RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 DDB1Q16531 1140 aa17.32■□□□□ 0.36
TRIM25-207ENST00000573108 PTF1AQ7RTS3 328 aa17.32■□□□□ 0.36
TRIM25-207ENST00000573108 RGPD3A6NKT7 1758 aaPredicted RBP17.32■□□□□ 0.36
TRIM25-207ENST00000573108 RGPD4Q7Z3J3 1758 aa17.32■□□□□ 0.36
TRIM25-207ENST00000573108 WDR17Q8IZU2 1322 aa17.31■□□□□ 0.36
TRIM25-207ENST00000573108 SOX12O15370 315 aa17.31■□□□□ 0.36
TRIM25-207ENST00000573108 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
TRIM25-207ENST00000573108 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
TRIM25-207ENST00000573108 C11orf95C9JLR9 678 aaPredicted RBP17.29■□□□□ 0.36
TRIM25-207ENST00000573108 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
TRIM25-207ENST00000573108 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
TRIM25-207ENST00000573108 NFAT5O94916 1531 aa17.29■□□□□ 0.36
TRIM25-207ENST00000573108 ZNF692Q9BU19 519 aaPredicted RBP17.28■□□□□ 0.36
TRIM25-207ENST00000573108 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.36
TRIM25-207ENST00000573108 PLSCR1O15162 318 aa17.27■□□□□ 0.36
TRIM25-207ENST00000573108 KCNH5Q8NCM2 988 aa17.27■□□□□ 0.36
TRIM25-207ENST00000573108 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
TRIM25-207ENST00000573108 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
TRIM25-207ENST00000573108 TTC21AQ8NDW8 1320 aa17.26■□□□□ 0.35
TRIM25-207ENST00000573108 CASZ1Q86V15 1759 aa17.26■□□□□ 0.35
TRIM25-207ENST00000573108 KCNQ2O43526 872 aa17.26■□□□□ 0.35
TRIM25-207ENST00000573108 SPON1Q9HCB6 807 aa17.26■□□□□ 0.35
TRIM25-207ENST00000573108 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
TRIM25-207ENST00000573108 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
TRIM25-207ENST00000573108 PROM2Q8N271 834 aa17.25■□□□□ 0.35
TRIM25-207ENST00000573108 CARD10Q9BWT7 1032 aa17.25■□□□□ 0.35
TRIM25-207ENST00000573108 CDCA7Q9BWT1 371 aaPredicted RBP17.24■□□□□ 0.35
TRIM25-207ENST00000573108 PPP1R1BQ9UD71 204 aaPredicted RBP17.24■□□□□ 0.35
TRIM25-207ENST00000573108 BCL9O00512 1426 aa17.23■□□□□ 0.35
TRIM25-207ENST00000573108 PDGFDQ9GZP0 370 aaPredicted RBP17.23■□□□□ 0.35
TRIM25-207ENST00000573108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRIM25-207ENST00000573108 CD163L1Q9NR16 1453 aa17.22■□□□□ 0.35
TRIM25-207ENST00000573108 USP54Q70EL1 1684 aa17.22■□□□□ 0.35
TRIM25-207ENST00000573108 LTN1O94822 1766 aa17.21■□□□□ 0.35
TRIM25-207ENST00000573108 ABCC6O95255 1503 aa17.21■□□□□ 0.34
TRIM25-207ENST00000573108 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
TRIM25-207ENST00000573108 EXOC5O00471 708 aa17.2■□□□□ 0.34
TRIM25-207ENST00000573108 TNS2Q63HR2 1409 aa17.2■□□□□ 0.34
TRIM25-207ENST00000573108 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
TRIM25-207ENST00000573108 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
TRIM25-207ENST00000573108 NINLQ9Y2I6 1382 aa17.19■□□□□ 0.34
TRIM25-207ENST00000573108 TXNRD1Q16881 649 aa17.19■□□□□ 0.34
TRIM25-207ENST00000573108 NME9Q86XW9 330 aa17.19■□□□□ 0.34
TRIM25-207ENST00000573108 NHSQ6T4R5 1651 aa17.18■□□□□ 0.34
TRIM25-207ENST00000573108 ZBTB7AO95365 584 aa17.18■□□□□ 0.34
TRIM25-207ENST00000573108 YY1P25490 414 aa17.18■□□□□ 0.34
TRIM25-207ENST00000573108 MYOM1P52179 1685 aa17.17■□□□□ 0.34
TRIM25-207ENST00000573108 ERBB3P21860 1342 aa17.17■□□□□ 0.34
TRIM25-207ENST00000573108 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
TRIM25-207ENST00000573108 ACSBG1Q96GR2 724 aa17.16■□□□□ 0.34
TRIM25-207ENST00000573108 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
TRIM25-207ENST00000573108 SLC12A5Q9H2X9 1139 aa17.15■□□□□ 0.34
TRIM25-207ENST00000573108 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
TRIM25-207ENST00000573108 PTGER2P43116 358 aa17.14■□□□□ 0.33
TRIM25-207ENST00000573108 SLC15A2Q16348 729 aa17.14■□□□□ 0.33
TRIM25-207ENST00000573108 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
TRIM25-207ENST00000573108 ATF5Q9Y2D1 282 aaPredicted RBP17.14■□□□□ 0.33
TRIM25-207ENST00000573108 EDC4Q6P2E9 1401 aaKnown RBP17.13■□□□□ 0.33
TRIM25-207ENST00000573108 BTAF1O14981 1849 aa17.12■□□□□ 0.33
TRIM25-207ENST00000573108 PAPPAQ13219 1627 aa17.12■□□□□ 0.33
TRIM25-207ENST00000573108 IL2RBP14784 551 aa17.12■□□□□ 0.33
TRIM25-207ENST00000573108 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
TRIM25-207ENST00000573108 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
TRIM25-207ENST00000573108 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
TRIM25-207ENST00000573108 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
TRIM25-207ENST00000573108 KAT6BQ8WYB5 2073 aa17.08■□□□□ 0.33
TRIM25-207ENST00000573108 SGIP1Q9BQI5 828 aa17.08■□□□□ 0.32
TRIM25-207ENST00000573108 PCGF6Q9BYE7 350 aa17.08■□□□□ 0.32
TRIM25-207ENST00000573108 TERF2IPQ9NYB0 399 aa17.08■□□□□ 0.32
TRIM25-207ENST00000573108 FHDC1Q9C0D6 1143 aaPredicted RBP17.07■□□□□ 0.32
TRIM25-207ENST00000573108 MTFR1LQ9H019 292 aa17.07■□□□□ 0.32
TRIM25-207ENST00000573108 UTRNP46939 3433 aa17.06■□□□□ 0.32
TRIM25-207ENST00000573108 TONSLQ96HA7 1378 aa17.06■□□□□ 0.32
TRIM25-207ENST00000573108 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
TRIM25-207ENST00000573108 IP6K1Q92551 441 aa17.06■□□□□ 0.32
TRIM25-207ENST00000573108 LTV1Q96GA3 475 aaPredicted RBP17.06■□□□□ 0.32
TRIM25-207ENST00000573108 FAM208AQ9UK61 1670 aaKnown RBP17.06■□□□□ 0.32
TRIM25-207ENST00000573108 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
TRIM25-207ENST00000573108 SYT17Q9BSW7 474 aa17.05■□□□□ 0.32
TRIM25-207ENST00000573108 LRRC4BQ9NT99 713 aa17.05■□□□□ 0.32
TRIM25-207ENST00000573108 FBLN1P23142 703 aa17.04■□□□□ 0.32
TRIM25-207ENST00000573108 DDX54Q8TDD1 881 aaKnown RBP17.04■□□□□ 0.32
TRIM25-207ENST00000573108 PUS7Q96PZ0 661 aaKnown RBP17.04■□□□□ 0.32
TRIM25-207ENST00000573108 TESK2Q96S53 571 aa17.03■□□□□ 0.32
TRIM25-207ENST00000573108 DOT1LQ8TEK3 1739 aa17.02■□□□□ 0.32
TRIM25-207ENST00000573108 SHANK3Q9BYB0 1731 aa17.02■□□□□ 0.32
TRIM25-207ENST00000573108 ST20-MTHFSA0A0A6YYL1 179 aa17.02■□□□□ 0.32
TRIM25-207ENST00000573108 MAP3K19Q56UN5 1328 aa17.01■□□□□ 0.31
TRIM25-207ENST00000573108 ARXQ96QS3 562 aa17.01■□□□□ 0.31
TRIM25-207ENST00000573108 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
TRIM25-207ENST00000573108 HOXC9P31274 260 aa17■□□□□ 0.31
TRIM25-207ENST00000573108 QSER1Q2KHR3 1735 aa17■□□□□ 0.31
TRIM25-207ENST00000573108 AKT1S1Q96B36 256 aa17■□□□□ 0.31
TRIM25-207ENST00000573108 COG3Q96JB2 828 aa17■□□□□ 0.31
TRIM25-207ENST00000573108 KCNQ4P56696 695 aa16.99■□□□□ 0.31
TRIM25-207ENST00000573108 MEGF6O75095 1541 aa16.99■□□□□ 0.31
TRIM25-207ENST00000573108 AMPHP49418 695 aa16.98■□□□□ 0.31
TRIM25-207ENST00000573108 SYTL4Q96C24 671 aaPredicted RBP16.98■□□□□ 0.31
TRIM25-207ENST00000573108 LY75O60449 1722 aa16.98■□□□□ 0.31
TRIM25-207ENST00000573108 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms