RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 CCER2I3L3R5 266 aa13.16□□□□□ -0.3
TOM1L1-210ENST00000572158 LTN1O94822 1766 aa13.16□□□□□ -0.3
TOM1L1-210ENST00000572158 FBXO41Q8TF61 875 aa13.15□□□□□ -0.3
TOM1L1-210ENST00000572158 INSRP06213 1382 aa13.15□□□□□ -0.3
TOM1L1-210ENST00000572158 JCADQ9P266 1359 aa13.15□□□□□ -0.3
TOM1L1-210ENST00000572158 COL18A1P39060 1754 aa13.15□□□□□ -0.3
TOM1L1-210ENST00000572158 PPM1GO15355 546 aaPredicted RBP13.14□□□□□ -0.31
TOM1L1-210ENST00000572158 HSP90AB2PQ58FF8 381 aa13.14□□□□□ -0.31
TOM1L1-210ENST00000572158 AXIN2Q9Y2T1 843 aa13.14□□□□□ -0.31
TOM1L1-210ENST00000572158 CPDO75976 1380 aa13.14□□□□□ -0.31
TOM1L1-210ENST00000572158 KIAA0232Q92628 1395 aa13.14□□□□□ -0.31
TOM1L1-210ENST00000572158 HOXC9P31274 260 aa13.13□□□□□ -0.31
TOM1L1-210ENST00000572158 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
TOM1L1-210ENST00000572158 FAM83GA6ND36 823 aa13.13□□□□□ -0.31
TOM1L1-210ENST00000572158 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
TOM1L1-210ENST00000572158 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
TOM1L1-210ENST00000572158 PNISRQ8TF01 805 aaKnown RBP13.12□□□□□ -0.31
TOM1L1-210ENST00000572158 IP6K1Q92551 441 aa13.12□□□□□ -0.31
TOM1L1-210ENST00000572158 FLT4P35916 1363 aa13.12□□□□□ -0.31
TOM1L1-210ENST00000572158 LRP6O75581 1613 aa13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 RGPD5Q99666 1765 aa13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 LMO7Q8WWI1 1683 aa13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 AMPHP49418 695 aa13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
TOM1L1-210ENST00000572158 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
TOM1L1-210ENST00000572158 IL13P35225 146 aa13.1□□□□□ -0.31
TOM1L1-210ENST00000572158 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
TOM1L1-210ENST00000572158 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
TOM1L1-210ENST00000572158 HAP1P54257 671 aaPredicted RBP13.09□□□□□ -0.31
TOM1L1-210ENST00000572158 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
TOM1L1-210ENST00000572158 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
TOM1L1-210ENST00000572158 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
TOM1L1-210ENST00000572158 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
TOM1L1-210ENST00000572158 CFAP53Q96M91 514 aa13.08□□□□□ -0.32
TOM1L1-210ENST00000572158 ABCC6O95255 1503 aa13.07□□□□□ -0.32
TOM1L1-210ENST00000572158 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
TOM1L1-210ENST00000572158 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
TOM1L1-210ENST00000572158 COL14A1Q05707 1796 aaKnown RBP13.06□□□□□ -0.32
TOM1L1-210ENST00000572158 CAPN15O75808 1086 aa13.06□□□□□ -0.32
TOM1L1-210ENST00000572158 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
TOM1L1-210ENST00000572158 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
TOM1L1-210ENST00000572158 ANKRD24Q8TF21 1146 aa13.05□□□□□ -0.32
TOM1L1-210ENST00000572158 EYA1Q99502 592 aa13.05□□□□□ -0.32
TOM1L1-210ENST00000572158 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
TOM1L1-210ENST00000572158 RGPD2P0DJD1 1756 aa13.05□□□□□ -0.32
TOM1L1-210ENST00000572158 ERBB3P21860 1342 aa13.05□□□□□ -0.32
TOM1L1-210ENST00000572158 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
TOM1L1-210ENST00000572158 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
TOM1L1-210ENST00000572158 NBPF6Q5VWK0 638 aa13.04□□□□□ -0.32
TOM1L1-210ENST00000572158 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
TOM1L1-210ENST00000572158 NBPF4Q96M43 638 aa13.04□□□□□ -0.32
TOM1L1-210ENST00000572158 BTG4Q9NY30 223 aa13.04□□□□□ -0.32
TOM1L1-210ENST00000572158 SLIT2O94813 1529 aa13.04□□□□□ -0.32
TOM1L1-210ENST00000572158 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
TOM1L1-210ENST00000572158 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
TOM1L1-210ENST00000572158 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
TOM1L1-210ENST00000572158 IGSF1Q8N6C5 1336 aa13.03□□□□□ -0.32
TOM1L1-210ENST00000572158 NRAPQ86VF7 1730 aa13.02□□□□□ -0.33
TOM1L1-210ENST00000572158 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
TOM1L1-210ENST00000572158 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
TOM1L1-210ENST00000572158 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
TOM1L1-210ENST00000572158 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.33
TOM1L1-210ENST00000572158 C8orf37Q96NL8 207 aa13.02□□□□□ -0.33
TOM1L1-210ENST00000572158 NCAPD2Q15021 1401 aa13.02□□□□□ -0.33
TOM1L1-210ENST00000572158 BCL9LQ86UU0 1499 aa13.02□□□□□ -0.33
TOM1L1-210ENST00000572158 HMOX1P09601 288 aa13.01□□□□□ -0.33
TOM1L1-210ENST00000572158 FNBP4Q8N3X1 1017 aaPredicted RBP13.01□□□□□ -0.33
TOM1L1-210ENST00000572158 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
TOM1L1-210ENST00000572158 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
TOM1L1-210ENST00000572158 NWD2Q9ULI1 1742 aa13□□□□□ -0.33
TOM1L1-210ENST00000572158 FAM208AQ9UK61 1670 aaKnown RBP13□□□□□ -0.33
TOM1L1-210ENST00000572158 KDRP35968 1356 aa13□□□□□ -0.33
TOM1L1-210ENST00000572158 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
TOM1L1-210ENST00000572158 NGLY1Q96IV0 654 aa13□□□□□ -0.33
TOM1L1-210ENST00000572158 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
TOM1L1-210ENST00000572158 RSPH6AQ9H0K4 717 aa13□□□□□ -0.33
TOM1L1-210ENST00000572158 STRN4Q9NRL3 753 aa13□□□□□ -0.33
TOM1L1-210ENST00000572158 SULT6B1Q6IMI4 303 aa12.99□□□□□ -0.33
TOM1L1-210ENST00000572158 POTEHQ6S545 545 aa12.99□□□□□ -0.33
TOM1L1-210ENST00000572158 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
TOM1L1-210ENST00000572158 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
TOM1L1-210ENST00000572158 FCHSD2O94868 740 aa12.98□□□□□ -0.33
TOM1L1-210ENST00000572158 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
TOM1L1-210ENST00000572158 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
TOM1L1-210ENST00000572158 CCDC146Q8IYE0 955 aa12.98□□□□□ -0.33
TOM1L1-210ENST00000572158 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
TOM1L1-210ENST00000572158 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
TOM1L1-210ENST00000572158 EVA1CP58658 441 aa12.98□□□□□ -0.33
TOM1L1-210ENST00000572158 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
TOM1L1-210ENST00000572158 CRB1P82279 1406 aa12.97□□□□□ -0.33
TOM1L1-210ENST00000572158 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
TOM1L1-210ENST00000572158 MEX3CQ5U5Q3 659 aaKnown RBP12.97□□□□□ -0.33
TOM1L1-210ENST00000572158 TOM1L2Q6ZVM7 507 aa12.97□□□□□ -0.33
TOM1L1-210ENST00000572158 UNC5CLQ8IV45 518 aa12.97□□□□□ -0.33
TOM1L1-210ENST00000572158 CARD10Q9BWT7 1032 aa12.97□□□□□ -0.33
TOM1L1-210ENST00000572158 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms