RNA–Protein interactions for RNA: ENST00000573548.1

RNF213-216, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-216ENST00000573548 WDR43Q15061 677 aaKnown RBP eCLIP17.79■□□□□ 0.44
RNF213-216ENST00000573548 USP19O94966 1318 aa17.78■□□□□ 0.44
RNF213-216ENST00000573548 PLEKHG5O94827 1062 aa17.78■□□□□ 0.44
RNF213-216ENST00000573548 UPF1Q92900 1129 aaKnown RBP eCLIP17.78■□□□□ 0.44
RNF213-216ENST00000573548 PHRF1Q9P1Y6 1649 aaKnown RBP17.78■□□□□ 0.44
RNF213-216ENST00000573548 NRAPQ86VF7 1730 aa17.78■□□□□ 0.44
RNF213-216ENST00000573548 KIF24Q5T7B8 1368 aa17.78■□□□□ 0.44
RNF213-216ENST00000573548 RRS1Q15050 365 aaKnown RBP17.77■□□□□ 0.44
RNF213-216ENST00000573548 CABLES1Q8TDN4 633 aa17.77■□□□□ 0.44
RNF213-216ENST00000573548 COL14A1Q05707 1796 aaKnown RBP17.76■□□□□ 0.43
RNF213-216ENST00000573548 DIAPH1O60610 1272 aaKnown RBP17.76■□□□□ 0.43
RNF213-216ENST00000573548 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
RNF213-216ENST00000573548 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
RNF213-216ENST00000573548 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
RNF213-216ENST00000573548 UNC5CLQ8IV45 518 aa17.74■□□□□ 0.43
RNF213-216ENST00000573548 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
RNF213-216ENST00000573548 PNNQ9H307 717 aaKnown RBP17.74■□□□□ 0.43
RNF213-216ENST00000573548 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
RNF213-216ENST00000573548 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
RNF213-216ENST00000573548 FBLN1P23142 703 aa17.73■□□□□ 0.43
RNF213-216ENST00000573548 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
RNF213-216ENST00000573548 FLT4P35916 1363 aa17.73■□□□□ 0.43
RNF213-216ENST00000573548 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
RNF213-216ENST00000573548 INSRP06213 1382 aa17.72■□□□□ 0.43
RNF213-216ENST00000573548 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
RNF213-216ENST00000573548 IP6K1Q92551 441 aa17.72■□□□□ 0.43
RNF213-216ENST00000573548 GJD4Q96KN9 370 aaPredicted RBP17.72■□□□□ 0.43
RNF213-216ENST00000573548 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
RNF213-216ENST00000573548 CCDC184Q52MB2 194 aa17.71■□□□□ 0.43
RNF213-216ENST00000573548 BRWD3Q6RI45 1802 aa17.7■□□□□ 0.42
RNF213-216ENST00000573548 NEFMP07197 916 aa17.7■□□□□ 0.42
RNF213-216ENST00000573548 HOXC9P31274 260 aa17.7■□□□□ 0.42
RNF213-216ENST00000573548 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
RNF213-216ENST00000573548 SLIT3O75094 1523 aa17.69■□□□□ 0.42
RNF213-216ENST00000573548 USP54Q70EL1 1684 aa17.69■□□□□ 0.42
RNF213-216ENST00000573548 U2SURPO15042 1029 aaKnown RBP17.69■□□□□ 0.42
RNF213-216ENST00000573548 PRDM11Q9NQV5 511 aa17.69■□□□□ 0.42
RNF213-216ENST00000573548 EP400Q96L91 3159 aa17.68■□□□□ 0.42
RNF213-216ENST00000573548 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
RNF213-216ENST00000573548 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
RNF213-216ENST00000573548 CPDO75976 1380 aa17.67■□□□□ 0.42
RNF213-216ENST00000573548 VPS72Q15906 364 aa17.67■□□□□ 0.42
RNF213-216ENST00000573548 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
RNF213-216ENST00000573548 CCDC9Q9Y3X0 531 aaKnown RBP17.66■□□□□ 0.42
RNF213-216ENST00000573548 IL13P35225 146 aa17.65■□□□□ 0.42
RNF213-216ENST00000573548 ADAMTS8Q9UP79 889 aa17.65■□□□□ 0.42
RNF213-216ENST00000573548 KIAA0232Q92628 1395 aa17.65■□□□□ 0.42
RNF213-216ENST00000573548 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.42
RNF213-216ENST00000573548 NFAT5O94916 1531 aa17.64■□□□□ 0.41
RNF213-216ENST00000573548 FAM83GA6ND36 823 aa17.64■□□□□ 0.41
RNF213-216ENST00000573548 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
RNF213-216ENST00000573548 FCHSD2O94868 740 aa17.63■□□□□ 0.41
RNF213-216ENST00000573548 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
RNF213-216ENST00000573548 EVA1CP58658 441 aa17.63■□□□□ 0.41
RNF213-216ENST00000573548 LTV1Q96GA3 475 aaPredicted RBP17.63■□□□□ 0.41
RNF213-216ENST00000573548 BTG4Q9NY30 223 aa17.63■□□□□ 0.41
RNF213-216ENST00000573548 THSD7AQ9UPZ6 1657 aa17.61■□□□□ 0.41
RNF213-216ENST00000573548 CHRNA2Q15822 529 aa17.61■□□□□ 0.41
RNF213-216ENST00000573548 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
RNF213-216ENST00000573548 LMO7Q8WWI1 1683 aa17.61■□□□□ 0.41
RNF213-216ENST00000573548 MAP2P11137 1827 aaKnown RBP17.61■□□□□ 0.41
RNF213-216ENST00000573548 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
RNF213-216ENST00000573548 RUNDC1Q96C34 613 aa17.6■□□□□ 0.41
RNF213-216ENST00000573548 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
RNF213-216ENST00000573548 ABCC6O95255 1503 aa17.59■□□□□ 0.41
RNF213-216ENST00000573548 A0A0G2JS52 829 aa17.59■□□□□ 0.41
RNF213-216ENST00000573548 MYT1Q01538 1121 aa17.59■□□□□ 0.41
RNF213-216ENST00000573548 SEPT12Q8IYM1 358 aa17.59■□□□□ 0.41
RNF213-216ENST00000573548 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
RNF213-216ENST00000573548 COL3A1P02461 1466 aaPredicted RBP17.57■□□□□ 0.4
RNF213-216ENST00000573548 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.4
RNF213-216ENST00000573548 SULT6B1Q6IMI4 303 aa17.57■□□□□ 0.4
RNF213-216ENST00000573548 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
RNF213-216ENST00000573548 ERBB3P21860 1342 aa17.56■□□□□ 0.4
RNF213-216ENST00000573548 FAM98CQ17RN3 349 aaKnown RBP17.56■□□□□ 0.4
RNF213-216ENST00000573548 EYA1Q99502 592 aa17.56■□□□□ 0.4
RNF213-216ENST00000573548 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
RNF213-216ENST00000573548 SPATA31A5Q5VU36 1347 aa17.55■□□□□ 0.4
RNF213-216ENST00000573548 SPATA31A7Q8IWB4 1347 aa17.55■□□□□ 0.4
RNF213-216ENST00000573548 HMOX1P09601 288 aa17.55■□□□□ 0.4
RNF213-216ENST00000573548 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
RNF213-216ENST00000573548 IGSF1Q8N6C5 1336 aa17.54■□□□□ 0.4
RNF213-216ENST00000573548 ONECUT3O60422 494 aaPredicted RBP17.54■□□□□ 0.4
RNF213-216ENST00000573548 KRT27Q7Z3Y8 459 aa17.54■□□□□ 0.4
RNF213-216ENST00000573548 CCDC125Q86Z20 511 aa17.54■□□□□ 0.4
RNF213-216ENST00000573548 RGPD1P0DJD0 1748 aa17.54■□□□□ 0.4
RNF213-216ENST00000573548 CAMTA1Q9Y6Y1 1673 aa17.54■□□□□ 0.4
RNF213-216ENST00000573548 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
RNF213-216ENST00000573548 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
RNF213-216ENST00000573548 RSPH6AQ9H0K4 717 aa17.53■□□□□ 0.4
RNF213-216ENST00000573548 STRN4Q9NRL3 753 aa17.53■□□□□ 0.4
RNF213-216ENST00000573548 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
RNF213-216ENST00000573548 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
RNF213-216ENST00000573548 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.4
RNF213-216ENST00000573548 RAPGEF4Q8WZA2 1011 aa17.52■□□□□ 0.4
RNF213-216ENST00000573548 NBPF4Q96M43 638 aa17.52■□□□□ 0.4
RNF213-216ENST00000573548 COL5A2P05997 1499 aaPredicted RBP17.51■□□□□ 0.39
RNF213-216ENST00000573548 PEAK1Q9H792 1746 aa17.51■□□□□ 0.39
RNF213-216ENST00000573548 LTN1O94822 1766 aa17.51■□□□□ 0.39
RNF213-216ENST00000573548 SPATA31A1Q5TZJ5 1347 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms