RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 STIM1Q13586 685 aa12.71□□□□□ -0.37
SEC22B-201ENST00000578049 MAP3K11Q16584 847 aa12.71□□□□□ -0.38
SEC22B-201ENST00000578049 SCAND2PQ9GZW5 306 aaPredicted RBP12.71□□□□□ -0.38
SEC22B-201ENST00000578049 GOLGA6L10A6NI86 522 aa12.7□□□□□ -0.38
SEC22B-201ENST00000578049 CT47A1Q5JQC4 288 aaPredicted RBP12.7□□□□□ -0.38
SEC22B-201ENST00000578049 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
SEC22B-201ENST00000578049 NAIPQ13075 1403 aa12.7□□□□□ -0.38
SEC22B-201ENST00000578049 EPS15P42566 896 aa12.7□□□□□ -0.38
SEC22B-201ENST00000578049 PDE4CQ08493 712 aa12.7□□□□□ -0.38
SEC22B-201ENST00000578049 TRIM22Q8IYM9 498 aa12.7□□□□□ -0.38
SEC22B-201ENST00000578049 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
SEC22B-201ENST00000578049 UBXN4Q92575 508 aa12.7□□□□□ -0.38
SEC22B-201ENST00000578049 NKTRP30414 1462 aaKnown RBP12.69□□□□□ -0.38
SEC22B-201ENST00000578049 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
SEC22B-201ENST00000578049 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
SEC22B-201ENST00000578049 CTNNA3Q9UI47 895 aa12.69□□□□□ -0.38
SEC22B-201ENST00000578049 GRIN2BQ13224 1484 aa12.69□□□□□ -0.38
SEC22B-201ENST00000578049 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
SEC22B-201ENST00000578049 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
SEC22B-201ENST00000578049 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
SEC22B-201ENST00000578049 ME1P48163 572 aa12.69□□□□□ -0.38
SEC22B-201ENST00000578049 SPC24Q8NBT2 197 aa12.69□□□□□ -0.38
SEC22B-201ENST00000578049 TRIM34Q9BYJ4 488 aa12.69□□□□□ -0.38
SEC22B-201ENST00000578049 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEC22B-201ENST00000578049 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
SEC22B-201ENST00000578049 DAPK1P53355 1430 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 CCDC183Q5T5S1 534 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
SEC22B-201ENST00000578049 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC22B-201ENST00000578049 MSH5O43196 834 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 PSME1Q06323 249 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 FBXW7Q969H0 707 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 CCDC43Q96MW1 224 aaKnown RBP12.68□□□□□ -0.38
SEC22B-201ENST00000578049 RAD54L2Q9Y4B4 1467 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 HECW1Q76N89 1606 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
SEC22B-201ENST00000578049 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 ZSCAN25Q6NSZ9 544 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 SLC52A1Q9NWF4 448 aa12.68□□□□□ -0.38
SEC22B-201ENST00000578049 CTAGE5O15320 804 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 UVSSAQ2YD98 709 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 TMCO3Q6UWJ1 677 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 HDGFL1Q5TGJ6 251 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 TSR2Q969E8 191 aaKnown RBP12.67□□□□□ -0.38
SEC22B-201ENST00000578049 PDRG1Q9NUG6 133 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 MCM3P25205 808 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 ODF2Q5BJF6 829 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 KIF18AQ8NI77 898 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 PRIMPOLQ96LW4 560 aa12.67□□□□□ -0.38
SEC22B-201ENST00000578049 PATL2C9JE40 543 aaKnown RBP12.66□□□□□ -0.38
SEC22B-201ENST00000578049 CALCOCO1Q9P1Z2 691 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 CGNQ9P2M7 1197 aaKnown RBP12.66□□□□□ -0.38
SEC22B-201ENST00000578049 ARHGAP5Q13017 1502 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 SUPT6HQ7KZ85 1726 aaKnown RBP12.66□□□□□ -0.38
SEC22B-201ENST00000578049 FAM107BQ9H098 131 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 NCOA1Q15788 1441 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 SFPQP23246 707 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEC22B-201ENST00000578049 CCDC158Q5M9N0 1113 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 WASF1Q92558 559 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 CCDC141Q6ZP82 1450 aa12.66□□□□□ -0.38
SEC22B-201ENST00000578049 RAB11FIP3O75154 756 aa12.65□□□□□ -0.38
SEC22B-201ENST00000578049 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
SEC22B-201ENST00000578049 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
SEC22B-201ENST00000578049 SYNJ1O43426 1573 aa12.65□□□□□ -0.38
SEC22B-201ENST00000578049 PTPN14Q15678 1187 aa12.65□□□□□ -0.38
SEC22B-201ENST00000578049 ANO10Q9NW15 660 aa12.65□□□□□ -0.38
SEC22B-201ENST00000578049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
SEC22B-201ENST00000578049 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
SEC22B-201ENST00000578049 NLRP6P59044 892 aa12.65□□□□□ -0.38
SEC22B-201ENST00000578049 ZRSR2Q15696 482 aaKnown RBP12.65□□□□□ -0.38
SEC22B-201ENST00000578049 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
SEC22B-201ENST00000578049 KLHL40Q2TBA0 621 aa12.65□□□□□ -0.38
SEC22B-201ENST00000578049 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
SEC22B-201ENST00000578049 EVA1CP58658 441 aa12.64□□□□□ -0.39
SEC22B-201ENST00000578049 CCAR1Q8IX12 1150 aaKnown RBP12.64□□□□□ -0.39
SEC22B-201ENST00000578049 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
SEC22B-201ENST00000578049 CLCN1P35523 988 aa12.64□□□□□ -0.39
SEC22B-201ENST00000578049 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
SEC22B-201ENST00000578049 BMP2KLQ5H9B9 411 aa12.64□□□□□ -0.39
SEC22B-201ENST00000578049 CCDC181Q5TID7 509 aa12.64□□□□□ -0.39
SEC22B-201ENST00000578049 SLC12A5Q9H2X9 1139 aa12.64□□□□□ -0.39
SEC22B-201ENST00000578049 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
SEC22B-201ENST00000578049 FOSBP53539 338 aa12.64□□□□□ -0.39
SEC22B-201ENST00000578049 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
SEC22B-201ENST00000578049 DDX19AQ9NUU7 478 aaKnown RBP12.64□□□□□ -0.39
SEC22B-201ENST00000578049 SYCE3A1L190 88 aa12.63□□□□□ -0.39
SEC22B-201ENST00000578049 GSDMDP57764 484 aa12.63□□□□□ -0.39
SEC22B-201ENST00000578049 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
SEC22B-201ENST00000578049 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
SEC22B-201ENST00000578049 CTDP1Q9Y5B0 961 aaPredicted RBP12.63□□□□□ -0.39
SEC22B-201ENST00000578049 HSP90AB2PQ58FF8 381 aa12.63□□□□□ -0.39
SEC22B-201ENST00000578049 TMPOP42166 694 aaKnown RBP12.63□□□□□ -0.39
SEC22B-201ENST00000578049 CDK5RAP3Q96JB5 506 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms