RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 SPATA31A5Q5VU36 1347 aa29.17■■■□□ 2.26
ABR-221ENST00000573559 SPATA31A7Q8IWB4 1347 aa29.17■■■□□ 2.26
ABR-221ENST00000573559 CGNL1Q0VF96 1302 aa29.15■■■□□ 2.26
ABR-221ENST00000573559 ABCC6O95255 1503 aa29.15■■■□□ 2.26
ABR-221ENST00000573559 CCDC7Q96M83 1385 aa29.14■■■□□ 2.26
ABR-221ENST00000573559 A0A0G2JS52 829 aa29.14■■■□□ 2.26
ABR-221ENST00000573559 MYT1Q01538 1121 aa29.14■■■□□ 2.26
ABR-221ENST00000573559 LARP1Q6PKG0 1096 aaKnown RBP29.14■■■□□ 2.26
ABR-221ENST00000573559 USP35Q9P2H5 1018 aa29.13■■■□□ 2.25
ABR-221ENST00000573559 AXIN2Q9Y2T1 843 aa29.13■■■□□ 2.25
ABR-221ENST00000573559 FAM98CQ17RN3 349 aaKnown RBP29.12■■■□□ 2.25
ABR-221ENST00000573559 SPATA31A1Q5TZJ5 1347 aa29.12■■■□□ 2.25
ABR-221ENST00000573559 ANKRD26Q9UPS8 1709 aa29.1■■■□□ 2.25
ABR-221ENST00000573559 WASHC2AQ641Q2 1341 aa29.1■■■□□ 2.25
ABR-221ENST00000573559 BRWD3Q6RI45 1802 aa29.09■■■□□ 2.25
ABR-221ENST00000573559 FBLN1P23142 703 aa29.09■■■□□ 2.25
ABR-221ENST00000573559 SEPT12Q8IYM1 358 aa29.09■■■□□ 2.25
ABR-221ENST00000573559 CRB1P82279 1406 aa29.09■■■□□ 2.25
ABR-221ENST00000573559 CSB-PGBD3P0DP91 1061 aa29.08■■■□□ 2.25
ABR-221ENST00000573559 MAP3K19Q56UN5 1328 aa29.07■■■□□ 2.24
ABR-221ENST00000573559 TOM1L2Q6ZVM7 507 aa29.07■■■□□ 2.24
ABR-221ENST00000573559 WDR17Q8IZU2 1322 aa29.06■■■□□ 2.24
ABR-221ENST00000573559 ZEB1P37275 1124 aaPredicted RBP29.05■■■□□ 2.24
ABR-221ENST00000573559 AMPHP49418 695 aa29.05■■■□□ 2.24
ABR-221ENST00000573559 RRS1Q15050 365 aaKnown RBP29.05■■■□□ 2.24
ABR-221ENST00000573559 KNSTRNQ9Y448 316 aa29.05■■■□□ 2.24
ABR-221ENST00000573559 THSD7AQ9UPZ6 1657 aa29.05■■■□□ 2.24
ABR-221ENST00000573559 TCP11L2Q8N4U5 519 aa29.04■■■□□ 2.24
ABR-221ENST00000573559 ONECUT3O60422 494 aaPredicted RBP29.03■■■□□ 2.24
ABR-221ENST00000573559 BLMP54132 1417 aaPredicted RBP29.03■■■□□ 2.24
ABR-221ENST00000573559 IP6K1Q92551 441 aa29.02■■■□□ 2.24
ABR-221ENST00000573559 NSD2O96028 1365 aa29.01■■■□□ 2.23
ABR-221ENST00000573559 ERBB3P21860 1342 aa29■■■□□ 2.23
ABR-221ENST00000573559 ANKRD24Q8TF21 1146 aa29■■■□□ 2.23
ABR-221ENST00000573559 RTL1A6NKG5 1358 aa29■■■□□ 2.23
ABR-221ENST00000573559 HOXC9P31274 260 aa28.99■■■□□ 2.23
ABR-221ENST00000573559 BARGINQ6ZT62 677 aa28.99■■■□□ 2.23
ABR-221ENST00000573559 THRAP3Q9Y2W1 955 aaKnown RBP28.99■■■□□ 2.23
ABR-221ENST00000573559 WNK3Q9BYP7 1800 aa28.99■■■□□ 2.23
ABR-221ENST00000573559 LTV1Q96GA3 475 aaPredicted RBP28.98■■■□□ 2.23
ABR-221ENST00000573559 PEAK1Q9H792 1746 aa28.97■■■□□ 2.23
ABR-221ENST00000573559 TNNT2P45379 298 aaPredicted RBP28.97■■■□□ 2.23
ABR-221ENST00000573559 MAP2P11137 1827 aaKnown RBP28.97■■■□□ 2.23
ABR-221ENST00000573559 FAM208AQ9UK61 1670 aaKnown RBP28.96■■■□□ 2.23
ABR-221ENST00000573559 KRT27Q7Z3Y8 459 aa28.96■■■□□ 2.23
ABR-221ENST00000573559 CARD10Q9BWT7 1032 aa28.95■■■□□ 2.22
ABR-221ENST00000573559 NLRP2Q9NX02 1062 aa28.95■■■□□ 2.22
ABR-221ENST00000573559 EMILIN1Q9Y6C2 1016 aa28.94■■■□□ 2.22
ABR-221ENST00000573559 FLT4P35916 1363 aa28.93■■■□□ 2.22
ABR-221ENST00000573559 PPM1GO15355 546 aaPredicted RBP28.93■■■□□ 2.22
ABR-221ENST00000573559 MORC1Q86VD1 984 aa28.93■■■□□ 2.22
ABR-221ENST00000573559 PARP4Q9UKK3 1724 aaKnown RBP28.93■■■□□ 2.22
ABR-221ENST00000573559 KIF24Q5T7B8 1368 aa28.91■■■□□ 2.22
ABR-221ENST00000573559 AMER1Q5JTC6 1135 aaPredicted RBP28.91■■■□□ 2.22
ABR-221ENST00000573559 UPF1Q92900 1129 aaKnown RBP eCLIP28.91■■■□□ 2.22
ABR-221ENST00000573559 SMG6Q86US8 1419 aaKnown RBP28.9■■■□□ 2.22
ABR-221ENST00000573559 RGPD2P0DJD1 1756 aa28.9■■■□□ 2.22
ABR-221ENST00000573559 LRRC37A3O60309 1634 aa28.9■■■□□ 2.22
ABR-221ENST00000573559 PER1O15534 1290 aaPredicted RBP28.89■■■□□ 2.22
ABR-221ENST00000573559 HSP90AB2PQ58FF8 381 aa28.88■■■□□ 2.21
ABR-221ENST00000573559 INSRP06213 1382 aa28.88■■■□□ 2.21
ABR-221ENST00000573559 CNGB1Q14028 1251 aaPredicted RBP28.87■■■□□ 2.21
ABR-221ENST00000573559 PDE3BQ13370 1112 aa28.86■■■□□ 2.21
ABR-221ENST00000573559 CC2D1BQ5T0F9 858 aaKnown RBP28.86■■■□□ 2.21
ABR-221ENST00000573559 FAM182BQ5T319 152 aa28.86■■■□□ 2.21
ABR-221ENST00000573559 POLKQ9UBT6 870 aa28.86■■■□□ 2.21
ABR-221ENST00000573559 DISP2A7MBM2 1401 aa28.86■■■□□ 2.21
ABR-221ENST00000573559 CDCA7Q9BWT1 371 aaPredicted RBP28.85■■■□□ 2.21
ABR-221ENST00000573559 DDB1Q16531 1140 aa28.82■■■□□ 2.2
ABR-221ENST00000573559 EP400Q96L91 3159 aa28.82■■■□□ 2.2
ABR-221ENST00000573559 IL2RBP14784 551 aa28.8■■■□□ 2.2
ABR-221ENST00000573559 NPC1L1Q9UHC9 1359 aa28.78■■■□□ 2.2
ABR-221ENST00000573559 USHBP1Q8N6Y0 703 aa28.78■■■□□ 2.2
ABR-221ENST00000573559 TNS2Q63HR2 1409 aa28.77■■■□□ 2.2
ABR-221ENST00000573559 NBPF6Q5VWK0 638 aa28.77■■■□□ 2.2
ABR-221ENST00000573559 NBPF4Q96M43 638 aa28.77■■■□□ 2.2
ABR-221ENST00000573559 EXOC5O00471 708 aa28.75■■■□□ 2.19
ABR-221ENST00000573559 FAM196AQ6ZSG2 479 aa28.74■■■□□ 2.19
ABR-221ENST00000573559 OVOS2A0A0G2JMS6 1433 aa28.74■■■□□ 2.19
ABR-221ENST00000573559 RGPD1P0DJD0 1748 aa28.74■■■□□ 2.19
ABR-221ENST00000573559 SF3B2Q13435 895 aaKnown RBP28.73■■■□□ 2.19
ABR-221ENST00000573559 CCDC125Q86Z20 511 aa28.72■■■□□ 2.19
ABR-221ENST00000573559 MEGF6O75095 1541 aa28.71■■■□□ 2.19
ABR-221ENST00000573559 EIF4A2Q14240 407 aaKnown RBP28.71■■■□□ 2.19
ABR-221ENST00000573559 MARCH10Q8NA82 808 aaPredicted RBP28.69■■■□□ 2.18
ABR-221ENST00000573559 RAPGEF4Q8WZA2 1011 aa28.69■■■□□ 2.18
ABR-221ENST00000573559 TNS1Q9HBL0 1735 aaKnown RBP28.68■■■□□ 2.18
ABR-221ENST00000573559 MTHFSP49914 203 aa28.67■■■□□ 2.18
ABR-221ENST00000573559 DDX10Q13206 875 aaKnown RBP28.67■■■□□ 2.18
ABR-221ENST00000573559 TRIM37O94972 964 aa28.66■■■□□ 2.18
ABR-221ENST00000573559 EYA1Q99502 592 aa28.66■■■□□ 2.18
ABR-221ENST00000573559 TATP17735 454 aaPredicted RBP28.65■■■□□ 2.18
ABR-221ENST00000573559 SBF2Q86WG5 1849 aa28.64■■■□□ 2.18
ABR-221ENST00000573559 NCAPD2Q15021 1401 aa28.64■■■□□ 2.18
ABR-221ENST00000573559 SHANK3Q9BYB0 1731 aa28.63■■■□□ 2.17
ABR-221ENST00000573559 DDX54Q8TDD1 881 aaKnown RBP28.62■■■□□ 2.17
ABR-221ENST00000573559 DEFB132Q7Z7B7 95 aa28.61■■■□□ 2.17
ABR-221ENST00000573559 ZCRB1Q8TBF4 217 aaKnown RBP28.61■■■□□ 2.17
ABR-221ENST00000573559 BAG6P46379 1132 aa28.6■■■□□ 2.17
ABR-221ENST00000573559 IGSF1Q8N6C5 1336 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms