RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 TIMP2P16035 220 aa7.74□□□□□ -1.17
CDC27-213ENST00000571643 SCARF1Q14162 830 aa7.74□□□□□ -1.17
CDC27-213ENST00000571643 NBPF20Q3BBV1 942 aa7.74□□□□□ -1.17
CDC27-213ENST00000571643 ZNF592Q92610 1267 aa7.74□□□□□ -1.17
CDC27-213ENST00000571643 NXF1Q9UBU9 619 aaKnown RBP7.74□□□□□ -1.17
CDC27-213ENST00000571643 EMILIN1Q9Y6C2 1016 aa7.74□□□□□ -1.17
CDC27-213ENST00000571643 GRM5P41594 1212 aa7.73□□□□□ -1.17
CDC27-213ENST00000571643 DHX9Q08211 1270 aaKnown RBP7.73□□□□□ -1.17
CDC27-213ENST00000571643 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
CDC27-213ENST00000571643 BMP1P13497 986 aa7.72□□□□□ -1.17
CDC27-213ENST00000571643 CCDC116Q8IYX3 515 aa7.72□□□□□ -1.17
CDC27-213ENST00000571643 SLC16A10Q8TF71 515 aa7.72□□□□□ -1.17
CDC27-213ENST00000571643 H3BM21 787 aa7.71□□□□□ -1.18
CDC27-213ENST00000571643 UPP2O95045 317 aa7.71□□□□□ -1.18
CDC27-213ENST00000571643 MRPL14Q6P1L8 145 aaKnown RBP7.71□□□□□ -1.18
CDC27-213ENST00000571643 KLF16Q9BXK1 252 aaPredicted RBP7.71□□□□□ -1.18
CDC27-213ENST00000571643 TRIM34Q9BYJ4 488 aa7.71□□□□□ -1.18
CDC27-213ENST00000571643 PGPEP1Q9NXJ5 209 aa7.71□□□□□ -1.18
CDC27-213ENST00000571643 NR3C2P08235 984 aa7.7□□□□□ -1.18
CDC27-213ENST00000571643 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
CDC27-213ENST00000571643 ADAM32Q8TC27 787 aa7.7□□□□□ -1.18
CDC27-213ENST00000571643 EPS8L1Q8TE68 723 aa7.7□□□□□ -1.18
CDC27-213ENST00000571643 IRF7Q92985 503 aa7.7□□□□□ -1.18
CDC27-213ENST00000571643 KCTD15Q96SI1 283 aaPredicted RBP7.7□□□□□ -1.18
CDC27-213ENST00000571643 ZNF330Q9Y3S2 320 aaPredicted RBP7.7□□□□□ -1.18
CDC27-213ENST00000571643 DZIP3Q86Y13 1208 aaKnown RBP7.69□□□□□ -1.18
CDC27-213ENST00000571643 ITPKCQ96DU7 683 aa7.69□□□□□ -1.18
CDC27-213ENST00000571643 GJD4Q96KN9 370 aaPredicted RBP7.69□□□□□ -1.18
CDC27-213ENST00000571643 PRM3Q9NNZ6 103 aa7.69□□□□□ -1.18
CDC27-213ENST00000571643 NDUFB9Q9Y6M9 179 aa7.69□□□□□ -1.18
CDC27-213ENST00000571643 ZBBXA8MT70 800 aa7.68□□□□□ -1.18
CDC27-213ENST00000571643 VSIG8P0DPA2 414 aa7.68□□□□□ -1.18
CDC27-213ENST00000571643 MCCD1P59942 119 aaPredicted RBP7.68□□□□□ -1.18
CDC27-213ENST00000571643 CCDC125Q86Z20 511 aa7.68□□□□□ -1.18
CDC27-213ENST00000571643 MEIOBQ8N635 442 aa7.68□□□□□ -1.18
CDC27-213ENST00000571643 SEPT12Q8IYM1 358 aa7.67□□□□□ -1.18
CDC27-213ENST00000571643 ZFP42Q96MM3 310 aa7.67□□□□□ -1.18
CDC27-213ENST00000571643 OCSTAMPQ9BR26 566 aa7.67□□□□□ -1.18
CDC27-213ENST00000571643 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
CDC27-213ENST00000571643 FAM181BA6NEQ2 426 aa7.66□□□□□ -1.18
CDC27-213ENST00000571643 GMPRP36959 345 aa7.66□□□□□ -1.18
CDC27-213ENST00000571643 INTS6LQ5JSJ4 861 aaKnown RBP7.66□□□□□ -1.18
CDC27-213ENST00000571643 PPP1R26Q5T8A7 1209 aaPredicted RBP7.66□□□□□ -1.18
CDC27-213ENST00000571643 LINC00528Q8N1L1 170 aa7.66□□□□□ -1.18
CDC27-213ENST00000571643 TSEN34Q9BSV6 310 aaKnown RBP7.66□□□□□ -1.18
CDC27-213ENST00000571643 MTMR14Q8NCE2 650 aa7.65□□□□□ -1.18
CDC27-213ENST00000571643 PURBQ96QR8 312 aaKnown RBP7.65□□□□□ -1.18
CDC27-213ENST00000571643 PRKCSHP14314 528 aaPredicted RBP7.64□□□□□ -1.19
CDC27-213ENST00000571643 ERBB4Q15303 1308 aa7.63□□□□□ -1.19
CDC27-213ENST00000571643 BMP2P12643 396 aa7.63□□□□□ -1.19
CDC27-213ENST00000571643 NR1H3Q13133 447 aa7.63□□□□□ -1.19
CDC27-213ENST00000571643 ZSCAN1Q8NBB4 408 aa7.63□□□□□ -1.19
CDC27-213ENST00000571643 ESPNB1AK53 854 aa7.62□□□□□ -1.19
CDC27-213ENST00000571643 FBXO45P0C2W1 286 aa7.62□□□□□ -1.19
CDC27-213ENST00000571643 RNF20Q5VTR2 975 aa7.62□□□□□ -1.19
CDC27-213ENST00000571643 Q6ZVU0 165 aa7.62□□□□□ -1.19
CDC27-213ENST00000571643 PCDHB9Q9Y5E1 797 aa7.62□□□□□ -1.19
CDC27-213ENST00000571643 C6orf118Q5T5N4 469 aa7.61□□□□□ -1.19
CDC27-213ENST00000571643 MAN1A2O60476 641 aa7.6□□□□□ -1.19
CDC27-213ENST00000571643 SNRKQ9NRH2 765 aa7.6□□□□□ -1.19
CDC27-213ENST00000571643 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
CDC27-213ENST00000571643 SPINT1O43278 529 aa7.58□□□□□ -1.2
CDC27-213ENST00000571643 SOS2Q07890 1332 aaPredicted RBP7.57□□□□□ -1.2
CDC27-213ENST00000571643 ADH1AP07327 375 aa7.57□□□□□ -1.2
CDC27-213ENST00000571643 VEGFBP49765 207 aa7.57□□□□□ -1.2
CDC27-213ENST00000571643 RAB15P59190 212 aa7.57□□□□□ -1.2
CDC27-213ENST00000571643 ZNF784Q8NCA9 323 aaPredicted RBP7.57□□□□□ -1.2
CDC27-213ENST00000571643 TTLL8A6PVC2 850 aa7.56□□□□□ -1.2
CDC27-213ENST00000571643 GPR37L1O60883 481 aa7.56□□□□□ -1.2
CDC27-213ENST00000571643 CBLBQ13191 982 aa7.56□□□□□ -1.2
CDC27-213ENST00000571643 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.56□□□□□ -1.2
CDC27-213ENST00000571643 EIF4G2P78344 907 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDC27-213ENST00000571643 TBC1D2BQ9UPU7 963 aa7.55□□□□□ -1.2
CDC27-213ENST00000571643 MCM6Q14566 821 aa7.54□□□□□ -1.2
CDC27-213ENST00000571643 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
CDC27-213ENST00000571643 TMPRSS4Q9NRS4 437 aa7.54□□□□□ -1.2
CDC27-213ENST00000571643 LILRA1O75019 489 aa7.53□□□□□ -1.2
CDC27-213ENST00000571643 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
CDC27-213ENST00000571643 RELBQ01201 579 aa7.53□□□□□ -1.2
CDC27-213ENST00000571643 CC2D2BQ6DHV5 1058 aa7.53□□□□□ -1.2
CDC27-213ENST00000571643 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
CDC27-213ENST00000571643 ESF1Q9H501 851 aaKnown RBP7.53□□□□□ -1.2
CDC27-213ENST00000571643 CYP2U1Q7Z449 544 aa7.52□□□□□ -1.21
CDC27-213ENST00000571643 POLMQ9NP87 494 aaPredicted RBP7.52□□□□□ -1.21
CDC27-213ENST00000571643 CYLDQ9NQC7 956 aa7.52□□□□□ -1.21
CDC27-213ENST00000571643 DNMT3LQ9UJW3 386 aa7.52□□□□□ -1.21
CDC27-213ENST00000571643 SOBPA7XYQ1 873 aa7.51□□□□□ -1.21
CDC27-213ENST00000571643 ATP5J2-PTCD1G3V325 749 aa7.51□□□□□ -1.21
CDC27-213ENST00000571643 SOX11P35716 441 aa7.51□□□□□ -1.21
CDC27-213ENST00000571643 PTGIRP43119 386 aa7.51□□□□□ -1.21
CDC27-213ENST00000571643 ERVK-9P63128 1117 aa7.51□□□□□ -1.21
CDC27-213ENST00000571643 FLIIQ13045 1269 aa7.51□□□□□ -1.21
CDC27-213ENST00000571643 AGBL1Q96MI9 1066 aa7.51□□□□□ -1.21
CDC27-213ENST00000571643 PPFIA3O75145 1194 aa7.5□□□□□ -1.21
CDC27-213ENST00000571643 PCDHB11Q9Y5F2 797 aa7.5□□□□□ -1.21
CDC27-213ENST00000571643 MYCP01106 439 aaPredicted RBP7.49□□□□□ -1.21
CDC27-213ENST00000571643 GPC1P35052 558 aa7.49□□□□□ -1.21
CDC27-213ENST00000571643 ABL2P42684 1182 aa7.49□□□□□ -1.21
CDC27-213ENST00000571643 INSM2Q96T92 566 aaPredicted RBP7.49□□□□□ -1.21
CDC27-213ENST00000571643 GDPD2Q9HCC8 539 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms