RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 GJD4Q96KN9 370 aaPredicted RBP11.33□□□□□ -0.6
KPNB1-213ENST00000583013 SLC12A5Q9H2X9 1139 aa11.33□□□□□ -0.6
KPNB1-213ENST00000583013 PRDM11Q9NQV5 511 aa11.33□□□□□ -0.6
KPNB1-213ENST00000583013 BTG4Q9NY30 223 aa11.33□□□□□ -0.6
KPNB1-213ENST00000583013 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
KPNB1-213ENST00000583013 NFAT5O94916 1531 aa11.33□□□□□ -0.6
KPNB1-213ENST00000583013 ANKRD36BQ8N2N9 1353 aa11.32□□□□□ -0.6
KPNB1-213ENST00000583013 COL18A1P39060 1754 aa11.32□□□□□ -0.6
KPNB1-213ENST00000583013 ABCC6O95255 1503 aa11.32□□□□□ -0.6
KPNB1-213ENST00000583013 NLRP6P59044 892 aa11.32□□□□□ -0.6
KPNB1-213ENST00000583013 CAMTA1Q9Y6Y1 1673 aa11.31□□□□□ -0.6
KPNB1-213ENST00000583013 ZC3H6P61129 1189 aaKnown RBP11.31□□□□□ -0.6
KPNB1-213ENST00000583013 EP400Q96L91 3159 aa11.3□□□□□ -0.6
KPNB1-213ENST00000583013 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
KPNB1-213ENST00000583013 OVOS2A0A0J9YW53 1432 aa11.3□□□□□ -0.6
KPNB1-213ENST00000583013 OVOS2Q6IE36 1432 aa11.3□□□□□ -0.6
KPNB1-213ENST00000583013 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
KPNB1-213ENST00000583013 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
KPNB1-213ENST00000583013 FKBP8Q14318 412 aa11.3□□□□□ -0.6
KPNB1-213ENST00000583013 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
KPNB1-213ENST00000583013 AATKQ6ZMQ8 1374 aa11.29□□□□□ -0.6
KPNB1-213ENST00000583013 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
KPNB1-213ENST00000583013 CHRNA2Q15822 529 aa11.29□□□□□ -0.6
KPNB1-213ENST00000583013 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
KPNB1-213ENST00000583013 KCNH5Q8NCM2 988 aa11.29□□□□□ -0.6
KPNB1-213ENST00000583013 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
KPNB1-213ENST00000583013 COL5A2P05997 1499 aaPredicted RBP11.29□□□□□ -0.6
KPNB1-213ENST00000583013 LTN1O94822 1766 aa11.28□□□□□ -0.6
KPNB1-213ENST00000583013 KIF20BQ96Q89 1820 aa11.28□□□□□ -0.6
KPNB1-213ENST00000583013 HSPA5P11021 654 aaKnown RBP11.28□□□□□ -0.6
KPNB1-213ENST00000583013 NME9Q86XW9 330 aa11.28□□□□□ -0.6
KPNB1-213ENST00000583013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.28□□□□□ -0.6
KPNB1-213ENST00000583013 SPATA31A5Q5VU36 1347 aa11.28□□□□□ -0.6
KPNB1-213ENST00000583013 SPATA31A7Q8IWB4 1347 aa11.28□□□□□ -0.6
KPNB1-213ENST00000583013 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.61
KPNB1-213ENST00000583013 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
KPNB1-213ENST00000583013 WNK3Q9BYP7 1800 aa11.26□□□□□ -0.61
KPNB1-213ENST00000583013 ARHGEF25Q86VW2 580 aa11.26□□□□□ -0.61
KPNB1-213ENST00000583013 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
KPNB1-213ENST00000583013 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
KPNB1-213ENST00000583013 SEPT12Q8IYM1 358 aa11.25□□□□□ -0.61
KPNB1-213ENST00000583013 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
KPNB1-213ENST00000583013 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
KPNB1-213ENST00000583013 CRB1P82279 1406 aa11.25□□□□□ -0.61
KPNB1-213ENST00000583013 PARP4Q9UKK3 1724 aaKnown RBP11.24□□□□□ -0.61
KPNB1-213ENST00000583013 STRN4Q9NRL3 753 aa11.24□□□□□ -0.61
KPNB1-213ENST00000583013 EVA1CP58658 441 aa11.23□□□□□ -0.61
KPNB1-213ENST00000583013 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
KPNB1-213ENST00000583013 LARP1Q6PKG0 1096 aaKnown RBP11.23□□□□□ -0.61
KPNB1-213ENST00000583013 ZBTB7CA1YPR0 619 aa11.22□□□□□ -0.61
KPNB1-213ENST00000583013 SOX12O15370 315 aa11.22□□□□□ -0.61
KPNB1-213ENST00000583013 BARGINQ6ZT62 677 aa11.22□□□□□ -0.61
KPNB1-213ENST00000583013 WDR17Q8IZU2 1322 aa11.22□□□□□ -0.61
KPNB1-213ENST00000583013 COG3Q96JB2 828 aa11.22□□□□□ -0.61
KPNB1-213ENST00000583013 NSD3Q9BZ95 1437 aa11.22□□□□□ -0.61
KPNB1-213ENST00000583013 FAM208AQ9UK61 1670 aaKnown RBP11.22□□□□□ -0.61
KPNB1-213ENST00000583013 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
KPNB1-213ENST00000583013 AXIN2Q9Y2T1 843 aa11.22□□□□□ -0.61
KPNB1-213ENST00000583013 THRAP3Q9Y2W1 955 aaKnown RBP11.22□□□□□ -0.61
KPNB1-213ENST00000583013 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.61
KPNB1-213ENST00000583013 FYB1O15117 783 aa11.21□□□□□ -0.61
KPNB1-213ENST00000583013 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.61
KPNB1-213ENST00000583013 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
KPNB1-213ENST00000583013 KRT27Q7Z3Y8 459 aa11.2□□□□□ -0.62
KPNB1-213ENST00000583013 PROM2Q8N271 834 aa11.2□□□□□ -0.62
KPNB1-213ENST00000583013 CARD14Q9BXL6 1004 aa11.2□□□□□ -0.62
KPNB1-213ENST00000583013 RTL1A6NKG5 1358 aa11.19□□□□□ -0.62
KPNB1-213ENST00000583013 ERBB3P21860 1342 aa11.19□□□□□ -0.62
KPNB1-213ENST00000583013 A0A0G2JS52 829 aa11.19□□□□□ -0.62
KPNB1-213ENST00000583013 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
KPNB1-213ENST00000583013 MYT1Q01538 1121 aa11.19□□□□□ -0.62
KPNB1-213ENST00000583013 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
KPNB1-213ENST00000583013 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
KPNB1-213ENST00000583013 TOM1L2Q6ZVM7 507 aa11.18□□□□□ -0.62
KPNB1-213ENST00000583013 CCDC125Q86Z20 511 aa11.18□□□□□ -0.62
KPNB1-213ENST00000583013 GGNBP2Q9H3C7 697 aa11.18□□□□□ -0.62
KPNB1-213ENST00000583013 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
KPNB1-213ENST00000583013 KIF24Q5T7B8 1368 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 CCDC7Q96M83 1385 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 CGNL1Q0VF96 1302 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 KIF7Q2M1P5 1343 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 IP6K1Q92551 441 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 POLR3GLQ9BT43 218 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 CARD10Q9BWT7 1032 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 PEAK1Q9H792 1746 aa11.17□□□□□ -0.62
KPNB1-213ENST00000583013 TNS1Q9HBL0 1735 aaKnown RBP11.17□□□□□ -0.62
KPNB1-213ENST00000583013 NSD2O96028 1365 aa11.16□□□□□ -0.62
KPNB1-213ENST00000583013 CSB-PGBD3P0DP91 1061 aa11.15□□□□□ -0.62
KPNB1-213ENST00000583013 HOXC9P31274 260 aa11.15□□□□□ -0.62
KPNB1-213ENST00000583013 CDCA7Q9BWT1 371 aaPredicted RBP11.15□□□□□ -0.62
KPNB1-213ENST00000583013 PANK3Q9H999 370 aa11.15□□□□□ -0.62
KPNB1-213ENST00000583013 RGPD2P0DJD1 1756 aa11.14□□□□□ -0.63
KPNB1-213ENST00000583013 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
KPNB1-213ENST00000583013 FLT4P35916 1363 aa11.14□□□□□ -0.63
KPNB1-213ENST00000583013 TNS2Q63HR2 1409 aa11.13□□□□□ -0.63
KPNB1-213ENST00000583013 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
KPNB1-213ENST00000583013 FBLN1P23142 703 aa11.13□□□□□ -0.63
KPNB1-213ENST00000583013 AMPHP49418 695 aa11.13□□□□□ -0.63
KPNB1-213ENST00000583013 RRS1Q15050 365 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms