RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	FAM182B	Q5T319	152 aa		13.88	□□□□□ -0.19
TOM1L1-223	ENST00000576932	RREB1	Q92766	1687 aa		13.88	□□□□□ -0.19
TOM1L1-223	ENST00000576932	ALS2	Q96Q42	1657 aa		13.88	□□□□□ -0.19
TOM1L1-223	ENST00000576932	PSEN1	P49768	467 aa		13.87	□□□□□ -0.19
TOM1L1-223	ENST00000576932	PHF12	Q96QT6	1004 aa		13.87	□□□□□ -0.19
TOM1L1-223	ENST00000576932	TRIM37	O94972	964 aa		13.86	□□□□□ -0.19
TOM1L1-223	ENST00000576932	APBA3	O96018	575 aa		13.86	□□□□□ -0.19
TOM1L1-223	ENST00000576932	NBPF8	Q3BBV2	869 aa		13.86	□□□□□ -0.19
TOM1L1-223	ENST00000576932	NBPF14	Q5TI25	921 aa		13.86	□□□□□ -0.19
TOM1L1-223	ENST00000576932	SPATA31A1	Q5TZJ5	1347 aa		13.86	□□□□□ -0.19
TOM1L1-223	ENST00000576932	GPRASP1	Q5JY77	1395 aa		13.85	□□□□□ -0.19
TOM1L1-223	ENST00000576932	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.85	□□□□□ -0.19
TOM1L1-223	ENST00000576932	IFNL1	Q8IU54	200 aa		13.85	□□□□□ -0.19
TOM1L1-223	ENST00000576932	CFAP44	Q96MT7	982 aa		13.85	□□□□□ -0.19
TOM1L1-223	ENST00000576932	SPON1	Q9HCB6	807 aa		13.85	□□□□□ -0.19
TOM1L1-223	ENST00000576932	EIF3A	Q14152	1382 aa	Known RBP	13.84	□□□□□ -0.19
TOM1L1-223	ENST00000576932	DHX57	Q6P158	1386 aa	Known RBP	13.84	□□□□□ -0.19
TOM1L1-223	ENST00000576932	NUP188	Q5SRE5	1749 aa		13.84	□□□□□ -0.19
TOM1L1-223	ENST00000576932	CRYBG1	Q9Y4K1	1723 aa		13.84	□□□□□ -0.19
TOM1L1-223	ENST00000576932	C14orf93	Q9H972	538 aa	Known RBP	13.84	□□□□□ -0.19
TOM1L1-223	ENST00000576932	DLC1	Q96QB1	1528 aa		13.84	□□□□□ -0.19
TOM1L1-223	ENST00000576932	RGL3	Q3MIN7	710 aa		13.83	□□□□□ -0.2
TOM1L1-223	ENST00000576932	PMFBP1	Q8TBY8	1022 aa		13.83	□□□□□ -0.2
TOM1L1-223	ENST00000576932	PRDM11	Q9NQV5	511 aa		13.83	□□□□□ -0.2
TOM1L1-223	ENST00000576932	ACIN1	Q9UKV3	1341 aa	Known RBP	13.83	□□□□□ -0.2
TOM1L1-223	ENST00000576932	KCNQ2	O43526	872 aa		13.82	□□□□□ -0.2
TOM1L1-223	ENST00000576932	GOLGA2	Q08379	1002 aa		13.82	□□□□□ -0.2
TOM1L1-223	ENST00000576932	POTEH	Q6S545	545 aa		13.82	□□□□□ -0.2
TOM1L1-223	ENST00000576932	PRAM1	Q96QH2	718 aa		13.82	□□□□□ -0.2
TOM1L1-223	ENST00000576932	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.82	□□□□□ -0.2
TOM1L1-223	ENST00000576932	C11orf95	C9JLR9	678 aa	Predicted RBP	13.81	□□□□□ -0.2
TOM1L1-223	ENST00000576932	BARGIN	Q6ZT62	677 aa		13.81	□□□□□ -0.2
TOM1L1-223	ENST00000576932	PDE3B	Q13370	1112 aa		13.79	□□□□□ -0.2
TOM1L1-223	ENST00000576932	TULP4	Q9NRJ4	1543 aa		13.79	□□□□□ -0.2
TOM1L1-223	ENST00000576932	KIAA0232	Q92628	1395 aa		13.78	□□□□□ -0.2
TOM1L1-223	ENST00000576932	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.77	□□□□□ -0.21
TOM1L1-223	ENST00000576932	UTRN	P46939	3433 aa		13.77	□□□□□ -0.21
TOM1L1-223	ENST00000576932	RGPD4	Q7Z3J3	1758 aa		13.77	□□□□□ -0.21
TOM1L1-223	ENST00000576932	POGK	Q9P215	609 aa		13.77	□□□□□ -0.21
TOM1L1-223	ENST00000576932	ATP7B	P35670	1465 aa		13.76	□□□□□ -0.21
TOM1L1-223	ENST00000576932	PRR36	Q9H6K5	1346 aa		13.76	□□□□□ -0.21
TOM1L1-223	ENST00000576932	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
TOM1L1-223	ENST00000576932	CFAP70	Q5T0N1	1121 aa		13.76	□□□□□ -0.21
TOM1L1-223	ENST00000576932	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.75	□□□□□ -0.21
TOM1L1-223	ENST00000576932	SSH2	Q76I76	1423 aa		13.75	□□□□□ -0.21
TOM1L1-223	ENST00000576932	STRN4	Q9NRL3	753 aa		13.75	□□□□□ -0.21
TOM1L1-223	ENST00000576932	THRAP3	Q9Y2W1	955 aa	Known RBP	13.75	□□□□□ -0.21
TOM1L1-223	ENST00000576932	TCP11L2	Q8N4U5	519 aa		13.74	□□□□□ -0.21
TOM1L1-223	ENST00000576932	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.74	□□□□□ -0.21
TOM1L1-223	ENST00000576932	NGDN	Q8NEJ9	315 aa	Known RBP	13.74	□□□□□ -0.21
TOM1L1-223	ENST00000576932	MS4A3	Q96HJ5	214 aa		13.74	□□□□□ -0.21
TOM1L1-223	ENST00000576932	WASL	O00401	505 aa	Predicted RBP	13.73	□□□□□ -0.21
TOM1L1-223	ENST00000576932	PLSCR1	O15162	318 aa		13.73	□□□□□ -0.21
TOM1L1-223	ENST00000576932	ADGRB1	O14514	1584 aa		13.73	□□□□□ -0.21
TOM1L1-223	ENST00000576932	CAMTA1	Q9Y6Y1	1673 aa		13.72	□□□□□ -0.21
TOM1L1-223	ENST00000576932	EVA1C	P58658	441 aa		13.72	□□□□□ -0.21
TOM1L1-223	ENST00000576932	CHRNA2	Q15822	529 aa		13.72	□□□□□ -0.21
TOM1L1-223	ENST00000576932	MPHOSPH9	Q99550	1183 aa		13.72	□□□□□ -0.21
TOM1L1-223	ENST00000576932	CASZ1	Q86V15	1759 aa		13.72	□□□□□ -0.21
TOM1L1-223	ENST00000576932	PARP4	Q9UKK3	1724 aa	Known RBP	13.72	□□□□□ -0.21
TOM1L1-223	ENST00000576932	CPD	O75976	1380 aa		13.71	□□□□□ -0.21
TOM1L1-223	ENST00000576932	ITSN1	Q15811	1721 aa		13.71	□□□□□ -0.21
TOM1L1-223	ENST00000576932	TIE1	P35590	1138 aa		13.71	□□□□□ -0.21
TOM1L1-223	ENST00000576932	IFFO2	Q5TF58	517 aa		13.71	□□□□□ -0.21
TOM1L1-223	ENST00000576932	TMEM106C	Q9BVX2	250 aa		13.71	□□□□□ -0.21
TOM1L1-223	ENST00000576932	USP35	Q9P2H5	1018 aa		13.71	□□□□□ -0.21
TOM1L1-223	ENST00000576932	NRK	Q7Z2Y5	1582 aa		13.71	□□□□□ -0.22
TOM1L1-223	ENST00000576932	LMO7	Q8WWI1	1683 aa		13.7	□□□□□ -0.22
TOM1L1-223	ENST00000576932	OVOS2	A0A0G2JMS6	1433 aa		13.7	□□□□□ -0.22
TOM1L1-223	ENST00000576932	OVOS2	A0A0J9YW53	1432 aa		13.7	□□□□□ -0.22
TOM1L1-223	ENST00000576932	OVOS2	Q6IE36	1432 aa		13.7	□□□□□ -0.22
TOM1L1-223	ENST00000576932	SENP3-EIF4A1	A0A087X0R7	540 aa		13.69	□□□□□ -0.22
TOM1L1-223	ENST00000576932	SOX12	O15370	315 aa		13.69	□□□□□ -0.22
TOM1L1-223	ENST00000576932	C1QTNF8	P60827	252 aa		13.69	□□□□□ -0.22
TOM1L1-223	ENST00000576932	ZC3H6	P61129	1189 aa	Known RBP	13.69	□□□□□ -0.22
TOM1L1-223	ENST00000576932	LARP1	Q6PKG0	1096 aa	Known RBP	13.69	□□□□□ -0.22
TOM1L1-223	ENST00000576932	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.69	□□□□□ -0.22
TOM1L1-223	ENST00000576932	CABP2	Q9NPB3	220 aa		13.69	□□□□□ -0.22
TOM1L1-223	ENST00000576932	PEAK1	Q9H792	1746 aa		13.69	□□□□□ -0.22
TOM1L1-223	ENST00000576932	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.68	□□□□□ -0.22
TOM1L1-223	ENST00000576932	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.68	□□□□□ -0.22
TOM1L1-223	ENST00000576932	CHD4	Q14839	1912 aa		13.68	□□□□□ -0.22
TOM1L1-223	ENST00000576932	MKRN3	Q13064	507 aa	Known RBP	13.67	□□□□□ -0.22
TOM1L1-223	ENST00000576932	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.67	□□□□□ -0.22
TOM1L1-223	ENST00000576932	TRAK1	Q9UPV9	953 aa		13.67	□□□□□ -0.22
TOM1L1-223	ENST00000576932	POLR3A	O14802	1390 aa	Predicted RBP	13.67	□□□□□ -0.22
TOM1L1-223	ENST00000576932	BCL9	O00512	1426 aa		13.66	□□□□□ -0.22
TOM1L1-223	ENST00000576932	PTGER2	P43116	358 aa		13.66	□□□□□ -0.22
TOM1L1-223	ENST00000576932	MYOM1	P52179	1685 aa		13.66	□□□□□ -0.22
TOM1L1-223	ENST00000576932	USP19	O94966	1318 aa		13.65	□□□□□ -0.22
TOM1L1-223	ENST00000576932	CRB1	P82279	1406 aa		13.65	□□□□□ -0.22
TOM1L1-223	ENST00000576932	SBF2	Q86WG5	1849 aa		13.65	□□□□□ -0.22
TOM1L1-223	ENST00000576932	NLRP6	P59044	892 aa		13.65	□□□□□ -0.22
TOM1L1-223	ENST00000576932	NUDT16	Q96DE0	195 aa	Known RBP	13.65	□□□□□ -0.22
TOM1L1-223	ENST00000576932	COL5A2	P05997	1499 aa	Predicted RBP	13.65	□□□□□ -0.22
TOM1L1-223	ENST00000576932	STAC3	Q96MF2	364 aa		13.64	□□□□□ -0.23
TOM1L1-223	ENST00000576932	SYT17	Q9BSW7	474 aa		13.64	□□□□□ -0.23
TOM1L1-223	ENST00000576932	NKX1-1	Q15270	411 aa	Predicted RBP	13.63	□□□□□ -0.23
TOM1L1-223	ENST00000576932	VSIG10	Q8N0Z9	540 aa		13.63	□□□□□ -0.23
TOM1L1-223	ENST00000576932	AATK	Q6ZMQ8	1374 aa		13.62	□□□□□ -0.23

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