RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 ZNF784Q8NCA9 323 aaPredicted RBP17.75■□□□□ 0.43
PRPF8-208ENST00000573716 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
PRPF8-208ENST00000573716 STK32BQ9NY57 414 aa17.74■□□□□ 0.43
PRPF8-208ENST00000573716 MARCH10Q8NA82 808 aaPredicted RBP17.73■□□□□ 0.43
PRPF8-208ENST00000573716 AATKQ6ZMQ8 1374 aa17.73■□□□□ 0.43
PRPF8-208ENST00000573716 PROM2Q8N271 834 aa17.72■□□□□ 0.43
PRPF8-208ENST00000573716 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
PRPF8-208ENST00000573716 SOX12O15370 315 aa17.71■□□□□ 0.43
PRPF8-208ENST00000573716 CSB-PGBD3P0DP91 1061 aa17.71■□□□□ 0.43
PRPF8-208ENST00000573716 PTGER2P43116 358 aa17.71■□□□□ 0.43
PRPF8-208ENST00000573716 FHDC1Q9C0D6 1143 aaPredicted RBP17.71■□□□□ 0.43
PRPF8-208ENST00000573716 KIAA1210Q9ULL0 1709 aa17.71■□□□□ 0.43
PRPF8-208ENST00000573716 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
PRPF8-208ENST00000573716 TXNRD1Q16881 649 aa17.7■□□□□ 0.42
PRPF8-208ENST00000573716 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
PRPF8-208ENST00000573716 CABP1Q9NZU7 370 aa17.7■□□□□ 0.42
PRPF8-208ENST00000573716 SLIT3O75094 1523 aa17.7■□□□□ 0.42
PRPF8-208ENST00000573716 WDR17Q8IZU2 1322 aa17.7■□□□□ 0.42
PRPF8-208ENST00000573716 CENPJQ9HC77 1338 aaPredicted RBP17.7■□□□□ 0.42
PRPF8-208ENST00000573716 COL18A1P39060 1754 aa17.69■□□□□ 0.42
PRPF8-208ENST00000573716 CHD4Q14839 1912 aa17.69■□□□□ 0.42
PRPF8-208ENST00000573716 QRICH2Q9H0J4 1663 aa17.69■□□□□ 0.42
PRPF8-208ENST00000573716 SYT17Q9BSW7 474 aa17.69■□□□□ 0.42
PRPF8-208ENST00000573716 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
PRPF8-208ENST00000573716 USP6P35125 1406 aa17.69■□□□□ 0.42
PRPF8-208ENST00000573716 BRD4O60885 1362 aaPredicted RBP17.68■□□□□ 0.42
PRPF8-208ENST00000573716 PIK3C2AO00443 1686 aa17.68■□□□□ 0.42
PRPF8-208ENST00000573716 SLC15A2Q16348 729 aa17.68■□□□□ 0.42
PRPF8-208ENST00000573716 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
PRPF8-208ENST00000573716 CPSF1Q10570 1443 aaKnown RBP17.66■□□□□ 0.42
PRPF8-208ENST00000573716 MTFR1LQ9H019 292 aa17.66■□□□□ 0.42
PRPF8-208ENST00000573716 EXOC5O00471 708 aa17.65■□□□□ 0.42
PRPF8-208ENST00000573716 ACSBG1Q96GR2 724 aa17.64■□□□□ 0.41
PRPF8-208ENST00000573716 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
PRPF8-208ENST00000573716 ARXQ96QS3 562 aa17.63■□□□□ 0.41
PRPF8-208ENST00000573716 KAT6BQ8WYB5 2073 aa17.63■□□□□ 0.41
PRPF8-208ENST00000573716 BCL9O00512 1426 aa17.63■□□□□ 0.41
PRPF8-208ENST00000573716 C1QTNF8P60827 252 aa17.62■□□□□ 0.41
PRPF8-208ENST00000573716 ARHGEF25Q86VW2 580 aa17.62■□□□□ 0.41
PRPF8-208ENST00000573716 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
PRPF8-208ENST00000573716 KCNH5Q8NCM2 988 aa17.61■□□□□ 0.41
PRPF8-208ENST00000573716 NHSQ6T4R5 1651 aa17.61■□□□□ 0.41
PRPF8-208ENST00000573716 GPR162Q16538 588 aa17.6■□□□□ 0.41
PRPF8-208ENST00000573716 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
PRPF8-208ENST00000573716 TNS2Q63HR2 1409 aa17.59■□□□□ 0.41
PRPF8-208ENST00000573716 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
PRPF8-208ENST00000573716 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
PRPF8-208ENST00000573716 CCDC7Q96M83 1385 aa17.58■□□□□ 0.4
PRPF8-208ENST00000573716 EVC2Q86UK5 1308 aa17.58■□□□□ 0.4
PRPF8-208ENST00000573716 BTAF1O14981 1849 aa17.57■□□□□ 0.4
PRPF8-208ENST00000573716 TRPM1Q7Z4N2 1603 aa17.57■□□□□ 0.4
PRPF8-208ENST00000573716 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
PRPF8-208ENST00000573716 ZNF827Q17R98 1081 aa17.55■□□□□ 0.4
PRPF8-208ENST00000573716 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
PRPF8-208ENST00000573716 NFAT5O94916 1531 aa17.55■□□□□ 0.4
PRPF8-208ENST00000573716 UTRNP46939 3433 aa17.55■□□□□ 0.4
PRPF8-208ENST00000573716 PAPPAQ13219 1627 aa17.54■□□□□ 0.4
PRPF8-208ENST00000573716 TTC21AQ8NDW8 1320 aa17.54■□□□□ 0.4
PRPF8-208ENST00000573716 ABCC6O95255 1503 aa17.54■□□□□ 0.4
PRPF8-208ENST00000573716 GIGYF1O75420 1035 aaPredicted RBP17.54■□□□□ 0.4
PRPF8-208ENST00000573716 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
PRPF8-208ENST00000573716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.52■□□□□ 0.4
PRPF8-208ENST00000573716 MAP3K5Q99683 1374 aa17.52■□□□□ 0.39
PRPF8-208ENST00000573716 IL2RBP14784 551 aa17.51■□□□□ 0.39
PRPF8-208ENST00000573716 POLD1P28340 1107 aa17.51■□□□□ 0.39
PRPF8-208ENST00000573716 LTN1O94822 1766 aa17.51■□□□□ 0.39
PRPF8-208ENST00000573716 LRRC4BQ9NT99 713 aa17.5■□□□□ 0.39
PRPF8-208ENST00000573716 ERBB3P21860 1342 aa17.48■□□□□ 0.39
PRPF8-208ENST00000573716 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
PRPF8-208ENST00000573716 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
PRPF8-208ENST00000573716 ANKRD24Q8TF21 1146 aa17.47■□□□□ 0.39
PRPF8-208ENST00000573716 TFCP2L1Q9NZI6 479 aa17.47■□□□□ 0.39
PRPF8-208ENST00000573716 KCNQ4P56696 695 aa17.46■□□□□ 0.39
PRPF8-208ENST00000573716 IFFO2Q5TF58 517 aa17.46■□□□□ 0.39
PRPF8-208ENST00000573716 NME9Q86XW9 330 aa17.46■□□□□ 0.39
PRPF8-208ENST00000573716 NLGN2Q8NFZ4 835 aa17.46■□□□□ 0.39
PRPF8-208ENST00000573716 SLC16A10Q8TF71 515 aa17.46■□□□□ 0.39
PRPF8-208ENST00000573716 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
PRPF8-208ENST00000573716 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
PRPF8-208ENST00000573716 TUBGCP6Q96RT7 1819 aa17.46■□□□□ 0.39
PRPF8-208ENST00000573716 QSER1Q2KHR3 1735 aa17.45■□□□□ 0.38
PRPF8-208ENST00000573716 MSH5O43196 834 aa17.45■□□□□ 0.38
PRPF8-208ENST00000573716 L3MBTL2Q969R5 705 aa17.45■□□□□ 0.38
PRPF8-208ENST00000573716 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
PRPF8-208ENST00000573716 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
PRPF8-208ENST00000573716 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
PRPF8-208ENST00000573716 SLC27A3Q5K4L6 730 aa17.43■□□□□ 0.38
PRPF8-208ENST00000573716 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
PRPF8-208ENST00000573716 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
PRPF8-208ENST00000573716 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
PRPF8-208ENST00000573716 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
PRPF8-208ENST00000573716 USP54Q70EL1 1684 aa17.4■□□□□ 0.38
PRPF8-208ENST00000573716 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
PRPF8-208ENST00000573716 COL24A1Q17RW2 1714 aa17.4■□□□□ 0.38
PRPF8-208ENST00000573716 YBX3P16989 372 aaKnown RBP eCLIP17.39■□□□□ 0.37
PRPF8-208ENST00000573716 GRIN3BO60391 1043 aa17.38■□□□□ 0.37
PRPF8-208ENST00000573716 MSL1Q68DK7 614 aa17.38■□□□□ 0.37
PRPF8-208ENST00000573716 HDGFL2Q7Z4V5 671 aaPredicted RBP17.38■□□□□ 0.37
PRPF8-208ENST00000573716 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
PRPF8-208ENST00000573716 CCNL1Q9UK58 526 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms