RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
RARA-208ENST00000577646 VPS72Q15906 364 aa16.85■□□□□ 0.29
RARA-208ENST00000577646 IP6K1Q92551 441 aa16.85■□□□□ 0.29
RARA-208ENST00000577646 RTL1A6NKG5 1358 aa16.85■□□□□ 0.29
RARA-208ENST00000577646 EVA1CP58658 441 aa16.84■□□□□ 0.29
RARA-208ENST00000577646 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
RARA-208ENST00000577646 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
RARA-208ENST00000577646 PLCH1Q4KWH8 1693 aa16.83■□□□□ 0.28
RARA-208ENST00000577646 LMO7Q8WWI1 1683 aa16.83■□□□□ 0.28
RARA-208ENST00000577646 MAP3K19Q56UN5 1328 aa16.82■□□□□ 0.28
RARA-208ENST00000577646 SOX12O15370 315 aa16.82■□□□□ 0.28
RARA-208ENST00000577646 AMPHP49418 695 aa16.82■□□□□ 0.28
RARA-208ENST00000577646 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
RARA-208ENST00000577646 COL18A1P39060 1754 aa16.81■□□□□ 0.28
RARA-208ENST00000577646 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
RARA-208ENST00000577646 THRAP3Q9Y2W1 955 aaKnown RBP16.8■□□□□ 0.28
RARA-208ENST00000577646 FLT4P35916 1363 aa16.79■□□□□ 0.28
RARA-208ENST00000577646 WDR17Q8IZU2 1322 aa16.79■□□□□ 0.28
RARA-208ENST00000577646 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
RARA-208ENST00000577646 HOXC9P31274 260 aa16.79■□□□□ 0.28
RARA-208ENST00000577646 POLKQ9UBT6 870 aa16.79■□□□□ 0.28
RARA-208ENST00000577646 AXIN2Q9Y2T1 843 aa16.79■□□□□ 0.28
RARA-208ENST00000577646 COL5A2P05997 1499 aaPredicted RBP16.79■□□□□ 0.28
RARA-208ENST00000577646 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
RARA-208ENST00000577646 INSRP06213 1382 aa16.78■□□□□ 0.28
RARA-208ENST00000577646 SPATA31A5Q5VU36 1347 aa16.78■□□□□ 0.28
RARA-208ENST00000577646 SPATA31A7Q8IWB4 1347 aa16.78■□□□□ 0.28
RARA-208ENST00000577646 ONECUT3O60422 494 aaPredicted RBP16.78■□□□□ 0.28
RARA-208ENST00000577646 LTN1O94822 1766 aa16.78■□□□□ 0.28
RARA-208ENST00000577646 RRS1Q15050 365 aaKnown RBP16.77■□□□□ 0.28
RARA-208ENST00000577646 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
RARA-208ENST00000577646 CRB1P82279 1406 aa16.77■□□□□ 0.27
RARA-208ENST00000577646 SMG6Q86US8 1419 aaKnown RBP16.77■□□□□ 0.27
RARA-208ENST00000577646 ERBB3P21860 1342 aa16.76■□□□□ 0.27
RARA-208ENST00000577646 SPATA31A1Q5TZJ5 1347 aa16.76■□□□□ 0.27
RARA-208ENST00000577646 A0A0G2JS52 829 aa16.76■□□□□ 0.27
RARA-208ENST00000577646 MYT1Q01538 1121 aa16.76■□□□□ 0.27
RARA-208ENST00000577646 RALBP1Q15311 655 aa16.76■□□□□ 0.27
RARA-208ENST00000577646 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
RARA-208ENST00000577646 CARD10Q9BWT7 1032 aa16.76■□□□□ 0.27
RARA-208ENST00000577646 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
RARA-208ENST00000577646 CSB-PGBD3P0DP91 1061 aa16.75■□□□□ 0.27
RARA-208ENST00000577646 BARGINQ6ZT62 677 aa16.75■□□□□ 0.27
RARA-208ENST00000577646 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
RARA-208ENST00000577646 CDCA7Q9BWT1 371 aaPredicted RBP16.75■□□□□ 0.27
RARA-208ENST00000577646 GLI3P10071 1580 aa16.74■□□□□ 0.27
RARA-208ENST00000577646 FBLN1P23142 703 aa16.74■□□□□ 0.27
RARA-208ENST00000577646 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
RARA-208ENST00000577646 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
RARA-208ENST00000577646 TOM1L2Q6ZVM7 507 aa16.74■□□□□ 0.27
RARA-208ENST00000577646 TCP11L2Q8N4U5 519 aa16.74■□□□□ 0.27
RARA-208ENST00000577646 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
RARA-208ENST00000577646 MAP2P11137 1827 aaKnown RBP16.74■□□□□ 0.27
RARA-208ENST00000577646 EP400Q96L91 3159 aa16.73■□□□□ 0.27
RARA-208ENST00000577646 FAM208AQ9UK61 1670 aaKnown RBP16.72■□□□□ 0.27
RARA-208ENST00000577646 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
RARA-208ENST00000577646 FAM98CQ17RN3 349 aaKnown RBP16.72■□□□□ 0.27
RARA-208ENST00000577646 HSP90AB2PQ58FF8 381 aa16.72■□□□□ 0.27
RARA-208ENST00000577646 CCDC125Q86Z20 511 aa16.72■□□□□ 0.27
RARA-208ENST00000577646 PARD3Q8TEW0 1356 aa16.72■□□□□ 0.27
RARA-208ENST00000577646 MTHFSP49914 203 aa16.71■□□□□ 0.27
RARA-208ENST00000577646 KRT27Q7Z3Y8 459 aa16.7■□□□□ 0.26
RARA-208ENST00000577646 CFAP53Q96M91 514 aa16.7■□□□□ 0.26
RARA-208ENST00000577646 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
RARA-208ENST00000577646 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
RARA-208ENST00000577646 PEAK1Q9H792 1746 aa16.68■□□□□ 0.26
RARA-208ENST00000577646 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
RARA-208ENST00000577646 PPP2R1AP30153 589 aa16.68■□□□□ 0.26
RARA-208ENST00000577646 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
RARA-208ENST00000577646 LTV1Q96GA3 475 aaPredicted RBP16.67■□□□□ 0.26
RARA-208ENST00000577646 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
RARA-208ENST00000577646 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
RARA-208ENST00000577646 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
RARA-208ENST00000577646 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
RARA-208ENST00000577646 IL2RBP14784 551 aa16.64■□□□□ 0.25
RARA-208ENST00000577646 NBPF6Q5VWK0 638 aa16.64■□□□□ 0.25
RARA-208ENST00000577646 NBPF4Q96M43 638 aa16.64■□□□□ 0.25
RARA-208ENST00000577646 MYBBP1AQ9BQG0 1328 aaKnown RBP16.64■□□□□ 0.25
RARA-208ENST00000577646 NCAPD2Q15021 1401 aa16.63■□□□□ 0.25
RARA-208ENST00000577646 IL13P35225 146 aa16.63■□□□□ 0.25
RARA-208ENST00000577646 EYA1Q99502 592 aa16.63■□□□□ 0.25
RARA-208ENST00000577646 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
RARA-208ENST00000577646 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
RARA-208ENST00000577646 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
RARA-208ENST00000577646 BRWD3Q6RI45 1802 aa16.62■□□□□ 0.25
RARA-208ENST00000577646 EXOC5O00471 708 aa16.62■□□□□ 0.25
RARA-208ENST00000577646 CNGB1Q14028 1251 aaPredicted RBP16.62■□□□□ 0.25
RARA-208ENST00000577646 RAPGEF4Q8WZA2 1011 aa16.62■□□□□ 0.25
RARA-208ENST00000577646 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
RARA-208ENST00000577646 ANP32CO43423 234 aa16.61■□□□□ 0.25
RARA-208ENST00000577646 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
RARA-208ENST00000577646 DDB1Q16531 1140 aa16.61■□□□□ 0.25
RARA-208ENST00000577646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.61■□□□□ 0.25
RARA-208ENST00000577646 PARP4Q9UKK3 1724 aaKnown RBP16.6■□□□□ 0.25
RARA-208ENST00000577646 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
RARA-208ENST00000577646 KDRP35968 1356 aa16.58■□□□□ 0.24
RARA-208ENST00000577646 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
RARA-208ENST00000577646 ZCRB1Q8TBF4 217 aaKnown RBP16.57■□□□□ 0.24
RARA-208ENST00000577646 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
RARA-208ENST00000577646 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms