RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 USP31Q70CQ4 1352 aa18.43■□□□□ 0.54
RPAIN-216ENST00000575599 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
RPAIN-216ENST00000575599 NFAT5O94916 1531 aa18.43■□□□□ 0.54
RPAIN-216ENST00000575599 EVA1CP58658 441 aa18.42■□□□□ 0.54
RPAIN-216ENST00000575599 A0A0G2JS52 829 aa18.42■□□□□ 0.54
RPAIN-216ENST00000575599 MYT1Q01538 1121 aa18.42■□□□□ 0.54
RPAIN-216ENST00000575599 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
RPAIN-216ENST00000575599 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
RPAIN-216ENST00000575599 OVOS2A0A0J9YW53 1432 aa18.4■□□□□ 0.54
RPAIN-216ENST00000575599 OVOS2Q6IE36 1432 aa18.4■□□□□ 0.54
RPAIN-216ENST00000575599 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
RPAIN-216ENST00000575599 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
RPAIN-216ENST00000575599 COL5A2P05997 1499 aaPredicted RBP18.4■□□□□ 0.54
RPAIN-216ENST00000575599 ARHGEF25Q86VW2 580 aa18.39■□□□□ 0.53
RPAIN-216ENST00000575599 SEPT12Q8IYM1 358 aa18.39■□□□□ 0.53
RPAIN-216ENST00000575599 USP35Q9P2H5 1018 aa18.39■□□□□ 0.53
RPAIN-216ENST00000575599 COL18A1P39060 1754 aa18.38■□□□□ 0.53
RPAIN-216ENST00000575599 BRWD3Q6RI45 1802 aa18.38■□□□□ 0.53
RPAIN-216ENST00000575599 LARP1Q6PKG0 1096 aaKnown RBP18.38■□□□□ 0.53
RPAIN-216ENST00000575599 SPATA31A1Q5TZJ5 1347 aa18.37■□□□□ 0.53
RPAIN-216ENST00000575599 LTN1O94822 1766 aa18.37■□□□□ 0.53
RPAIN-216ENST00000575599 COG3Q96JB2 828 aa18.37■□□□□ 0.53
RPAIN-216ENST00000575599 NSD3Q9BZ95 1437 aa18.37■□□□□ 0.53
RPAIN-216ENST00000575599 KIF20BQ96Q89 1820 aa18.37■□□□□ 0.53
RPAIN-216ENST00000575599 RGPD5Q99666 1765 aa18.36■□□□□ 0.53
RPAIN-216ENST00000575599 UPF1Q92900 1129 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPAIN-216ENST00000575599 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
RPAIN-216ENST00000575599 AXIN2Q9Y2T1 843 aa18.35■□□□□ 0.53
RPAIN-216ENST00000575599 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-216ENST00000575599 NPM3O75607 178 aaKnown RBP18.34■□□□□ 0.53
RPAIN-216ENST00000575599 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
RPAIN-216ENST00000575599 THSD7AQ9UPZ6 1657 aa18.34■□□□□ 0.53
RPAIN-216ENST00000575599 ABCC6O95255 1503 aa18.33■□□□□ 0.53
RPAIN-216ENST00000575599 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.53
RPAIN-216ENST00000575599 FYB1O15117 783 aa18.33■□□□□ 0.53
RPAIN-216ENST00000575599 CRB1P82279 1406 aa18.33■□□□□ 0.52
RPAIN-216ENST00000575599 CSB-PGBD3P0DP91 1061 aa18.32■□□□□ 0.52
RPAIN-216ENST00000575599 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
RPAIN-216ENST00000575599 KRT27Q7Z3Y8 459 aa18.31■□□□□ 0.52
RPAIN-216ENST00000575599 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
RPAIN-216ENST00000575599 WDR17Q8IZU2 1322 aa18.3■□□□□ 0.52
RPAIN-216ENST00000575599 FBLN1P23142 703 aa18.3■□□□□ 0.52
RPAIN-216ENST00000575599 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
RPAIN-216ENST00000575599 KIF7Q2M1P5 1343 aa18.28■□□□□ 0.52
RPAIN-216ENST00000575599 PANK3Q9H999 370 aa18.28■□□□□ 0.52
RPAIN-216ENST00000575599 THRAP3Q9Y2W1 955 aaKnown RBP18.28■□□□□ 0.52
RPAIN-216ENST00000575599 EP400Q96L91 3159 aa18.28■□□□□ 0.52
RPAIN-216ENST00000575599 CGNL1Q0VF96 1302 aa18.27■□□□□ 0.52
RPAIN-216ENST00000575599 MAP3K19Q56UN5 1328 aa18.27■□□□□ 0.52
RPAIN-216ENST00000575599 AMPHP49418 695 aa18.26■□□□□ 0.51
RPAIN-216ENST00000575599 RRS1Q15050 365 aaKnown RBP18.26■□□□□ 0.51
RPAIN-216ENST00000575599 ERBB3P21860 1342 aa18.26■□□□□ 0.51
RPAIN-216ENST00000575599 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
RPAIN-216ENST00000575599 BLMP54132 1417 aaPredicted RBP18.25■□□□□ 0.51
RPAIN-216ENST00000575599 FAM182BQ5T319 152 aa18.25■□□□□ 0.51
RPAIN-216ENST00000575599 ANKRD24Q8TF21 1146 aa18.25■□□□□ 0.51
RPAIN-216ENST00000575599 IP6K1Q92551 441 aa18.24■□□□□ 0.51
RPAIN-216ENST00000575599 LTV1Q96GA3 475 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-216ENST00000575599 PARP4Q9UKK3 1724 aaKnown RBP18.24■□□□□ 0.51
RPAIN-216ENST00000575599 HOXC9P31274 260 aa18.23■□□□□ 0.51
RPAIN-216ENST00000575599 CARD10Q9BWT7 1032 aa18.23■□□□□ 0.51
RPAIN-216ENST00000575599 NLRP2Q9NX02 1062 aa18.23■□□□□ 0.51
RPAIN-216ENST00000575599 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
RPAIN-216ENST00000575599 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
RPAIN-216ENST00000575599 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
RPAIN-216ENST00000575599 RTL1A6NKG5 1358 aa18.22■□□□□ 0.51
RPAIN-216ENST00000575599 CCDC7Q96M83 1385 aa18.21■□□□□ 0.51
RPAIN-216ENST00000575599 PEAK1Q9H792 1746 aa18.2■□□□□ 0.5
RPAIN-216ENST00000575599 FAM208AQ9UK61 1670 aaKnown RBP18.2■□□□□ 0.5
RPAIN-216ENST00000575599 WASHC2AQ641Q2 1341 aa18.18■□□□□ 0.5
RPAIN-216ENST00000575599 ABCB7O75027 752 aa18.18■□□□□ 0.5
RPAIN-216ENST00000575599 TNNT2P45379 298 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-216ENST00000575599 DDB1Q16531 1140 aa18.18■□□□□ 0.5
RPAIN-216ENST00000575599 CCDC125Q86Z20 511 aa18.18■□□□□ 0.5
RPAIN-216ENST00000575599 CDCA7Q9BWT1 371 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-216ENST00000575599 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
RPAIN-216ENST00000575599 DISP2A7MBM2 1401 aa18.18■□□□□ 0.5
RPAIN-216ENST00000575599 FLT4P35916 1363 aa18.18■□□□□ 0.5
RPAIN-216ENST00000575599 SF3B2Q13435 895 aaKnown RBP18.17■□□□□ 0.5
RPAIN-216ENST00000575599 EMILIN1Q9Y6C2 1016 aa18.17■□□□□ 0.5
RPAIN-216ENST00000575599 SMG6Q86US8 1419 aaKnown RBP18.17■□□□□ 0.5
RPAIN-216ENST00000575599 NSD2O96028 1365 aa18.17■□□□□ 0.5
RPAIN-216ENST00000575599 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-216ENST00000575599 ZNF219Q9P2Y4 722 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-216ENST00000575599 RGPD2P0DJD1 1756 aa18.16■□□□□ 0.5
RPAIN-216ENST00000575599 HSP90AB2PQ58FF8 381 aa18.16■□□□□ 0.5
RPAIN-216ENST00000575599 FAM196AQ6ZSG2 479 aa18.16■□□□□ 0.5
RPAIN-216ENST00000575599 RGPD1P0DJD0 1748 aa18.16■□□□□ 0.5
RPAIN-216ENST00000575599 KIF24Q5T7B8 1368 aa18.15■□□□□ 0.5
RPAIN-216ENST00000575599 MAP2P11137 1827 aaKnown RBP18.15■□□□□ 0.5
RPAIN-216ENST00000575599 INSRP06213 1382 aa18.14■□□□□ 0.49
RPAIN-216ENST00000575599 IL2RBP14784 551 aa18.14■□□□□ 0.49
RPAIN-216ENST00000575599 TNS2Q63HR2 1409 aa18.14■□□□□ 0.49
RPAIN-216ENST00000575599 OVOS2A0A0G2JMS6 1433 aa18.13■□□□□ 0.49
RPAIN-216ENST00000575599 TRIM37O94972 964 aa18.13■□□□□ 0.49
RPAIN-216ENST00000575599 DEFB132Q7Z7B7 95 aa18.13■□□□□ 0.49
RPAIN-216ENST00000575599 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
RPAIN-216ENST00000575599 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
RPAIN-216ENST00000575599 EXOC5O00471 708 aa18.12■□□□□ 0.49
RPAIN-216ENST00000575599 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms