RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PLSCR1O15162 318 aa15.34■□□□□ 0.05
CDK5RAP3-204ENST00000577664 HSPA6P17066 643 aa15.34■□□□□ 0.05
CDK5RAP3-204ENST00000577664 TERF2IPQ9NYB0 399 aa15.34■□□□□ 0.05
CDK5RAP3-204ENST00000577664 ITSN1Q15811 1721 aa15.34■□□□□ 0.05
CDK5RAP3-204ENST00000577664 ZBTB7AO95365 584 aa15.33■□□□□ 0.04
CDK5RAP3-204ENST00000577664 CARD14Q9BXL6 1004 aa15.33■□□□□ 0.04
CDK5RAP3-204ENST00000577664 PANK3Q9H999 370 aa15.33■□□□□ 0.04
CDK5RAP3-204ENST00000577664 PHF8Q9UPP1 1060 aa15.33■□□□□ 0.04
CDK5RAP3-204ENST00000577664 RGPD8O14715 1765 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-204ENST00000577664 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-204ENST00000577664 BARGINQ6ZT62 677 aa15.32■□□□□ 0.04
CDK5RAP3-204ENST00000577664 TMC1Q8TDI8 760 aa15.32■□□□□ 0.04
CDK5RAP3-204ENST00000577664 ACEP12821 1306 aa15.32■□□□□ 0.04
CDK5RAP3-204ENST00000577664 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
CDK5RAP3-204ENST00000577664 SLC34A2O95436 690 aa15.31■□□□□ 0.04
CDK5RAP3-204ENST00000577664 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-204ENST00000577664 GOLGB1Q14789 3259 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-204ENST00000577664 A0A1W2PP64 1363 aa15.3■□□□□ 0.04
CDK5RAP3-204ENST00000577664 PDE3BQ13370 1112 aa15.3■□□□□ 0.04
CDK5RAP3-204ENST00000577664 ALS2Q96Q42 1657 aa15.3■□□□□ 0.04
CDK5RAP3-204ENST00000577664 NPC1L1Q9UHC9 1359 aa15.3■□□□□ 0.04
CDK5RAP3-204ENST00000577664 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-204ENST00000577664 CRYBG1Q9Y4K1 1723 aa15.3■□□□□ 0.04
CDK5RAP3-204ENST00000577664 TRPM3Q9HCF6 1732 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-204ENST00000577664 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
CDK5RAP3-204ENST00000577664 LMOD2Q6P5Q4 547 aa15.29■□□□□ 0.04
CDK5RAP3-204ENST00000577664 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
CDK5RAP3-204ENST00000577664 PMFBP1Q8TBY8 1022 aa15.28■□□□□ 0.04
CDK5RAP3-204ENST00000577664 MTFR1LQ9H019 292 aa15.28■□□□□ 0.04
CDK5RAP3-204ENST00000577664 AKAP12Q02952 1782 aa15.28■□□□□ 0.04
CDK5RAP3-204ENST00000577664 USP6P35125 1406 aa15.27■□□□□ 0.04
CDK5RAP3-204ENST00000577664 EDC4Q6P2E9 1401 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-204ENST00000577664 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-204ENST00000577664 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-204ENST00000577664 AMER1Q5JTC6 1135 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-204ENST00000577664 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
CDK5RAP3-204ENST00000577664 GPR162Q16538 588 aa15.25■□□□□ 0.03
CDK5RAP3-204ENST00000577664 PROM2Q8N271 834 aa15.25■□□□□ 0.03
CDK5RAP3-204ENST00000577664 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
CDK5RAP3-204ENST00000577664 MON2Q7Z3U7 1717 aa15.25■□□□□ 0.03
CDK5RAP3-204ENST00000577664 PEAK1Q9H792 1746 aa15.25■□□□□ 0.03
CDK5RAP3-204ENST00000577664 PRDM11Q9NQV5 511 aa15.24■□□□□ 0.03
CDK5RAP3-204ENST00000577664 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
CDK5RAP3-204ENST00000577664 SBF2Q86WG5 1849 aa15.23■□□□□ 0.03
CDK5RAP3-204ENST00000577664 FYB1O15117 783 aa15.23■□□□□ 0.03
CDK5RAP3-204ENST00000577664 ARXQ96QS3 562 aa15.23■□□□□ 0.03
CDK5RAP3-204ENST00000577664 PARP4Q9UKK3 1724 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-204ENST00000577664 NSD2O96028 1365 aa15.23■□□□□ 0.03
CDK5RAP3-204ENST00000577664 CGNL1Q0VF96 1302 aa15.22■□□□□ 0.03
CDK5RAP3-204ENST00000577664 PRELPP51888 382 aa15.22■□□□□ 0.03
CDK5RAP3-204ENST00000577664 NSD3Q9BZ95 1437 aa15.22■□□□□ 0.03
CDK5RAP3-204ENST00000577664 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
CDK5RAP3-204ENST00000577664 SLC15A2Q16348 729 aa15.21■□□□□ 0.03
CDK5RAP3-204ENST00000577664 BCL11BQ9C0K0 894 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-204ENST00000577664 OVOS2A0A0G2JMS6 1433 aa15.2■□□□□ 0.02
CDK5RAP3-204ENST00000577664 OVOS2A0A0J9YW53 1432 aa15.2■□□□□ 0.02
CDK5RAP3-204ENST00000577664 OVOS2Q6IE36 1432 aa15.2■□□□□ 0.02
CDK5RAP3-204ENST00000577664 DIEXFQ68CQ4 756 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-204ENST00000577664 ATP10DQ9P241 1426 aa15.19■□□□□ 0.02
CDK5RAP3-204ENST00000577664 THRAP3Q9Y2W1 955 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-204ENST00000577664 COL13A1Q5TAT6 717 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-204ENST00000577664 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
CDK5RAP3-204ENST00000577664 DNAJC5GQ8N7S2 189 aa15.18■□□□□ 0.02
CDK5RAP3-204ENST00000577664 STRN4Q9NRL3 753 aa15.18■□□□□ 0.02
CDK5RAP3-204ENST00000577664 STK32BQ9NY57 414 aa15.18■□□□□ 0.02
CDK5RAP3-204ENST00000577664 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
CDK5RAP3-204ENST00000577664 KIAA0232Q92628 1395 aa15.18■□□□□ 0.02
CDK5RAP3-204ENST00000577664 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
CDK5RAP3-204ENST00000577664 BCL9O00512 1426 aa15.17■□□□□ 0.02
CDK5RAP3-204ENST00000577664 AATKQ6ZMQ8 1374 aa15.16■□□□□ 0.02
CDK5RAP3-204ENST00000577664 RALBP1Q15311 655 aa15.16■□□□□ 0.02
CDK5RAP3-204ENST00000577664 PRKRIP1Q9H875 184 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-204ENST00000577664 USP35Q9P2H5 1018 aa15.16■□□□□ 0.02
CDK5RAP3-204ENST00000577664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDK5RAP3-204ENST00000577664 ABTB2Q8N961 1025 aa15.15■□□□□ 0.02
CDK5RAP3-204ENST00000577664 GPBP1L1Q9HC44 474 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-204ENST00000577664 CHRNA2Q15822 529 aa15.14■□□□□ 0.01
CDK5RAP3-204ENST00000577664 NLRP13Q86W25 1043 aa15.14■□□□□ 0.01
CDK5RAP3-204ENST00000577664 NME9Q86XW9 330 aa15.14■□□□□ 0.01
CDK5RAP3-204ENST00000577664 ADCY9O60503 1353 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 GRIN3BO60391 1043 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 CAPN15O75808 1086 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 APLP1P51693 650 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 TXNRD1Q16881 649 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 COL24A1Q17RW2 1714 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 PTF1AQ7RTS3 328 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 PHRF1Q9P1Y6 1649 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 USP19O94966 1318 aa15.13■□□□□ 0.01
CDK5RAP3-204ENST00000577664 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
CDK5RAP3-204ENST00000577664 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-204ENST00000577664 NLRP6P59044 892 aa15.12■□□□□ 0.01
CDK5RAP3-204ENST00000577664 LARP1Q6PKG0 1096 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-204ENST00000577664 COG3Q96JB2 828 aa15.12■□□□□ 0.01
CDK5RAP3-204ENST00000577664 LMO7Q8WWI1 1683 aa15.12■□□□□ 0.01
CDK5RAP3-204ENST00000577664 ANKRD26Q9UPS8 1709 aa15.12■□□□□ 0.01
CDK5RAP3-204ENST00000577664 KIF20BQ96Q89 1820 aa15.11■□□□□ 0.01
CDK5RAP3-204ENST00000577664 ANP32CO43423 234 aa15.11■□□□□ 0.01
CDK5RAP3-204ENST00000577664 CC2D1BQ5T0F9 858 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-204ENST00000577664 EVA1CP58658 441 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms