RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 SLIT3O75094 1523 aa16.62■□□□□ 0.25
SUPT4H1-203ENST00000579289 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
SUPT4H1-203ENST00000579289 AXIN2Q9Y2T1 843 aa16.62■□□□□ 0.25
SUPT4H1-203ENST00000579289 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
SUPT4H1-203ENST00000579289 PAPPAQ13219 1627 aa16.62■□□□□ 0.25
SUPT4H1-203ENST00000579289 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
SUPT4H1-203ENST00000579289 TXNRD1Q16881 649 aa16.61■□□□□ 0.25
SUPT4H1-203ENST00000579289 ABTB2Q8N961 1025 aa16.61■□□□□ 0.25
SUPT4H1-203ENST00000579289 MAP3K5Q99683 1374 aa16.61■□□□□ 0.25
SUPT4H1-203ENST00000579289 DDB1Q16531 1140 aa16.58■□□□□ 0.24
SUPT4H1-203ENST00000579289 MTFR1LQ9H019 292 aa16.58■□□□□ 0.24
SUPT4H1-203ENST00000579289 COL24A1Q17RW2 1714 aa16.57■□□□□ 0.24
SUPT4H1-203ENST00000579289 DCAF11Q8TEB1 546 aa16.57■□□□□ 0.24
SUPT4H1-203ENST00000579289 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
SUPT4H1-203ENST00000579289 NLRP13Q86W25 1043 aa16.56■□□□□ 0.24
SUPT4H1-203ENST00000579289 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
SUPT4H1-203ENST00000579289 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
SUPT4H1-203ENST00000579289 WDR17Q8IZU2 1322 aa16.54■□□□□ 0.24
SUPT4H1-203ENST00000579289 PIK3C2AO00443 1686 aa16.54■□□□□ 0.24
SUPT4H1-203ENST00000579289 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
SUPT4H1-203ENST00000579289 STAC3Q96MF2 364 aa16.53■□□□□ 0.24
SUPT4H1-203ENST00000579289 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
SUPT4H1-203ENST00000579289 RGPD5Q99666 1765 aa16.52■□□□□ 0.24
SUPT4H1-203ENST00000579289 ARXQ96QS3 562 aa16.52■□□□□ 0.24
SUPT4H1-203ENST00000579289 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
SUPT4H1-203ENST00000579289 NHSQ6T4R5 1651 aa16.52■□□□□ 0.23
SUPT4H1-203ENST00000579289 USP6P35125 1406 aa16.52■□□□□ 0.23
SUPT4H1-203ENST00000579289 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
SUPT4H1-203ENST00000579289 ARHGEF25Q86VW2 580 aa16.51■□□□□ 0.23
SUPT4H1-203ENST00000579289 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
SUPT4H1-203ENST00000579289 TOM1L2Q6ZVM7 507 aa16.5■□□□□ 0.23
SUPT4H1-203ENST00000579289 CARD10Q9BWT7 1032 aa16.5■□□□□ 0.23
SUPT4H1-203ENST00000579289 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
SUPT4H1-203ENST00000579289 CPSF1Q10570 1443 aaKnown RBP16.49■□□□□ 0.23
SUPT4H1-203ENST00000579289 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
SUPT4H1-203ENST00000579289 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
SUPT4H1-203ENST00000579289 NBPF1Q3BBV0 1214 aa16.48■□□□□ 0.23
SUPT4H1-203ENST00000579289 RAB3GAP2Q9H2M9 1393 aa16.48■□□□□ 0.23
SUPT4H1-203ENST00000579289 NFAT5O94916 1531 aa16.47■□□□□ 0.23
SUPT4H1-203ENST00000579289 NLRP6P59044 892 aa16.47■□□□□ 0.23
SUPT4H1-203ENST00000579289 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
SUPT4H1-203ENST00000579289 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
SUPT4H1-203ENST00000579289 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
SUPT4H1-203ENST00000579289 CABP1Q9NZU7 370 aa16.46■□□□□ 0.23
SUPT4H1-203ENST00000579289 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
SUPT4H1-203ENST00000579289 BTAF1O14981 1849 aa16.44■□□□□ 0.22
SUPT4H1-203ENST00000579289 ABCC6O95255 1503 aa16.44■□□□□ 0.22
SUPT4H1-203ENST00000579289 GIGYF1O75420 1035 aaPredicted RBP16.43■□□□□ 0.22
SUPT4H1-203ENST00000579289 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
SUPT4H1-203ENST00000579289 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
SUPT4H1-203ENST00000579289 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
SUPT4H1-203ENST00000579289 EXOC5O00471 708 aa16.42■□□□□ 0.22
SUPT4H1-203ENST00000579289 YBX3P16989 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
SUPT4H1-203ENST00000579289 ACSBG1Q96GR2 724 aa16.41■□□□□ 0.22
SUPT4H1-203ENST00000579289 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
SUPT4H1-203ENST00000579289 CCDC7Q96M83 1385 aa16.4■□□□□ 0.22
SUPT4H1-203ENST00000579289 SRPK2P78362 688 aaKnown RBP16.4■□□□□ 0.22
SUPT4H1-203ENST00000579289 GPR162Q16538 588 aa16.4■□□□□ 0.22
SUPT4H1-203ENST00000579289 TTC21BQ7Z4L5 1316 aa16.4■□□□□ 0.22
SUPT4H1-203ENST00000579289 QRICH2Q9H0J4 1663 aa16.39■□□□□ 0.21
SUPT4H1-203ENST00000579289 SLC16A10Q8TF71 515 aa16.38■□□□□ 0.21
SUPT4H1-203ENST00000579289 CENPJQ9HC77 1338 aaPredicted RBP16.38■□□□□ 0.21
SUPT4H1-203ENST00000579289 ERBB3P21860 1342 aa16.36■□□□□ 0.21
SUPT4H1-203ENST00000579289 USP54Q70EL1 1684 aa16.36■□□□□ 0.21
SUPT4H1-203ENST00000579289 ADCY9O60503 1353 aa16.36■□□□□ 0.21
SUPT4H1-203ENST00000579289 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
SUPT4H1-203ENST00000579289 NSD2O96028 1365 aa16.34■□□□□ 0.21
SUPT4H1-203ENST00000579289 ATP10DQ9P241 1426 aa16.34■□□□□ 0.21
SUPT4H1-203ENST00000579289 USP31Q70CQ4 1352 aa16.33■□□□□ 0.2
SUPT4H1-203ENST00000579289 LY75O60449 1722 aa16.33■□□□□ 0.2
SUPT4H1-203ENST00000579289 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
SUPT4H1-203ENST00000579289 KCNQ4P56696 695 aa16.32■□□□□ 0.2
SUPT4H1-203ENST00000579289 TTC21AQ8NDW8 1320 aa16.31■□□□□ 0.2
SUPT4H1-203ENST00000579289 SLC27A3Q5K4L6 730 aa16.31■□□□□ 0.2
SUPT4H1-203ENST00000579289 ZNF692Q9BU19 519 aaPredicted RBP16.31■□□□□ 0.2
SUPT4H1-203ENST00000579289 CD163L1Q9NR16 1453 aa16.3■□□□□ 0.2
SUPT4H1-203ENST00000579289 SOX12O15370 315 aa16.3■□□□□ 0.2
SUPT4H1-203ENST00000579289 IL2RBP14784 551 aa16.3■□□□□ 0.2
SUPT4H1-203ENST00000579289 MON2Q7Z3U7 1717 aa16.29■□□□□ 0.2
SUPT4H1-203ENST00000579289 HSPA6P17066 643 aa16.28■□□□□ 0.2
SUPT4H1-203ENST00000579289 GRIN3BO60391 1043 aa16.27■□□□□ 0.2
SUPT4H1-203ENST00000579289 POLD1P28340 1107 aa16.27■□□□□ 0.2
SUPT4H1-203ENST00000579289 COL23A1Q86Y22 540 aaPredicted RBP16.27■□□□□ 0.2
SUPT4H1-203ENST00000579289 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
SUPT4H1-203ENST00000579289 LTN1O94822 1766 aa16.26■□□□□ 0.19
SUPT4H1-203ENST00000579289 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
SUPT4H1-203ENST00000579289 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
SUPT4H1-203ENST00000579289 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
SUPT4H1-203ENST00000579289 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
SUPT4H1-203ENST00000579289 DNAJC5GQ8N7S2 189 aa16.24■□□□□ 0.19
SUPT4H1-203ENST00000579289 ANKRD36BQ8N2N9 1353 aa16.24■□□□□ 0.19
SUPT4H1-203ENST00000579289 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
SUPT4H1-203ENST00000579289 DOT1LQ8TEK3 1739 aa16.23■□□□□ 0.19
SUPT4H1-203ENST00000579289 KIF3CO14782 793 aa16.23■□□□□ 0.19
SUPT4H1-203ENST00000579289 ANKRD24Q8TF21 1146 aa16.23■□□□□ 0.19
SUPT4H1-203ENST00000579289 TFCP2L1Q9NZI6 479 aa16.23■□□□□ 0.19
SUPT4H1-203ENST00000579289 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
SUPT4H1-203ENST00000579289 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
SUPT4H1-203ENST00000579289 NME9Q86XW9 330 aa16.22■□□□□ 0.19
SUPT4H1-203ENST00000579289 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms