RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-216ENST00000574344 SBF2Q86WG5 1849 aa13.59□□□□□ -0.23
NPLOC4-216ENST00000574344 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-216ENST00000574344 CSB-PGBD3P0DP91 1061 aa13.58□□□□□ -0.24
NPLOC4-216ENST00000574344 FAM196AQ6ZSG2 479 aa13.58□□□□□ -0.24
NPLOC4-216ENST00000574344 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
NPLOC4-216ENST00000574344 ABCC6O95255 1503 aa13.58□□□□□ -0.24
NPLOC4-216ENST00000574344 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
NPLOC4-216ENST00000574344 TRIM37O94972 964 aa13.57□□□□□ -0.24
NPLOC4-216ENST00000574344 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
NPLOC4-216ENST00000574344 USP47Q96K76 1375 aa13.57□□□□□ -0.24
NPLOC4-216ENST00000574344 KIF20BQ96Q89 1820 aa13.56□□□□□ -0.24
NPLOC4-216ENST00000574344 ARHGEF25Q86VW2 580 aa13.56□□□□□ -0.24
NPLOC4-216ENST00000574344 NME9Q86XW9 330 aa13.56□□□□□ -0.24
NPLOC4-216ENST00000574344 WDR17Q8IZU2 1322 aa13.56□□□□□ -0.24
NPLOC4-216ENST00000574344 RREB1Q92766 1687 aa13.56□□□□□ -0.24
NPLOC4-216ENST00000574344 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
NPLOC4-216ENST00000574344 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
NPLOC4-216ENST00000574344 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
NPLOC4-216ENST00000574344 USP31Q70CQ4 1352 aa13.55□□□□□ -0.24
NPLOC4-216ENST00000574344 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
NPLOC4-216ENST00000574344 OVOS2A0A0J9YW53 1432 aa13.55□□□□□ -0.24
NPLOC4-216ENST00000574344 OVOS2Q6IE36 1432 aa13.55□□□□□ -0.24
NPLOC4-216ENST00000574344 FAM208AQ9UK61 1670 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-216ENST00000574344 NUP188Q5SRE5 1749 aa13.54□□□□□ -0.24
NPLOC4-216ENST00000574344 PEAK1Q9H792 1746 aa13.54□□□□□ -0.24
NPLOC4-216ENST00000574344 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-216ENST00000574344 TESK2Q96S53 571 aa13.54□□□□□ -0.24
NPLOC4-216ENST00000574344 DISP2A7MBM2 1401 aa13.54□□□□□ -0.24
NPLOC4-216ENST00000574344 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
NPLOC4-216ENST00000574344 SRCAPQ6ZRS2 3230 aa13.53□□□□□ -0.24
NPLOC4-216ENST00000574344 TMF1P82094 1093 aa13.53□□□□□ -0.24
NPLOC4-216ENST00000574344 DDB1Q16531 1140 aa13.53□□□□□ -0.24
NPLOC4-216ENST00000574344 PSDA5PKW4 1024 aaPredicted RBP13.52□□□□□ -0.25
NPLOC4-216ENST00000574344 APBA3O96018 575 aa13.52□□□□□ -0.25
NPLOC4-216ENST00000574344 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
NPLOC4-216ENST00000574344 MYOM1P52179 1685 aa13.52□□□□□ -0.25
NPLOC4-216ENST00000574344 RGPD3A6NKT7 1758 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-216ENST00000574344 RGPD4Q7Z3J3 1758 aa13.51□□□□□ -0.25
NPLOC4-216ENST00000574344 LRP5O75197 1615 aa13.51□□□□□ -0.25
NPLOC4-216ENST00000574344 CCDC7Q96M83 1385 aa13.51□□□□□ -0.25
NPLOC4-216ENST00000574344 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
NPLOC4-216ENST00000574344 RGPD2P0DJD1 1756 aa13.5□□□□□ -0.25
NPLOC4-216ENST00000574344 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
NPLOC4-216ENST00000574344 C11orf95C9JLR9 678 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-216ENST00000574344 CCER1Q8TC90 406 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-216ENST00000574344 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-216ENST00000574344 CARD10Q9BWT7 1032 aa13.5□□□□□ -0.25
NPLOC4-216ENST00000574344 PARD3Q8TEW0 1356 aa13.49□□□□□ -0.25
NPLOC4-216ENST00000574344 COG3Q96JB2 828 aa13.49□□□□□ -0.25
NPLOC4-216ENST00000574344 NLRP2Q9NX02 1062 aa13.49□□□□□ -0.25
NPLOC4-216ENST00000574344 ERBB3P21860 1342 aa13.48□□□□□ -0.25
NPLOC4-216ENST00000574344 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
NPLOC4-216ENST00000574344 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
NPLOC4-216ENST00000574344 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
NPLOC4-216ENST00000574344 R3HDM1Q15032 1099 aaKnown RBP13.47□□□□□ -0.25
NPLOC4-216ENST00000574344 ANKRD24Q8TF21 1146 aa13.47□□□□□ -0.25
NPLOC4-216ENST00000574344 CAMKK2Q96RR4 588 aa13.47□□□□□ -0.25
NPLOC4-216ENST00000574344 EXOC5O00471 708 aa13.46□□□□□ -0.25
NPLOC4-216ENST00000574344 NHSQ6T4R5 1651 aa13.46□□□□□ -0.26
NPLOC4-216ENST00000574344 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-216ENST00000574344 LTV1Q96GA3 475 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-216ENST00000574344 AMPHP49418 695 aa13.44□□□□□ -0.26
NPLOC4-216ENST00000574344 POLR3GLQ9BT43 218 aa13.44□□□□□ -0.26
NPLOC4-216ENST00000574344 IL2RBP14784 551 aa13.43□□□□□ -0.26
NPLOC4-216ENST00000574344 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
NPLOC4-216ENST00000574344 IP6K1Q92551 441 aa13.43□□□□□ -0.26
NPLOC4-216ENST00000574344 GGNBP2Q9H3C7 697 aa13.43□□□□□ -0.26
NPLOC4-216ENST00000574344 BTAF1O14981 1849 aa13.43□□□□□ -0.26
NPLOC4-216ENST00000574344 MAP3K19Q56UN5 1328 aa13.42□□□□□ -0.26
NPLOC4-216ENST00000574344 NSD3Q9BZ95 1437 aa13.42□□□□□ -0.26
NPLOC4-216ENST00000574344 ANKRD26Q9UPS8 1709 aa13.42□□□□□ -0.26
NPLOC4-216ENST00000574344 MAP2P11137 1827 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-216ENST00000574344 SMG6Q86US8 1419 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-216ENST00000574344 HOXC9P31274 260 aa13.41□□□□□ -0.26
NPLOC4-216ENST00000574344 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-216ENST00000574344 RTL1A6NKG5 1358 aa13.41□□□□□ -0.26
NPLOC4-216ENST00000574344 DOT1LQ8TEK3 1739 aa13.41□□□□□ -0.26
NPLOC4-216ENST00000574344 SHANK3Q9BYB0 1731 aa13.41□□□□□ -0.26
NPLOC4-216ENST00000574344 BCL9O00512 1426 aa13.4□□□□□ -0.26
NPLOC4-216ENST00000574344 FBLN1P23142 703 aa13.4□□□□□ -0.26
NPLOC4-216ENST00000574344 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-216ENST00000574344 FYB1O15117 783 aa13.39□□□□□ -0.27
NPLOC4-216ENST00000574344 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
NPLOC4-216ENST00000574344 ACSBG1Q96GR2 724 aa13.39□□□□□ -0.27
NPLOC4-216ENST00000574344 PLSCR1O15162 318 aa13.38□□□□□ -0.27
NPLOC4-216ENST00000574344 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
NPLOC4-216ENST00000574344 CASZ1Q86V15 1759 aa13.36□□□□□ -0.27
NPLOC4-216ENST00000574344 DDX54Q8TDD1 881 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-216ENST00000574344 FLT4P35916 1363 aa13.35□□□□□ -0.27
NPLOC4-216ENST00000574344 MEGF6O75095 1541 aa13.35□□□□□ -0.27
NPLOC4-216ENST00000574344 KCNQ2O43526 872 aa13.35□□□□□ -0.27
NPLOC4-216ENST00000574344 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-216ENST00000574344 CGNL1Q0VF96 1302 aa13.35□□□□□ -0.27
NPLOC4-216ENST00000574344 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
NPLOC4-216ENST00000574344 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
NPLOC4-216ENST00000574344 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-216ENST00000574344 TXNRD1Q16881 649 aa13.33□□□□□ -0.28
NPLOC4-216ENST00000574344 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-216ENST00000574344 STK32BQ9NY57 414 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms