RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 FAM83GA6ND36 823 aa14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.161e-8■□□□□ 9.6
CDK5RAP3-214ENST00000579632 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 AXIN2Q9Y2T1 843 aa14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 COL3A1P02461 1466 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 COL22A1Q8NFW1 1626 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-214ENST00000579632 ABCC6O95255 1503 aa14.02□□□□□ -0.16
CDK5RAP3-214ENST00000579632 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-214ENST00000579632 MARF1Q9Y4F3 1742 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-214ENST00000579632 FCHSD2O94868 740 aa14.01□□□□□ -0.17
CDK5RAP3-214ENST00000579632 ANKRD24Q8TF21 1146 aa14.01□□□□□ -0.17
CDK5RAP3-214ENST00000579632 ERBB3P21860 1342 aa14□□□□□ -0.17
CDK5RAP3-214ENST00000579632 ADAMTS2O95450 1211 aa14□□□□□ -0.17
CDK5RAP3-214ENST00000579632 LTV1Q96GA3 475 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-214ENST00000579632 IGSF1Q8N6C5 1336 aa13.99□□□□□ -0.17
CDK5RAP3-214ENST00000579632 EYA1Q99502 592 aa13.99□□□□□ -0.17
CDK5RAP3-214ENST00000579632 PHRF1Q9P1Y6 1649 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-214ENST00000579632 CSB-PGBD3P0DP91 1061 aa13.98□□□□□ -0.17
CDK5RAP3-214ENST00000579632 EVA1CP58658 441 aa13.98□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NEFMP07197 916 aa13.97□□□□□ -0.17
CDK5RAP3-214ENST00000579632 SULT6B1Q6IMI4 303 aa13.97□□□□□ -0.17
CDK5RAP3-214ENST00000579632 BTG4Q9NY30 223 aa13.97□□□□□ -0.17
CDK5RAP3-214ENST00000579632 PEAK1Q9H792 1746 aa13.97□□□□□ -0.17
CDK5RAP3-214ENST00000579632 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 SHPRHQ149N8 1683 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 KDRP35968 1356 aa13.96□□□□□ -0.18
CDK5RAP3-214ENST00000579632 HMOX1P09601 288 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 FNBP4Q8N3X1 1017 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 PLEKHF1Q96S99 279 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NLRP2Q9NX02 1062 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 TOM1L2Q6ZVM7 507 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 MAPK8IP3Q9UPT6 1336 aa13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NCAPD2Q15021 1401 aa13.92□□□□□ -0.18
CDK5RAP3-214ENST00000579632 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDK5RAP3-214ENST00000579632 LARP1Q6PKG0 1096 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-214ENST00000579632 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
CDK5RAP3-214ENST00000579632 SLIT2O94813 1529 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 ABCA3Q99758 1704 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 APAF1O14727 1248 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 RAPGEF4Q8WZA2 1011 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 CRB1P82279 1406 aa13.9□□□□□ -0.18
CDK5RAP3-214ENST00000579632 LRP6O75581 1613 aa13.9□□□□□ -0.18
CDK5RAP3-214ENST00000579632 YTHDC1Q96MU7 727 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-214ENST00000579632 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-214ENST00000579632 LTN1O94822 1766 aa13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 COL18A1P39060 1754 aa13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 AMOTQ4VCS5 1084 aa13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 USP21Q9UK80 565 aa13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 THRAP3Q9Y2W1 955 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 TMPOP42166 694 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-214ENST00000579632 VPS72Q15906 364 aa13.88□□□□□ -0.19
CDK5RAP3-214ENST00000579632 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
CDK5RAP3-214ENST00000579632 PHACTR3Q96KR7 559 aa13.88□□□□□ -0.19
CDK5RAP3-214ENST00000579632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.191e-11■□□□□ 11
CDK5RAP3-214ENST00000579632 IL2RBP14784 551 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 TATP17735 454 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 CCDC27Q2M243 656 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 PLEKHO1Q53GL0 409 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 SPATA31A1Q5TZJ5 1347 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 SPATA31A5Q5VU36 1347 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 SPATA31A7Q8IWB4 1347 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 LMOD3Q0VAK6 560 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 SPG7Q9UQ90 795 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 RGPD1P0DJD0 1748 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 AFF2P51816 1311 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 RIPK4P57078 832 aa13.85□□□□□ -0.19
CDK5RAP3-214ENST00000579632 MTHFSDQ2M296 383 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-214ENST00000579632 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
CDK5RAP3-214ENST00000579632 USP35Q9P2H5 1018 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms