RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 TXNDC2Q86VQ3 553 aa11.32□□□□□ -0.6
NCBP3-204ENST00000574911 PTCH1Q13635 1447 aa11.32□□□□□ -0.6
NCBP3-204ENST00000574911 ARHGAP45Q92619 1136 aa11.31□□□□□ -0.6
NCBP3-204ENST00000574911 ANTXR1Q9H6X2 564 aa11.31□□□□□ -0.6
NCBP3-204ENST00000574911 AKAP12Q02952 1782 aa11.31□□□□□ -0.6
NCBP3-204ENST00000574911 C3P01024 1663 aa11.31□□□□□ -0.6
NCBP3-204ENST00000574911 GNAI1P63096 354 aa11.31□□□□□ -0.6
NCBP3-204ENST00000574911 NUCB1Q02818 461 aa11.31□□□□□ -0.6
NCBP3-204ENST00000574911 TBC1D2Q9BYX2 928 aa11.31□□□□□ -0.6
NCBP3-204ENST00000574911 CCDC61Q9Y6R9 512 aa11.31□□□□□ -0.6
NCBP3-204ENST00000574911 THUMPD2Q9BTF0 503 aaKnown RBP11.3□□□□□ -0.6
NCBP3-204ENST00000574911 COG3Q96JB2 828 aa11.3□□□□□ -0.6
NCBP3-204ENST00000574911 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
NCBP3-204ENST00000574911 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
NCBP3-204ENST00000574911 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
NCBP3-204ENST00000574911 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
NCBP3-204ENST00000574911 C22orf23Q9BZE7 217 aa11.29□□□□□ -0.6
NCBP3-204ENST00000574911 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
NCBP3-204ENST00000574911 ITSN1Q15811 1721 aa11.29□□□□□ -0.6
NCBP3-204ENST00000574911 LMOD3Q0VAK6 560 aa11.29□□□□□ -0.6
NCBP3-204ENST00000574911 ZNF692Q9BU19 519 aaPredicted RBP11.29□□□□□ -0.6
NCBP3-204ENST00000574911 CHMP4BQ9H444 224 aaKnown RBP11.28□□□□□ -0.6
NCBP3-204ENST00000574911 NRKQ7Z2Y5 1582 aa11.28□□□□□ -0.6
NCBP3-204ENST00000574911 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
NCBP3-204ENST00000574911 RRS1Q15050 365 aaKnown RBP11.28□□□□□ -0.6
NCBP3-204ENST00000574911 CHD1LQ86WJ1 897 aa11.28□□□□□ -0.6
NCBP3-204ENST00000574911 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
NCBP3-204ENST00000574911 SLKQ9H2G2 1235 aaPredicted RBP11.28□□□□□ -0.6
NCBP3-204ENST00000574911 TNRQ92752 1358 aa11.28□□□□□ -0.6
NCBP3-204ENST00000574911 ABCC4O15439 1325 aa11.27□□□□□ -0.6
NCBP3-204ENST00000574911 MFAP1P55081 439 aaKnown RBP11.27□□□□□ -0.61
NCBP3-204ENST00000574911 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.61
NCBP3-204ENST00000574911 TMEM2Q9UHN6 1383 aa11.27□□□□□ -0.61
NCBP3-204ENST00000574911 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
NCBP3-204ENST00000574911 TWISTNBQ3B726 338 aaPredicted RBP11.26□□□□□ -0.61
NCBP3-204ENST00000574911 IL27Q8NEV9 243 aa11.26□□□□□ -0.61
NCBP3-204ENST00000574911 ESF1Q9H501 851 aaKnown RBP11.26□□□□□ -0.61
NCBP3-204ENST00000574911 ROBO2Q9HCK4 1378 aa11.26□□□□□ -0.61
NCBP3-204ENST00000574911 C8orf58Q8NAV2 365 aa11.26□□□□□ -0.61
NCBP3-204ENST00000574911 GCC1Q96CN9 775 aa11.26□□□□□ -0.61
NCBP3-204ENST00000574911 ADAMTS13Q76LX8 1427 aa11.26□□□□□ -0.61
NCBP3-204ENST00000574911 LNPKQ9C0E8 428 aa11.25□□□□□ -0.61
NCBP3-204ENST00000574911 TOPAZ1Q8N9V7 1692 aa11.25□□□□□ -0.61
NCBP3-204ENST00000574911 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.25□□□□□ -0.61
NCBP3-204ENST00000574911 KIF24Q5T7B8 1368 aa11.25□□□□□ -0.61
NCBP3-204ENST00000574911 API5Q9BZZ5 524 aaKnown RBP11.24□□□□□ -0.61
NCBP3-204ENST00000574911 TTC21BQ7Z4L5 1316 aa11.24□□□□□ -0.61
NCBP3-204ENST00000574911 KIF13AQ9H1H9 1805 aa11.24□□□□□ -0.61
NCBP3-204ENST00000574911 FAM83GA6ND36 823 aa11.24□□□□□ -0.61
NCBP3-204ENST00000574911 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
NCBP3-204ENST00000574911 OVOS2A0A0J9YW53 1432 aa11.24□□□□□ -0.61
NCBP3-204ENST00000574911 OVOS2Q6IE36 1432 aa11.24□□□□□ -0.61
NCBP3-204ENST00000574911 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
NCBP3-204ENST00000574911 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
NCBP3-204ENST00000574911 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
NCBP3-204ENST00000574911 SIRT2Q8IXJ6 389 aa11.23□□□□□ -0.61
NCBP3-204ENST00000574911 C1orf115Q9H7X2 142 aa11.23□□□□□ -0.61
NCBP3-204ENST00000574911 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
NCBP3-204ENST00000574911 ANKRD45Q5TZF3 282 aa11.23□□□□□ -0.61
NCBP3-204ENST00000574911 DCTN1Q14203 1278 aa11.22□□□□□ -0.61
NCBP3-204ENST00000574911 PLEKHG1Q9ULL1 1385 aa11.22□□□□□ -0.61
NCBP3-204ENST00000574911 NALCNQ8IZF0 1738 aa11.22□□□□□ -0.61
NCBP3-204ENST00000574911 ACEP12821 1306 aa11.22□□□□□ -0.61
NCBP3-204ENST00000574911 AEBP1Q8IUX7 1158 aa11.22□□□□□ -0.61
NCBP3-204ENST00000574911 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
NCBP3-204ENST00000574911 RGPD1P0DJD0 1748 aa11.21□□□□□ -0.61
NCBP3-204ENST00000574911 USP6P35125 1406 aa11.21□□□□□ -0.61
NCBP3-204ENST00000574911 USP31Q70CQ4 1352 aa11.21□□□□□ -0.61
NCBP3-204ENST00000574911 PEAK1Q9H792 1746 aa11.21□□□□□ -0.62
NCBP3-204ENST00000574911 SULT6B1Q6IMI4 303 aa11.21□□□□□ -0.62
NCBP3-204ENST00000574911 SNX21Q969T3 373 aa11.21□□□□□ -0.62
NCBP3-204ENST00000574911 CHMP5Q9NZZ3 219 aa11.21□□□□□ -0.62
NCBP3-204ENST00000574911 SSH2Q76I76 1423 aa11.2□□□□□ -0.62
NCBP3-204ENST00000574911 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
NCBP3-204ENST00000574911 CHL1O00533 1208 aa11.2□□□□□ -0.62
NCBP3-204ENST00000574911 INTS3Q68E01 1043 aaKnown RBP11.2□□□□□ -0.62
NCBP3-204ENST00000574911 HSCBQ8IWL3 235 aa11.2□□□□□ -0.62
NCBP3-204ENST00000574911 SPRYD3Q8NCJ5 442 aa11.2□□□□□ -0.62
NCBP3-204ENST00000574911 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
NCBP3-204ENST00000574911 LTKP29376 864 aa11.19□□□□□ -0.62
NCBP3-204ENST00000574911 RGS12O14924 1447 aa11.19□□□□□ -0.62
NCBP3-204ENST00000574911 PTPRUQ92729 1446 aa11.19□□□□□ -0.62
NCBP3-204ENST00000574911 MCM4P33991 863 aa11.18□□□□□ -0.62
NCBP3-204ENST00000574911 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
NCBP3-204ENST00000574911 DDIT3P35638 169 aa11.18□□□□□ -0.62
NCBP3-204ENST00000574911 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
NCBP3-204ENST00000574911 CRB1P82279 1406 aa11.18□□□□□ -0.62
NCBP3-204ENST00000574911 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
NCBP3-204ENST00000574911 KIF2CQ99661 725 aa11.17□□□□□ -0.62
NCBP3-204ENST00000574911 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
NCBP3-204ENST00000574911 MCM10Q7L590 875 aa11.17□□□□□ -0.62
NCBP3-204ENST00000574911 ARHGEF10O15013 1369 aa11.17□□□□□ -0.62
NCBP3-204ENST00000574911 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
NCBP3-204ENST00000574911 KRT24Q2M2I5 525 aa11.16□□□□□ -0.62
NCBP3-204ENST00000574911 ANKRD44Q8N8A2 993 aa11.16□□□□□ -0.62
NCBP3-204ENST00000574911 PTPRCP08575 1304 aa11.16□□□□□ -0.62
NCBP3-204ENST00000574911 TTC21AQ8NDW8 1320 aa11.16□□□□□ -0.62
NCBP3-204ENST00000574911 NUTM2FA1L443 756 aa11.15□□□□□ -0.62
NCBP3-204ENST00000574911 PLEKHM2Q8IWE5 1019 aa11.15□□□□□ -0.62
NCBP3-204ENST00000574911 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms