RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 EVA1CP58658 441 aa19.18■□□□□ 0.66
SKA2-205ENST00000580541 EMILIN1Q9Y6C2 1016 aa19.18■□□□□ 0.66
SKA2-205ENST00000580541 HOXC9P31274 260 aa19.17■□□□□ 0.66
SKA2-205ENST00000580541 NUDCQ9Y266 331 aa19.17■□□□□ 0.66
SKA2-205ENST00000580541 CHRNA2Q15822 529 aa19.16■□□□□ 0.66
SKA2-205ENST00000580541 ABCA3Q99758 1704 aa19.16■□□□□ 0.66
SKA2-205ENST00000580541 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
SKA2-205ENST00000580541 ABCC6O95255 1503 aa19.15■□□□□ 0.66
SKA2-205ENST00000580541 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
SKA2-205ENST00000580541 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
SKA2-205ENST00000580541 INSRP06213 1382 aa19.15■□□□□ 0.66
SKA2-205ENST00000580541 LTN1O94822 1766 aa19.14■□□□□ 0.66
SKA2-205ENST00000580541 DIAPH1O60610 1272 aaKnown RBP19.14■□□□□ 0.65
SKA2-205ENST00000580541 SMG6Q86US8 1419 aaKnown RBP19.14■□□□□ 0.65
SKA2-205ENST00000580541 HSP90AB2PQ58FF8 381 aa19.13■□□□□ 0.65
SKA2-205ENST00000580541 BTG4Q9NY30 223 aa19.13■□□□□ 0.65
SKA2-205ENST00000580541 CDK12Q9NYV4 1490 aaPredicted RBP19.13■□□□□ 0.65
SKA2-205ENST00000580541 COL14A1Q05707 1796 aaKnown RBP19.12■□□□□ 0.65
SKA2-205ENST00000580541 CSB-PGBD3P0DP91 1061 aa19.12■□□□□ 0.65
SKA2-205ENST00000580541 FNBP4Q8N3X1 1017 aaPredicted RBP19.12■□□□□ 0.65
SKA2-205ENST00000580541 MIER1Q8N108 512 aa19.11■□□□□ 0.65
SKA2-205ENST00000580541 ANKRD24Q8TF21 1146 aa19.11■□□□□ 0.65
SKA2-205ENST00000580541 AXIN2Q9Y2T1 843 aa19.11■□□□□ 0.65
SKA2-205ENST00000580541 MRS2Q9HD23 443 aa19.1■□□□□ 0.65
SKA2-205ENST00000580541 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
SKA2-205ENST00000580541 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
SKA2-205ENST00000580541 PNNQ9H307 717 aaKnown RBP19.08■□□□□ 0.64
SKA2-205ENST00000580541 STRN4Q9NRL3 753 aa19.08■□□□□ 0.64
SKA2-205ENST00000580541 USP21Q9UK80 565 aa19.08■□□□□ 0.64
SKA2-205ENST00000580541 LRP6O75581 1613 aa19.07■□□□□ 0.64
SKA2-205ENST00000580541 ERBB3P21860 1342 aa19.07■□□□□ 0.64
SKA2-205ENST00000580541 COL18A1P39060 1754 aa19.07■□□□□ 0.64
SKA2-205ENST00000580541 EIF4A2Q14240 407 aaKnown RBP19.07■□□□□ 0.64
SKA2-205ENST00000580541 WDR43Q15061 677 aaKnown RBP eCLIP19.07■□□□□ 0.64
SKA2-205ENST00000580541 ZNF772Q68DY9 489 aaPredicted RBP19.07■□□□□ 0.64
SKA2-205ENST00000580541 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
SKA2-205ENST00000580541 WDR17Q8IZU2 1322 aa19.06■□□□□ 0.64
SKA2-205ENST00000580541 IL13P35225 146 aa19.06■□□□□ 0.64
SKA2-205ENST00000580541 NLRP2Q9NX02 1062 aa19.06■□□□□ 0.64
SKA2-205ENST00000580541 AFF2P51816 1311 aa19.05■□□□□ 0.64
SKA2-205ENST00000580541 CAMTA1Q9Y6Y1 1673 aa19.05■□□□□ 0.64
SKA2-205ENST00000580541 U2SURPO15042 1029 aaKnown RBP19.05■□□□□ 0.64
SKA2-205ENST00000580541 PEAK1Q9H792 1746 aa19.05■□□□□ 0.64
SKA2-205ENST00000580541 NWD2Q9ULI1 1742 aa19.05■□□□□ 0.64
SKA2-205ENST00000580541 SLIT2O94813 1529 aa19.05■□□□□ 0.64
SKA2-205ENST00000580541 CARD10Q9BWT7 1032 aa19.04■□□□□ 0.64
SKA2-205ENST00000580541 CCDC9Q9Y3X0 531 aaKnown RBP19.04■□□□□ 0.64
SKA2-205ENST00000580541 LMO7Q8WWI1 1683 aa19.04■□□□□ 0.64
SKA2-205ENST00000580541 COL5A2P05997 1499 aaPredicted RBP19.03■□□□□ 0.64
SKA2-205ENST00000580541 NEFMP07197 916 aa19.03■□□□□ 0.64
SKA2-205ENST00000580541 U2AF1L5P0DN76 240 aaPredicted RBP19.03■□□□□ 0.64
SKA2-205ENST00000580541 U2AF1Q01081 240 aaKnown RBP eCLIP19.03■□□□□ 0.641e-7■□□□□ 9.5
SKA2-205ENST00000580541 TRPC5Q9UL62 973 aaPredicted RBP19.03■□□□□ 0.64
SKA2-205ENST00000580541 RGPD5Q99666 1765 aa19.03■□□□□ 0.64
SKA2-205ENST00000580541 VPS72Q15906 364 aa19.02■□□□□ 0.64
SKA2-205ENST00000580541 EYA1Q99502 592 aa19.02■□□□□ 0.64
SKA2-205ENST00000580541 THRAP3Q9Y2W1 955 aaKnown RBP19.02■□□□□ 0.64
SKA2-205ENST00000580541 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
SKA2-205ENST00000580541 PLCH1Q4KWH8 1693 aa19.01■□□□□ 0.63
SKA2-205ENST00000580541 CRB1P82279 1406 aa19■□□□□ 0.63
SKA2-205ENST00000580541 FCHSD2O94868 740 aa19■□□□□ 0.63
SKA2-205ENST00000580541 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
SKA2-205ENST00000580541 PNISRQ8TF01 805 aaKnown RBP19■□□□□ 0.63
SKA2-205ENST00000580541 NBPF4Q96M43 638 aa19■□□□□ 0.63
SKA2-205ENST00000580541 QTRT2Q9H974 415 aaKnown RBP19■□□□□ 0.63
SKA2-205ENST00000580541 FAM208AQ9UK61 1670 aaKnown RBP19■□□□□ 0.63
SKA2-205ENST00000580541 BCL9LQ86UU0 1499 aa18.99■□□□□ 0.63
SKA2-205ENST00000580541 TCP11L2Q8N4U5 519 aa18.99■□□□□ 0.63
SKA2-205ENST00000580541 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
SKA2-205ENST00000580541 IGSF1Q8N6C5 1336 aa18.99■□□□□ 0.63
SKA2-205ENST00000580541 COL3A1P02461 1466 aaPredicted RBP18.98■□□□□ 0.63
SKA2-205ENST00000580541 SULT6B1Q6IMI4 303 aa18.98■□□□□ 0.63
SKA2-205ENST00000580541 RAPGEF4Q8WZA2 1011 aa18.98■□□□□ 0.63
SKA2-205ENST00000580541 SPATA31A5Q5VU36 1347 aa18.98■□□□□ 0.63
SKA2-205ENST00000580541 SPATA31A7Q8IWB4 1347 aa18.98■□□□□ 0.63
SKA2-205ENST00000580541 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
SKA2-205ENST00000580541 SPATA31A1Q5TZJ5 1347 aa18.97■□□□□ 0.63
SKA2-205ENST00000580541 GJD4Q96KN9 370 aaPredicted RBP18.96■□□□□ 0.63
SKA2-205ENST00000580541 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
SKA2-205ENST00000580541 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.96■□□□□ 0.63
SKA2-205ENST00000580541 TATP17735 454 aaPredicted RBP18.95■□□□□ 0.62
SKA2-205ENST00000580541 BARGINQ6ZT62 677 aa18.95■□□□□ 0.62
SKA2-205ENST00000580541 FAM9BQ8IZU0 186 aa18.95■□□□□ 0.62
SKA2-205ENST00000580541 ADAMTS8Q9UP79 889 aa18.95■□□□□ 0.62
SKA2-205ENST00000580541 HMOX1P09601 288 aa18.94■□□□□ 0.62
SKA2-205ENST00000580541 IL2RBP14784 551 aa18.94■□□□□ 0.62
SKA2-205ENST00000580541 NRAPQ86VF7 1730 aa18.94■□□□□ 0.62
SKA2-205ENST00000580541 KDRP35968 1356 aa18.93■□□□□ 0.62
SKA2-205ENST00000580541 PLEKHG2Q9H7P9 1386 aa18.93■□□□□ 0.62
SKA2-205ENST00000580541 RBM6P78332 1123 aaKnown RBP18.92■□□□□ 0.62
SKA2-205ENST00000580541 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
SKA2-205ENST00000580541 PLEKHO1Q53GL0 409 aaPredicted RBP18.92■□□□□ 0.62
SKA2-205ENST00000580541 USHBP1Q8N6Y0 703 aa18.92■□□□□ 0.62
SKA2-205ENST00000580541 MAPK8IP3Q9UPT6 1336 aa18.92■□□□□ 0.62
SKA2-205ENST00000580541 ATRNO75882 1429 aa18.91■□□□□ 0.62
SKA2-205ENST00000580541 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
SKA2-205ENST00000580541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.91■□□□□ 0.62
SKA2-205ENST00000580541 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
SKA2-205ENST00000580541 RXRBP28702 533 aa18.9■□□□□ 0.62
SKA2-205ENST00000580541 PRKAR2BP31323 418 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms