RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 PTF1AQ7RTS3 328 aa16.79■□□□□ 0.28
CCDC84-209ENST00000580556 ZNF784Q8NCA9 323 aaPredicted RBP16.79■□□□□ 0.28
CCDC84-209ENST00000580556 UTRNP46939 3433 aa16.79■□□□□ 0.28
CCDC84-209ENST00000580556 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
CCDC84-209ENST00000580556 CABP1Q9NZU7 370 aa16.78■□□□□ 0.28
CCDC84-209ENST00000580556 CASZ1Q86V15 1759 aa16.78■□□□□ 0.28
CCDC84-209ENST00000580556 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
CCDC84-209ENST00000580556 LMO7Q8WWI1 1683 aa16.78■□□□□ 0.28
CCDC84-209ENST00000580556 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
CCDC84-209ENST00000580556 AKAP12Q02952 1782 aa16.77■□□□□ 0.27
CCDC84-209ENST00000580556 BRD4O60885 1362 aaPredicted RBP16.77■□□□□ 0.27
CCDC84-209ENST00000580556 PEAK1Q9H792 1746 aa16.76■□□□□ 0.27
CCDC84-209ENST00000580556 PARP4Q9UKK3 1724 aaKnown RBP16.76■□□□□ 0.27
CCDC84-209ENST00000580556 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
CCDC84-209ENST00000580556 TERF2IPQ9NYB0 399 aa16.76■□□□□ 0.27
CCDC84-209ENST00000580556 SBF2Q86WG5 1849 aa16.75■□□□□ 0.27
CCDC84-209ENST00000580556 ACEP12821 1306 aa16.75■□□□□ 0.27
CCDC84-209ENST00000580556 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
CCDC84-209ENST00000580556 SLC12A5Q9H2X9 1139 aa16.75■□□□□ 0.27
CCDC84-209ENST00000580556 MON2Q7Z3U7 1717 aa16.75■□□□□ 0.27
CCDC84-209ENST00000580556 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
CCDC84-209ENST00000580556 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
CCDC84-209ENST00000580556 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
CCDC84-209ENST00000580556 USP6P35125 1406 aa16.73■□□□□ 0.27
CCDC84-209ENST00000580556 SENP3-EIF4A1A0A087X0R7 540 aa16.73■□□□□ 0.27
CCDC84-209ENST00000580556 PTGER2P43116 358 aa16.73■□□□□ 0.27
CCDC84-209ENST00000580556 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
CCDC84-209ENST00000580556 PROM2Q8N271 834 aa16.73■□□□□ 0.27
CCDC84-209ENST00000580556 ABTB2Q8N961 1025 aa16.73■□□□□ 0.27
CCDC84-209ENST00000580556 POLR3GLQ9BT43 218 aa16.73■□□□□ 0.27
CCDC84-209ENST00000580556 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
CCDC84-209ENST00000580556 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
CCDC84-209ENST00000580556 PLSCR1O15162 318 aa16.72■□□□□ 0.27
CCDC84-209ENST00000580556 CPDO75976 1380 aa16.72■□□□□ 0.27
CCDC84-209ENST00000580556 COL5A2P05997 1499 aaPredicted RBP16.72■□□□□ 0.27
CCDC84-209ENST00000580556 RGPD3A6NKT7 1758 aaPredicted RBP16.72■□□□□ 0.27
CCDC84-209ENST00000580556 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
CCDC84-209ENST00000580556 OVOS2A0A0G2JMS6 1433 aa16.71■□□□□ 0.27
CCDC84-209ENST00000580556 OVOS2A0A0J9YW53 1432 aa16.71■□□□□ 0.27
CCDC84-209ENST00000580556 OVOS2Q6IE36 1432 aa16.71■□□□□ 0.27
CCDC84-209ENST00000580556 KTN1Q86UP2 1357 aaKnown RBP16.71■□□□□ 0.27
CCDC84-209ENST00000580556 USP19O94966 1318 aa16.7■□□□□ 0.26
CCDC84-209ENST00000580556 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
CCDC84-209ENST00000580556 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
CCDC84-209ENST00000580556 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
CCDC84-209ENST00000580556 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
CCDC84-209ENST00000580556 GCP02774 474 aa16.69■□□□□ 0.26
CCDC84-209ENST00000580556 SYT17Q9BSW7 474 aa16.69■□□□□ 0.26
CCDC84-209ENST00000580556 CRB1P82279 1406 aa16.68■□□□□ 0.26
CCDC84-209ENST00000580556 C1QTNF8P60827 252 aa16.67■□□□□ 0.26
CCDC84-209ENST00000580556 DDB1Q16531 1140 aa16.67■□□□□ 0.26
CCDC84-209ENST00000580556 PANK3Q9H999 370 aa16.67■□□□□ 0.26
CCDC84-209ENST00000580556 NSD3Q9BZ95 1437 aa16.67■□□□□ 0.26
CCDC84-209ENST00000580556 TTC21AQ8NDW8 1320 aa16.67■□□□□ 0.26
CCDC84-209ENST00000580556 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
CCDC84-209ENST00000580556 CHD4Q14839 1912 aa16.65■□□□□ 0.26
CCDC84-209ENST00000580556 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
CCDC84-209ENST00000580556 CARD14Q9BXL6 1004 aa16.65■□□□□ 0.26
CCDC84-209ENST00000580556 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
CCDC84-209ENST00000580556 TTC21BQ7Z4L5 1316 aa16.65■□□□□ 0.26
CCDC84-209ENST00000580556 TXNRD1Q16881 649 aa16.64■□□□□ 0.25
CCDC84-209ENST00000580556 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
CCDC84-209ENST00000580556 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 TOM1L2Q6ZVM7 507 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 SGIP1Q9BQI5 828 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 CGNL1Q0VF96 1302 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 NSD2O96028 1365 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 NPC1L1Q9UHC9 1359 aa16.63■□□□□ 0.25
CCDC84-209ENST00000580556 AXIN2Q9Y2T1 843 aa16.62■□□□□ 0.25
CCDC84-209ENST00000580556 COL18A1P39060 1754 aa16.61■□□□□ 0.25
CCDC84-209ENST00000580556 KIF20BQ96Q89 1820 aa16.61■□□□□ 0.25
CCDC84-209ENST00000580556 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
CCDC84-209ENST00000580556 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
CCDC84-209ENST00000580556 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
CCDC84-209ENST00000580556 AATKQ6ZMQ8 1374 aa16.61■□□□□ 0.25
CCDC84-209ENST00000580556 USP31Q70CQ4 1352 aa16.61■□□□□ 0.25
CCDC84-209ENST00000580556 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
CCDC84-209ENST00000580556 NLRP6P59044 892 aa16.58■□□□□ 0.24
CCDC84-209ENST00000580556 AMER1Q5JTC6 1135 aaPredicted RBP16.58■□□□□ 0.24
CCDC84-209ENST00000580556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC84-209ENST00000580556 SLIT3O75094 1523 aa16.58■□□□□ 0.24
CCDC84-209ENST00000580556 ANKRD26Q9UPS8 1709 aa16.58■□□□□ 0.24
CCDC84-209ENST00000580556 RGPD5Q99666 1765 aa16.58■□□□□ 0.24
CCDC84-209ENST00000580556 BCL9O00512 1426 aa16.57■□□□□ 0.24
CCDC84-209ENST00000580556 WDR17Q8IZU2 1322 aa16.57■□□□□ 0.24
CCDC84-209ENST00000580556 FYB1O15117 783 aa16.57■□□□□ 0.24
CCDC84-209ENST00000580556 ARXQ96QS3 562 aa16.57■□□□□ 0.24
CCDC84-209ENST00000580556 NME9Q86XW9 330 aa16.56■□□□□ 0.24
CCDC84-209ENST00000580556 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
CCDC84-209ENST00000580556 SOX12O15370 315 aa16.53■□□□□ 0.24
CCDC84-209ENST00000580556 GPR162Q16538 588 aa16.53■□□□□ 0.24
CCDC84-209ENST00000580556 ZNF827Q17R98 1081 aa16.53■□□□□ 0.24
CCDC84-209ENST00000580556 COG3Q96JB2 828 aa16.53■□□□□ 0.24
CCDC84-209ENST00000580556 PAPPAQ13219 1627 aa16.52■□□□□ 0.24
CCDC84-209ENST00000580556 EXOC5O00471 708 aa16.52■□□□□ 0.24
CCDC84-209ENST00000580556 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.24
CCDC84-209ENST00000580556 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms