aaKnown RBP19.42■□□□□ 0.7
ERBB2-214ENST00000583038 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
ERBB2-214ENST00000583038 LARP1BQ659C4 914 aaKnown RBP19.42■□□□□ 0.7
ERBB2-214ENST00000583038 CCAR1Q8IX12 1150 aaKnown RBP19.42■□□□□ 0.7
ERBB2-214ENST00000583038 NUDT16Q96DE0 195 aaKnown RBP19.42■□□□□ 0.7
ERBB2-214ENST00000583038 STRN4Q9NRL3 753 aa19.42■□□□□ 0.7
ERBB2-214ENST00000583038 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
ERBB2-214ENST00000583038 RAPGEF3O95398 923 aa19.42■□□□□ 0.7
ERBB2-214ENST00000583038 MPHOSPH8Q99549 860 aa19.42■□□□□ 0.7
ERBB2-214ENST00000583038 CFAP45Q9UL16 551 aa19.41■□□□□ 0.7
ERBB2-214ENST00000583038 PRDM11Q9NQV5 511 aa19.41■□□□□ 0.7
ERBB2-214ENST00000583038 AACSQ86V21 672 aa19.41■□□□□ 0.7
ERBB2-214ENST00000583038 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
ERBB2-214ENST00000583038 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
ERBB2-214ENST00000583038 SLC26A8Q96RN1 970 aa19.4■□□□□ 0.7
ERBB2-214ENST00000583038 FAM177BA6PVY3 158 aa19.4■□□□□ 0.7
ERBB2-214ENST00000583038 TNMDQ9H2S6 317 aa19.4■□□□□ 0.7
ERBB2-214ENST00000583038 BTBD11A6QL63 1104 aa19.4■□□□□ 0.7
ERBB2-214ENST00000583038 STIM1Q13586 685 aa19.4■□□□□ 0.7
ERBB2-214ENST00000583038 LUC7LQ9NQ29 371 aaKnown RBP19.4■□□□□ 0.7
ERBB2-214ENST00000583038 CAGE1Q8TC20 777 aa19.4■□□□□ 0.7
ERBB2-214ENST00000583038 FMNL2Q96PY5 1086 aa19.39■□□□□ 0.7
ERBB2-214ENST00000583038 ZNHIT6Q9NWK9 470 aaKnown RBP19.39■□□□□ 0.7
ERBB2-214ENST00000583038 SIL1Q9H173 461 aa19.39■□□□□ 0.69
ERBB2-214ENST00000583038 NOL7Q9UMY1 257 aaKnown RBP19.39■□□□□ 0.69
ERBB2-214ENST00000583038 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
ERBB2-214ENST00000583038 ME1P48163 572 aa19.39■□□□□ 0.69
ERBB2-214ENST00000583038 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.69
ERBB2-214ENST00000583038 RAB11FIP3O75154 756 aa19.38■□□□□ 0.69
ERBB2-214ENST00000583038 CCDC69A6NI79 296 aa19.38■□□□□ 0.69
ERBB2-214ENST00000583038 RRS1Q15050 365 aaKnown RBP19.38■□□□□ 0.69
ERBB2-214ENST00000583038 TXLNBQ8N3L3 684 aa19.38■□□□□ 0.69
ERBB2-214ENST00000583038 PDRG1Q9NUG6 133 aa19.37■□□□□ 0.69
ERBB2-214ENST00000583038 GLRX3O76003 335 aaKnown RBP19.37■□□□□ 0.69
ERBB2-214ENST00000583038 SAMD1Q6SPF0 538 aaPredicted RBP19.37■□□□□ 0.69
ERBB2-214ENST00000583038 TMEM57Q8N5G2 664 aa19.37■□□□□ 0.69
ERBB2-214ENST00000583038 MTMR7Q9Y216 660 aa19.37■□□□□ 0.69
ERBB2-214ENST00000583038 NOM1Q5C9Z4 860 aaKnown RBP19.37■□□□□ 0.69
ERBB2-214ENST00000583038 CCDC184Q52MB2 194 aa19.37■□□□□ 0.69
ERBB2-214ENST00000583038 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
ERBB2-214ENST00000583038 MCM4P33991 863 aa19.36■□□□□ 0.69
ERBB2-214ENST00000583038 DDX54Q8TDD1 881 aaKnown RBP19.36■□□□□ 0.69
ERBB2-214ENST00000583038 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
ERBB2-214ENST00000583038 CBFA2T2O43439 604 aa19.35■□□□□ 0.69
ERBB2-214ENST00000583038 WASF1Q92558 559 aa19.35■□□□□ 0.69
ERBB2-214ENST00000583038 SERPINC1P01008 464 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms