RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 KCNH5Q8NCM2 988 aa28.16■■■□□ 2.1
SNX11-209ENST00000581705 CRB1P82279 1406 aa28.14■■■□□ 2.1
SNX11-209ENST00000581705 FAM196AQ6ZSG2 479 aa28.14■■■□□ 2.1
SNX11-209ENST00000581705 MON2Q7Z3U7 1717 aa28.14■■■□□ 2.1
SNX11-209ENST00000581705 ARHGEF25Q86VW2 580 aa28.14■■■□□ 2.1
SNX11-209ENST00000581705 CD163L1Q9NR16 1453 aa28.14■■■□□ 2.09
SNX11-209ENST00000581705 RGPD1P0DJD0 1748 aa28.13■■■□□ 2.09
SNX11-209ENST00000581705 COL18A1P39060 1754 aa28.13■■■□□ 2.09
SNX11-209ENST00000581705 NINLQ9Y2I6 1382 aa28.13■■■□□ 2.09
SNX11-209ENST00000581705 MYOM1P52179 1685 aa28.12■■■□□ 2.09
SNX11-209ENST00000581705 PDE3BQ13370 1112 aa28.11■■■□□ 2.09
SNX11-209ENST00000581705 TMC1Q8TDI8 760 aa28.11■■■□□ 2.09
SNX11-209ENST00000581705 SLC12A5Q9H2X9 1139 aa28.1■■■□□ 2.09
SNX11-209ENST00000581705 AXIN2Q9Y2T1 843 aa28.1■■■□□ 2.09
SNX11-209ENST00000581705 DISP2A7MBM2 1401 aa28.09■■■□□ 2.09
SNX11-209ENST00000581705 ANP32CO43423 234 aa28.09■■■□□ 2.09
SNX11-209ENST00000581705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.09■■■□□ 2.09
SNX11-209ENST00000581705 USP31Q70CQ4 1352 aa28.08■■■□□ 2.09
SNX11-209ENST00000581705 NFAT5O94916 1531 aa28.08■■■□□ 2.09
SNX11-209ENST00000581705 SOX12O15370 315 aa28.08■■■□□ 2.09
SNX11-209ENST00000581705 EN1Q05925 392 aaPredicted RBP28.08■■■□□ 2.09
SNX11-209ENST00000581705 HDGFL2Q7Z4V5 671 aaPredicted RBP28.08■■■□□ 2.09
SNX11-209ENST00000581705 WDR17Q8IZU2 1322 aa28.07■■■□□ 2.08
SNX11-209ENST00000581705 TNS1Q9HBL0 1735 aaKnown RBP28.07■■■□□ 2.08
SNX11-209ENST00000581705 PARP4Q9UKK3 1724 aaKnown RBP28.06■■■□□ 2.08
SNX11-209ENST00000581705 TRIM37O94972 964 aa28.06■■■□□ 2.08
SNX11-209ENST00000581705 TOM1L2Q6ZVM7 507 aa28.06■■■□□ 2.08
SNX11-209ENST00000581705 MIER1Q8N108 512 aa28.06■■■□□ 2.08
SNX11-209ENST00000581705 TERF2IPQ9NYB0 399 aa28.06■■■□□ 2.08
SNX11-209ENST00000581705 NME9Q86XW9 330 aa28.04■■■□□ 2.08
SNX11-209ENST00000581705 EDC4Q6P2E9 1401 aaKnown RBP28.04■■■□□ 2.08
SNX11-209ENST00000581705 USP54Q70EL1 1684 aa28.03■■■□□ 2.08
SNX11-209ENST00000581705 A0A1W2PP64 1363 aa28.03■■■□□ 2.08
SNX11-209ENST00000581705 PANK3Q9H999 370 aa28.01■■■□□ 2.08
SNX11-209ENST00000581705 ABCC6O95255 1503 aa28.01■■■□□ 2.07
SNX11-209ENST00000581705 PER1O15534 1290 aaPredicted RBP28.01■■■□□ 2.07
SNX11-209ENST00000581705 RGPD5Q99666 1765 aa27.99■■■□□ 2.07
SNX11-209ENST00000581705 CAMKK2Q96RR4 588 aa27.99■■■□□ 2.07
SNX11-209ENST00000581705 CARD10Q9BWT7 1032 aa27.99■■■□□ 2.07
SNX11-209ENST00000581705 APBA3O96018 575 aa27.98■■■□□ 2.07
SNX11-209ENST00000581705 EZH2Q15910 746 aaKnown RBP27.98■■■□□ 2.07
SNX11-209ENST00000581705 CSB-PGBD3P0DP91 1061 aa27.97■■■□□ 2.07
SNX11-209ENST00000581705 DDB1Q16531 1140 aa27.97■■■□□ 2.07
SNX11-209ENST00000581705 CDCA7Q9BWT1 371 aaPredicted RBP27.97■■■□□ 2.07
SNX11-209ENST00000581705 LRRC37A3O60309 1634 aa27.96■■■□□ 2.07
SNX11-209ENST00000581705 PARD3Q8TEW0 1356 aa27.96■■■□□ 2.07
SNX11-209ENST00000581705 NPC1L1Q9UHC9 1359 aa27.96■■■□□ 2.07
SNX11-209ENST00000581705 ANKRD36BQ8N2N9 1353 aa27.95■■■□□ 2.07
SNX11-209ENST00000581705 CCER2I3L3R5 266 aa27.94■■■□□ 2.06
SNX11-209ENST00000581705 PRKRIP1Q9H875 184 aaPredicted RBP27.94■■■□□ 2.06
SNX11-209ENST00000581705 OVOS2A0A0G2JMS6 1433 aa27.94■■■□□ 2.06
SNX11-209ENST00000581705 OVOS2A0A0J9YW53 1432 aa27.94■■■□□ 2.06
SNX11-209ENST00000581705 OVOS2Q6IE36 1432 aa27.94■■■□□ 2.06
SNX11-209ENST00000581705 PEAK1Q9H792 1746 aa27.93■■■□□ 2.06
SNX11-209ENST00000581705 PSDA5PKW4 1024 aaPredicted RBP27.93■■■□□ 2.06
SNX11-209ENST00000581705 WNK3Q9BYP7 1800 aa27.93■■■□□ 2.06
SNX11-209ENST00000581705 KNSTRNQ9Y448 316 aa27.92■■■□□ 2.06
SNX11-209ENST00000581705 ERBB3P21860 1342 aa27.9■■■□□ 2.06
SNX11-209ENST00000581705 RALBP1Q15311 655 aa27.89■■■□□ 2.06
SNX11-209ENST00000581705 LTN1O94822 1766 aa27.89■■■□□ 2.05
SNX11-209ENST00000581705 R3HDM1Q15032 1099 aaKnown RBP27.87■■■□□ 2.05
SNX11-209ENST00000581705 MARCH10Q8NA82 808 aaPredicted RBP27.87■■■□□ 2.05
SNX11-209ENST00000581705 BCL9O00512 1426 aa27.86■■■□□ 2.05
SNX11-209ENST00000581705 LRP5O75197 1615 aa27.85■■■□□ 2.05
SNX11-209ENST00000581705 AMER1Q5JTC6 1135 aaPredicted RBP27.84■■■□□ 2.05
SNX11-209ENST00000581705 RREB1Q92766 1687 aa27.84■■■□□ 2.05
SNX11-209ENST00000581705 EXOC5O00471 708 aa27.84■■■□□ 2.05
SNX11-209ENST00000581705 ANKRD24Q8TF21 1146 aa27.84■■■□□ 2.05
SNX11-209ENST00000581705 COG3Q96JB2 828 aa27.84■■■□□ 2.05
SNX11-209ENST00000581705 NLRP2Q9NX02 1062 aa27.84■■■□□ 2.05
SNX11-209ENST00000581705 SBF2Q86WG5 1849 aa27.83■■■□□ 2.05
SNX11-209ENST00000581705 CARD14Q9BXL6 1004 aa27.83■■■□□ 2.05
SNX11-209ENST00000581705 NSD3Q9BZ95 1437 aa27.82■■■□□ 2.04
SNX11-209ENST00000581705 IP6K1Q92551 441 aa27.82■■■□□ 2.04
SNX11-209ENST00000581705 BCL11BQ9C0K0 894 aaPredicted RBP27.82■■■□□ 2.04
SNX11-209ENST00000581705 NSD2O96028 1365 aa27.81■■■□□ 2.04
SNX11-209ENST00000581705 TNS2Q63HR2 1409 aa27.8■■■□□ 2.04
SNX11-209ENST00000581705 NUP188Q5SRE5 1749 aa27.8■■■□□ 2.04
SNX11-209ENST00000581705 PLSCR1O15162 318 aa27.79■■■□□ 2.04
SNX11-209ENST00000581705 CGNL1Q0VF96 1302 aa27.78■■■□□ 2.04
SNX11-209ENST00000581705 PTF1AQ7RTS3 328 aa27.78■■■□□ 2.04
SNX11-209ENST00000581705 MAP3K19Q56UN5 1328 aa27.77■■■□□ 2.04
SNX11-209ENST00000581705 FYB1O15117 783 aa27.76■■■□□ 2.04
SNX11-209ENST00000581705 IL2RBP14784 551 aa27.76■■■□□ 2.04
SNX11-209ENST00000581705 NBPF14Q5TI25 921 aa27.76■■■□□ 2.04
SNX11-209ENST00000581705 RGPD3A6NKT7 1758 aaPredicted RBP27.76■■■□□ 2.03
SNX11-209ENST00000581705 RGPD4Q7Z3J3 1758 aa27.76■■■□□ 2.03
SNX11-209ENST00000581705 MYBBP1AQ9BQG0 1328 aaKnown RBP27.76■■■□□ 2.03
SNX11-209ENST00000581705 FBLN1P23142 703 aa27.74■■■□□ 2.03
SNX11-209ENST00000581705 HOXC9P31274 260 aa27.73■■■□□ 2.03
SNX11-209ENST00000581705 AMPHP49418 695 aa27.72■■■□□ 2.03
SNX11-209ENST00000581705 GGNBP2Q9H3C7 697 aa27.72■■■□□ 2.03
SNX11-209ENST00000581705 CC2D1BQ5T0F9 858 aaKnown RBP27.71■■■□□ 2.03
SNX11-209ENST00000581705 LTV1Q96GA3 475 aaPredicted RBP27.71■■■□□ 2.03
SNX11-209ENST00000581705 FAM208AQ9UK61 1670 aaKnown RBP27.7■■■□□ 2.02
SNX11-209ENST00000581705 RTL1A6NKG5 1358 aa27.69■■■□□ 2.02
SNX11-209ENST00000581705 PROM2Q8N271 834 aa27.68■■■□□ 2.02
SNX11-209ENST00000581705 RRS1Q15050 365 aaKnown RBP27.67■■■□□ 2.02
SNX11-209ENST00000581705 ANKRD26Q9UPS8 1709 aa27.67■■■□□ 2.02
SNX11-209ENST00000581705 KCNQ2O43526 872 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms