RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TTC21BQ7Z4L5 1316 aa11.92□□□□□ -0.5
CDK5RAP3-208ENST00000578525 HMOX1P09601 288 aa11.92□□□□□ -0.5
CDK5RAP3-208ENST00000578525 TRIM27P14373 513 aa11.92□□□□□ -0.5
CDK5RAP3-208ENST00000578525 PDZRN3Q9UPQ7 1066 aa11.92□□□□□ -0.5
CDK5RAP3-208ENST00000578525 USP6P35125 1406 aa11.92□□□□□ -0.5
CDK5RAP3-208ENST00000578525 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
CDK5RAP3-208ENST00000578525 RIMS1Q86UR5 1692 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-208ENST00000578525 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-208ENST00000578525 GNAI1P63096 354 aa11.91□□□□□ -0.5
CDK5RAP3-208ENST00000578525 PHACTR3Q96KR7 559 aa11.91□□□□□ -0.5
CDK5RAP3-208ENST00000578525 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
CDK5RAP3-208ENST00000578525 NOB1Q9ULX3 412 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-208ENST00000578525 NBR1Q14596 966 aa11.9□□□□□ -0.5
CDK5RAP3-208ENST00000578525 TBX22Q9Y458 520 aa11.9□□□□□ -0.5
CDK5RAP3-208ENST00000578525 ACEP12821 1306 aa11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 XRN1Q8IZH2 1706 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 HDAC1Q13547 482 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 RRS1Q15050 365 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 ITPRIPQ8IWB1 547 aa11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 DLG5Q8TDM6 1919 aa11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 USP31Q70CQ4 1352 aa11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
CDK5RAP3-208ENST00000578525 SSH2Q76I76 1423 aa11.88□□□□□ -0.51
CDK5RAP3-208ENST00000578525 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
CDK5RAP3-208ENST00000578525 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-208ENST00000578525 PIK3R4Q99570 1358 aa11.88□□□□□ -0.51
CDK5RAP3-208ENST00000578525 RGPD1P0DJD0 1748 aa11.88□□□□□ -0.51
CDK5RAP3-208ENST00000578525 TTC21AQ8NDW8 1320 aa11.87□□□□□ -0.51
CDK5RAP3-208ENST00000578525 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-208ENST00000578525 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
CDK5RAP3-208ENST00000578525 DAXXQ9UER7 740 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-208ENST00000578525 AMOTL2Q9Y2J4 779 aa11.87□□□□□ -0.51
CDK5RAP3-208ENST00000578525 VAMP4O75379 141 aa11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 THEMISQ8N1K5 641 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 ARHGAP45Q92619 1136 aa11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 CHMP4BQ9H444 224 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 USP19O94966 1318 aa11.86□□□□□ -0.51
CDK5RAP3-208ENST00000578525 SMC5Q8IY18 1101 aa11.85□□□□□ -0.51
CDK5RAP3-208ENST00000578525 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
CDK5RAP3-208ENST00000578525 MBIPQ9NS73 344 aa11.85□□□□□ -0.51
CDK5RAP3-208ENST00000578525 ZBTB40Q9NUA8 1239 aa11.85□□□□□ -0.51
CDK5RAP3-208ENST00000578525 ARHGEF10O15013 1369 aa11.84□□□□□ -0.51
CDK5RAP3-208ENST00000578525 USP35Q9P2H5 1018 aa11.84□□□□□ -0.51
CDK5RAP3-208ENST00000578525 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
CDK5RAP3-208ENST00000578525 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
CDK5RAP3-208ENST00000578525 DEKP35659 375 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-208ENST00000578525 TWISTNBQ3B726 338 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-208ENST00000578525 CEP170BQ9Y4F5 1589 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-208ENST00000578525 ABCC4O15439 1325 aa11.83□□□□□ -0.52
CDK5RAP3-208ENST00000578525 SBNO1A3KN83 1393 aa11.82□□□□□ -0.52
CDK5RAP3-208ENST00000578525 KIF24Q5T7B8 1368 aa11.82□□□□□ -0.52
CDK5RAP3-208ENST00000578525 SULT6B1Q6IMI4 303 aa11.82□□□□□ -0.52
CDK5RAP3-208ENST00000578525 AEBP1Q8IUX7 1158 aa11.82□□□□□ -0.52
CDK5RAP3-208ENST00000578525 TSPYL6Q8N831 410 aa11.82□□□□□ -0.52
CDK5RAP3-208ENST00000578525 API5Q9BZZ5 524 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-208ENST00000578525 PIK3C2AO00443 1686 aa11.81□□□□□ -0.52
CDK5RAP3-208ENST00000578525 SEC24BO95487 1268 aa11.81□□□□□ -0.52
CDK5RAP3-208ENST00000578525 C8orf58Q8NAV2 365 aa11.81□□□□□ -0.52
CDK5RAP3-208ENST00000578525 UPF2Q9HAU5 1272 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-208ENST00000578525 FLT4P35916 1363 aa11.8□□□□□ -0.52
CDK5RAP3-208ENST00000578525 RGPD8O14715 1765 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-208ENST00000578525 FAM83GA6ND36 823 aa11.8□□□□□ -0.52
CDK5RAP3-208ENST00000578525 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
CDK5RAP3-208ENST00000578525 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-208ENST00000578525 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
CDK5RAP3-208ENST00000578525 NGDNQ8NEJ9 315 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-208ENST00000578525 MAP3K19Q56UN5 1328 aa11.8□□□□□ -0.52
CDK5RAP3-208ENST00000578525 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
CDK5RAP3-208ENST00000578525 ZNF142P52746 1687 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-208ENST00000578525 ZBTB7BO15156 539 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-208ENST00000578525 NUCB1Q02818 461 aa11.79□□□□□ -0.52
CDK5RAP3-208ENST00000578525 DCTN1Q14203 1278 aa11.79□□□□□ -0.52
CDK5RAP3-208ENST00000578525 BECN1Q14457 450 aa11.79□□□□□ -0.52
CDK5RAP3-208ENST00000578525 HSP90AB2PQ58FF8 381 aa11.79□□□□□ -0.52
CDK5RAP3-208ENST00000578525 TBC1D32Q96NH3 1257 aa11.79□□□□□ -0.52
CDK5RAP3-208ENST00000578525 CRB1P82279 1406 aa11.78□□□□□ -0.52
CDK5RAP3-208ENST00000578525 MARF1Q9Y4F3 1742 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-208ENST00000578525 ELL2O00472 640 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-208ENST00000578525 CHL1O00533 1208 aa11.78□□□□□ -0.52
CDK5RAP3-208ENST00000578525 GCC1Q96CN9 775 aa11.77□□□□□ -0.53
CDK5RAP3-208ENST00000578525 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
CDK5RAP3-208ENST00000578525 KDRP35968 1356 aa11.77□□□□□ -0.53
CDK5RAP3-208ENST00000578525 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
CDK5RAP3-208ENST00000578525 CHD1LQ86WJ1 897 aa11.76□□□□□ -0.53
CDK5RAP3-208ENST00000578525 CHD2O14647 1828 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-208ENST00000578525 SOX12O15370 315 aa11.75□□□□□ -0.53
CDK5RAP3-208ENST00000578525 KCNA6P17658 529 aa11.75□□□□□ -0.53
CDK5RAP3-208ENST00000578525 AMPHP49418 695 aa11.75□□□□□ -0.53
CDK5RAP3-208ENST00000578525 NFKBIBQ15653 356 aa11.74□□□□□ -0.53
CDK5RAP3-208ENST00000578525 INTS3Q68E01 1043 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-208ENST00000578525 MCM10Q7L590 875 aa11.74□□□□□ -0.53
CDK5RAP3-208ENST00000578525 GAS2L2Q8NHY3 880 aa11.74□□□□□ -0.53
CDK5RAP3-208ENST00000578525 RGS12O14924 1447 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms