RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 GPR162Q16538 588 aa9.83□□□□□ -0.84
TVP23C-208ENST00000581273 IL27Q8NEV9 243 aa9.83□□□□□ -0.84
TVP23C-208ENST00000581273 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
TVP23C-208ENST00000581273 DNAJC5GQ8N7S2 189 aa9.82□□□□□ -0.84
TVP23C-208ENST00000581273 PARD3Q8TEW0 1356 aa9.82□□□□□ -0.84
TVP23C-208ENST00000581273 NPHP3Q7Z494 1330 aa9.82□□□□□ -0.84
TVP23C-208ENST00000581273 CASZ1Q86V15 1759 aa9.81□□□□□ -0.84
TVP23C-208ENST00000581273 PLCH1Q4KWH8 1693 aa9.81□□□□□ -0.84
TVP23C-208ENST00000581273 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
TVP23C-208ENST00000581273 MRS2Q9HD23 443 aa9.81□□□□□ -0.84
TVP23C-208ENST00000581273 DLC1Q96QB1 1528 aa9.81□□□□□ -0.84
TVP23C-208ENST00000581273 HAP1P54257 671 aaPredicted RBP9.8□□□□□ -0.84
TVP23C-208ENST00000581273 WAPLQ7Z5K2 1190 aa9.8□□□□□ -0.84
TVP23C-208ENST00000581273 PPLO60437 1756 aa9.8□□□□□ -0.84
TVP23C-208ENST00000581273 USP32Q8NFA0 1604 aa9.79□□□□□ -0.84
TVP23C-208ENST00000581273 EIF5BO60841 1220 aaKnown RBP9.79□□□□□ -0.84
TVP23C-208ENST00000581273 PKNOX2Q96KN3 472 aa9.79□□□□□ -0.84
TVP23C-208ENST00000581273 PRKRIP1Q9H875 184 aaPredicted RBP9.79□□□□□ -0.84
TVP23C-208ENST00000581273 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
TVP23C-208ENST00000581273 HFM1A2PYH4 1435 aa9.79□□□□□ -0.84
TVP23C-208ENST00000581273 PCNTO95613 3336 aa9.79□□□□□ -0.84
TVP23C-208ENST00000581273 PXDNQ92626 1479 aa9.79□□□□□ -0.84
TVP23C-208ENST00000581273 RGL3Q3MIN7 710 aa9.78□□□□□ -0.84
TVP23C-208ENST00000581273 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
TVP23C-208ENST00000581273 NAIPQ13075 1403 aa9.78□□□□□ -0.84
TVP23C-208ENST00000581273 ATP10DQ9P241 1426 aa9.78□□□□□ -0.84
TVP23C-208ENST00000581273 RPGRIP1LQ68CZ1 1315 aa9.78□□□□□ -0.84
TVP23C-208ENST00000581273 RGPD8O14715 1765 aaPredicted RBP9.78□□□□□ -0.84
TVP23C-208ENST00000581273 NWD2Q9ULI1 1742 aa9.77□□□□□ -0.85
TVP23C-208ENST00000581273 ZNF526Q8TF50 670 aaPredicted RBP9.77□□□□□ -0.85
TVP23C-208ENST00000581273 LRPPRCP42704 1394 aaKnown RBP9.76□□□□□ -0.85
TVP23C-208ENST00000581273 CDC42BPGQ6DT37 1551 aa9.76□□□□□ -0.85
TVP23C-208ENST00000581273 APLP1P51693 650 aa9.76□□□□□ -0.85
TVP23C-208ENST00000581273 NUBP1P53384 320 aa9.76□□□□□ -0.85
TVP23C-208ENST00000581273 L1TD1Q5T7N2 865 aaKnown RBP9.76□□□□□ -0.85
TVP23C-208ENST00000581273 TMEM132EQ6IEE7 984 aa9.76□□□□□ -0.85
TVP23C-208ENST00000581273 KRT28Q7Z3Y7 464 aa9.76□□□□□ -0.85
TVP23C-208ENST00000581273 CABLES1Q8TDN4 633 aa9.76□□□□□ -0.85
TVP23C-208ENST00000581273 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
TVP23C-208ENST00000581273 ADGRF5Q8IZF2 1346 aa9.76□□□□□ -0.85
TVP23C-208ENST00000581273 FAM196AQ6ZSG2 479 aa9.75□□□□□ -0.85
TVP23C-208ENST00000581273 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.75□□□□□ -0.85
TVP23C-208ENST00000581273 KTN1Q86UP2 1357 aaKnown RBP9.75□□□□□ -0.85
TVP23C-208ENST00000581273 PLEKHH1Q9ULM0 1364 aa9.75□□□□□ -0.85
TVP23C-208ENST00000581273 HSPA5P11021 654 aaKnown RBP9.74□□□□□ -0.85
TVP23C-208ENST00000581273 PDE4AP27815 886 aa9.74□□□□□ -0.85
TVP23C-208ENST00000581273 PDE3BQ13370 1112 aa9.74□□□□□ -0.85
TVP23C-208ENST00000581273 FAM9BQ8IZU0 186 aa9.74□□□□□ -0.85
TVP23C-208ENST00000581273 BACH2Q9BYV9 841 aa9.74□□□□□ -0.85
TVP23C-208ENST00000581273 SPATA31A3Q5VYP0 1347 aa9.74□□□□□ -0.85
TVP23C-208ENST00000581273 CCDC7Q96M83 1385 aa9.74□□□□□ -0.85
TVP23C-208ENST00000581273 FMN2Q9NZ56 1722 aa9.73□□□□□ -0.85
TVP23C-208ENST00000581273 SAFB2Q14151 953 aaKnown RBP eCLIP9.73□□□□□ -0.854e-8■■□□□ 13.7
TVP23C-208ENST00000581273 THSD7AQ9UPZ6 1657 aa9.73□□□□□ -0.85
TVP23C-208ENST00000581273 HTRA3P83110 453 aa9.72□□□□□ -0.85
TVP23C-208ENST00000581273 NRAPQ86VF7 1730 aa9.72□□□□□ -0.85
TVP23C-208ENST00000581273 IFT172Q9UG01 1749 aa9.72□□□□□ -0.85
TVP23C-208ENST00000581273 ROCK2O75116 1388 aaKnown RBP9.72□□□□□ -0.85
TVP23C-208ENST00000581273 PRAG1Q86YV5 1406 aa9.72□□□□□ -0.85
TVP23C-208ENST00000581273 KIF1AQ12756 1690 aa9.71□□□□□ -0.85
TVP23C-208ENST00000581273 ECM2O94769 699 aaPredicted RBP9.71□□□□□ -0.86
TVP23C-208ENST00000581273 PSME1Q06323 249 aa9.71□□□□□ -0.86
TVP23C-208ENST00000581273 FAM161AQ3B820 660 aa9.71□□□□□ -0.86
TVP23C-208ENST00000581273 SGIP1Q9BQI5 828 aa9.71□□□□□ -0.86
TVP23C-208ENST00000581273 HIRIP3Q9BW71 556 aaPredicted RBP9.71□□□□□ -0.86
TVP23C-208ENST00000581273 PHF8Q9UPP1 1060 aa9.71□□□□□ -0.86
TVP23C-208ENST00000581273 CCDC144AA2RUR9 1427 aa9.71□□□□□ -0.86
TVP23C-208ENST00000581273 TNS2Q63HR2 1409 aa9.71□□□□□ -0.86
TVP23C-208ENST00000581273 RRP9O43818 475 aaKnown RBP9.7□□□□□ -0.86
TVP23C-208ENST00000581273 ARXQ96QS3 562 aa9.7□□□□□ -0.86
TVP23C-208ENST00000581273 LAS1LQ9Y4W2 734 aaKnown RBP9.7□□□□□ -0.86
TVP23C-208ENST00000581273 KNDC1Q76NI1 1749 aa9.7□□□□□ -0.86
TVP23C-208ENST00000581273 NFKBIBQ15653 356 aa9.69□□□□□ -0.86
TVP23C-208ENST00000581273 TNS3Q68CZ2 1445 aa9.69□□□□□ -0.86
TVP23C-208ENST00000581273 NPM2Q86SE8 214 aaKnown RBP9.69□□□□□ -0.86
TVP23C-208ENST00000581273 JMYQ8N9B5 988 aa9.69□□□□□ -0.86
TVP23C-208ENST00000581273 PMFBP1Q8TBY8 1022 aa9.69□□□□□ -0.86
TVP23C-208ENST00000581273 KLRG1Q96E93 195 aa9.69□□□□□ -0.86
TVP23C-208ENST00000581273 ABCC11Q96J66 1382 aa9.69□□□□□ -0.86
TVP23C-208ENST00000581273 YTHDC2Q9H6S0 1430 aaKnown RBP9.69□□□□□ -0.86
TVP23C-208ENST00000581273 BTG4Q9NY30 223 aa9.69□□□□□ -0.86
TVP23C-208ENST00000581273 ABCA3Q99758 1704 aa9.68□□□□□ -0.86
TVP23C-208ENST00000581273 TECPR2O15040 1411 aa9.68□□□□□ -0.86
TVP23C-208ENST00000581273 SPATA31A5Q5VU36 1347 aa9.68□□□□□ -0.86
TVP23C-208ENST00000581273 SPATA31A7Q8IWB4 1347 aa9.68□□□□□ -0.86
TVP23C-208ENST00000581273 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
TVP23C-208ENST00000581273 INSRP06213 1382 aa9.67□□□□□ -0.86
TVP23C-208ENST00000581273 ANKRD30BQ9BXX2 1392 aa9.67□□□□□ -0.86
TVP23C-208ENST00000581273 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
TVP23C-208ENST00000581273 YBX3P16989 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
TVP23C-208ENST00000581273 RRP1P56182 461 aaKnown RBP9.67□□□□□ -0.86
TVP23C-208ENST00000581273 PRAM1Q96QH2 718 aa9.67□□□□□ -0.86
TVP23C-208ENST00000581273 BCL11BQ9C0K0 894 aaPredicted RBP9.67□□□□□ -0.86
TVP23C-208ENST00000581273 POGKQ9P215 609 aa9.67□□□□□ -0.86
TVP23C-208ENST00000581273 BRPF3Q9ULD4 1205 aa9.67□□□□□ -0.86
TVP23C-208ENST00000581273 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
TVP23C-208ENST00000581273 WDR90Q96KV7 1748 aa9.67□□□□□ -0.86
TVP23C-208ENST00000581273 MAP3K5Q99683 1374 aa9.66□□□□□ -0.86
TVP23C-208ENST00000581273 KIF3CO14782 793 aa9.66□□□□□ -0.86
TVP23C-208ENST00000581273 CFAP70Q5T0N1 1121 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms