RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
GGA3-209ENST00000580646 BRWD3Q6RI45 1802 aa13.69□□□□□ -0.22
GGA3-209ENST00000580646 KIF20BQ96Q89 1820 aa13.69□□□□□ -0.22
GGA3-209ENST00000580646 FAM182BQ5T319 152 aa13.69□□□□□ -0.22
GGA3-209ENST00000580646 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
GGA3-209ENST00000580646 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
GGA3-209ENST00000580646 NME9Q86XW9 330 aa13.68□□□□□ -0.22
GGA3-209ENST00000580646 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
GGA3-209ENST00000580646 THRAP3Q9Y2W1 955 aaKnown RBP13.68□□□□□ -0.22
GGA3-209ENST00000580646 LMO7Q8WWI1 1683 aa13.68□□□□□ -0.22
GGA3-209ENST00000580646 USP31Q70CQ4 1352 aa13.68□□□□□ -0.22
GGA3-209ENST00000580646 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
GGA3-209ENST00000580646 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
GGA3-209ENST00000580646 CCDC7Q96M83 1385 aa13.67□□□□□ -0.22
GGA3-209ENST00000580646 PDE3BQ13370 1112 aa13.66□□□□□ -0.22
GGA3-209ENST00000580646 TOM1L2Q6ZVM7 507 aa13.66□□□□□ -0.22
GGA3-209ENST00000580646 ANKRD26Q9UPS8 1709 aa13.66□□□□□ -0.22
GGA3-209ENST00000580646 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
GGA3-209ENST00000580646 CRB1P82279 1406 aa13.65□□□□□ -0.22
GGA3-209ENST00000580646 WASHC2AQ641Q2 1341 aa13.64□□□□□ -0.23
GGA3-209ENST00000580646 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
GGA3-209ENST00000580646 BAG6P46379 1132 aa13.64□□□□□ -0.23
GGA3-209ENST00000580646 FAM196AQ6ZSG2 479 aa13.64□□□□□ -0.23
GGA3-209ENST00000580646 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
GGA3-209ENST00000580646 LRP5O75197 1615 aa13.63□□□□□ -0.23
GGA3-209ENST00000580646 NFAT5O94916 1531 aa13.63□□□□□ -0.23
GGA3-209ENST00000580646 CARD10Q9BWT7 1032 aa13.62□□□□□ -0.23
GGA3-209ENST00000580646 OVOS2A0A0J9YW53 1432 aa13.62□□□□□ -0.23
GGA3-209ENST00000580646 OVOS2Q6IE36 1432 aa13.62□□□□□ -0.23
GGA3-209ENST00000580646 COL18A1P39060 1754 aa13.61□□□□□ -0.23
GGA3-209ENST00000580646 TRIM37O94972 964 aa13.61□□□□□ -0.23
GGA3-209ENST00000580646 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
GGA3-209ENST00000580646 EN1Q05925 392 aaPredicted RBP13.6□□□□□ -0.23
GGA3-209ENST00000580646 COG3Q96JB2 828 aa13.6□□□□□ -0.23
GGA3-209ENST00000580646 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
GGA3-209ENST00000580646 LTN1O94822 1766 aa13.6□□□□□ -0.23
GGA3-209ENST00000580646 ABCC6O95255 1503 aa13.59□□□□□ -0.23
GGA3-209ENST00000580646 DDB1Q16531 1140 aa13.59□□□□□ -0.23
GGA3-209ENST00000580646 CDCA7Q9BWT1 371 aaPredicted RBP13.59□□□□□ -0.23
GGA3-209ENST00000580646 CARD14Q9BXL6 1004 aa13.59□□□□□ -0.23
GGA3-209ENST00000580646 PANK3Q9H999 370 aa13.59□□□□□ -0.23
GGA3-209ENST00000580646 NSD2O96028 1365 aa13.58□□□□□ -0.23
GGA3-209ENST00000580646 ERBB3P21860 1342 aa13.58□□□□□ -0.24
GGA3-209ENST00000580646 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.24
GGA3-209ENST00000580646 FYB1O15117 783 aa13.57□□□□□ -0.24
GGA3-209ENST00000580646 APBA3O96018 575 aa13.57□□□□□ -0.24
GGA3-209ENST00000580646 IP6K1Q92551 441 aa13.57□□□□□ -0.24
GGA3-209ENST00000580646 NLRP2Q9NX02 1062 aa13.57□□□□□ -0.24
GGA3-209ENST00000580646 FBLN1P23142 703 aa13.56□□□□□ -0.24
GGA3-209ENST00000580646 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
GGA3-209ENST00000580646 ANKRD24Q8TF21 1146 aa13.56□□□□□ -0.24
GGA3-209ENST00000580646 NPC1L1Q9UHC9 1359 aa13.56□□□□□ -0.24
GGA3-209ENST00000580646 DISP2A7MBM2 1401 aa13.56□□□□□ -0.24
GGA3-209ENST00000580646 PSDA5PKW4 1024 aaPredicted RBP13.55□□□□□ -0.24
GGA3-209ENST00000580646 EXOC5O00471 708 aa13.55□□□□□ -0.24
GGA3-209ENST00000580646 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
GGA3-209ENST00000580646 CAMKK2Q96RR4 588 aa13.55□□□□□ -0.24
GGA3-209ENST00000580646 GGNBP2Q9H3C7 697 aa13.55□□□□□ -0.24
GGA3-209ENST00000580646 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
GGA3-209ENST00000580646 PARP4Q9UKK3 1724 aaKnown RBP13.54□□□□□ -0.24
GGA3-209ENST00000580646 AMPHP49418 695 aa13.54□□□□□ -0.24
GGA3-209ENST00000580646 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
GGA3-209ENST00000580646 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
GGA3-209ENST00000580646 OVOS2A0A0G2JMS6 1433 aa13.54□□□□□ -0.24
GGA3-209ENST00000580646 RGPD1P0DJD0 1748 aa13.53□□□□□ -0.24
GGA3-209ENST00000580646 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
GGA3-209ENST00000580646 KNSTRNQ9Y448 316 aa13.53□□□□□ -0.24
GGA3-209ENST00000580646 RGPD5Q99666 1765 aa13.53□□□□□ -0.24
GGA3-209ENST00000580646 IL2RBP14784 551 aa13.52□□□□□ -0.25
GGA3-209ENST00000580646 HOXC9P31274 260 aa13.52□□□□□ -0.25
GGA3-209ENST00000580646 FAM208AQ9UK61 1670 aaKnown RBP13.51□□□□□ -0.25
GGA3-209ENST00000580646 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
GGA3-209ENST00000580646 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
GGA3-209ENST00000580646 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
GGA3-209ENST00000580646 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
GGA3-209ENST00000580646 LRRC37A3O60309 1634 aa13.5□□□□□ -0.25
GGA3-209ENST00000580646 ZNF316A6NFI3 1004 aaPredicted RBP13.5□□□□□ -0.25
GGA3-209ENST00000580646 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
GGA3-209ENST00000580646 TNS1Q9HBL0 1735 aaKnown RBP13.5□□□□□ -0.25
GGA3-209ENST00000580646 BCL9O00512 1426 aa13.49□□□□□ -0.25
GGA3-209ENST00000580646 RTL1A6NKG5 1358 aa13.49□□□□□ -0.25
GGA3-209ENST00000580646 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
GGA3-209ENST00000580646 PLSCR1O15162 318 aa13.48□□□□□ -0.25
GGA3-209ENST00000580646 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
GGA3-209ENST00000580646 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
GGA3-209ENST00000580646 PEAK1Q9H792 1746 aa13.47□□□□□ -0.25
GGA3-209ENST00000580646 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
GGA3-209ENST00000580646 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
GGA3-209ENST00000580646 NBPF14Q5TI25 921 aa13.46□□□□□ -0.25
GGA3-209ENST00000580646 KCNQ2O43526 872 aa13.45□□□□□ -0.26
GGA3-209ENST00000580646 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
GGA3-209ENST00000580646 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
GGA3-209ENST00000580646 WNK3Q9BYP7 1800 aa13.45□□□□□ -0.26
GGA3-209ENST00000580646 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
GGA3-209ENST00000580646 ACSBG1Q96GR2 724 aa13.44□□□□□ -0.26
GGA3-209ENST00000580646 EMILIN1Q9Y6C2 1016 aa13.44□□□□□ -0.26
GGA3-209ENST00000580646 INSRP06213 1382 aa13.44□□□□□ -0.26
GGA3-209ENST00000580646 FLT4P35916 1363 aa13.44□□□□□ -0.26
GGA3-209ENST00000580646 YY1P25490 414 aa13.43□□□□□ -0.26
GGA3-209ENST00000580646 DDX10Q13206 875 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms