RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 ARHGEF25Q86VW2 580 aa17.64■□□□□ 0.41
SCAMP2-212ENST00000569904 PUS7Q96PZ0 661 aaKnown RBP17.64■□□□□ 0.41
SCAMP2-212ENST00000569904 USP31Q70CQ4 1352 aa17.64■□□□□ 0.41
SCAMP2-212ENST00000569904 NUP188Q5SRE5 1749 aa17.64■□□□□ 0.41
SCAMP2-212ENST00000569904 LTN1O94822 1766 aa17.63■□□□□ 0.41
SCAMP2-212ENST00000569904 C11orf95C9JLR9 678 aaPredicted RBP17.62■□□□□ 0.41
SCAMP2-212ENST00000569904 PDE3BQ13370 1112 aa17.62■□□□□ 0.41
SCAMP2-212ENST00000569904 CAMKK2Q96RR4 588 aa17.62■□□□□ 0.41
SCAMP2-212ENST00000569904 AXIN2Q9Y2T1 843 aa17.62■□□□□ 0.41
SCAMP2-212ENST00000569904 WDR17Q8IZU2 1322 aa17.62■□□□□ 0.41
SCAMP2-212ENST00000569904 TRIM37O94972 964 aa17.6■□□□□ 0.41
SCAMP2-212ENST00000569904 OVOS2A0A0G2JMS6 1433 aa17.59■□□□□ 0.41
SCAMP2-212ENST00000569904 OVOS2A0A0J9YW53 1432 aa17.59■□□□□ 0.41
SCAMP2-212ENST00000569904 BCL9O00512 1426 aa17.59■□□□□ 0.41
SCAMP2-212ENST00000569904 OVOS2Q6IE36 1432 aa17.59■□□□□ 0.41
SCAMP2-212ENST00000569904 EDC4Q6P2E9 1401 aaKnown RBP17.59■□□□□ 0.41
SCAMP2-212ENST00000569904 EZH2Q15910 746 aaKnown RBP17.59■□□□□ 0.41
SCAMP2-212ENST00000569904 TRIM26Q12899 539 aaPredicted RBP17.58■□□□□ 0.4
SCAMP2-212ENST00000569904 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
SCAMP2-212ENST00000569904 TESK2Q96S53 571 aa17.57■□□□□ 0.4
SCAMP2-212ENST00000569904 APBA3O96018 575 aa17.56■□□□□ 0.4
SCAMP2-212ENST00000569904 TOM1L2Q6ZVM7 507 aa17.56■□□□□ 0.4
SCAMP2-212ENST00000569904 CDCA7Q9BWT1 371 aaPredicted RBP17.56■□□□□ 0.4
SCAMP2-212ENST00000569904 CARD10Q9BWT7 1032 aa17.56■□□□□ 0.4
SCAMP2-212ENST00000569904 A0A1W2PP64 1363 aa17.55■□□□□ 0.4
SCAMP2-212ENST00000569904 ZBTB7CA1YPR0 619 aa17.55■□□□□ 0.4
SCAMP2-212ENST00000569904 PSDA5PKW4 1024 aaPredicted RBP17.55■□□□□ 0.4
SCAMP2-212ENST00000569904 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
SCAMP2-212ENST00000569904 CCDC7Q96M83 1385 aa17.54■□□□□ 0.4
SCAMP2-212ENST00000569904 DDB1Q16531 1140 aa17.54■□□□□ 0.4
SCAMP2-212ENST00000569904 HDGFL2Q7Z4V5 671 aaPredicted RBP17.54■□□□□ 0.4
SCAMP2-212ENST00000569904 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
SCAMP2-212ENST00000569904 FAM208AQ9UK61 1670 aaKnown RBP17.54■□□□□ 0.4
SCAMP2-212ENST00000569904 NME9Q86XW9 330 aa17.52■□□□□ 0.4
SCAMP2-212ENST00000569904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.52■□□□□ 0.4
SCAMP2-212ENST00000569904 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.4
SCAMP2-212ENST00000569904 ERBB3P21860 1342 aa17.51■□□□□ 0.39
SCAMP2-212ENST00000569904 ST20-MTHFSA0A0A6YYL1 179 aa17.51■□□□□ 0.39
SCAMP2-212ENST00000569904 R3HDM1Q15032 1099 aaKnown RBP17.51■□□□□ 0.39
SCAMP2-212ENST00000569904 TNS2Q63HR2 1409 aa17.51■□□□□ 0.39
SCAMP2-212ENST00000569904 TMC1Q8TDI8 760 aa17.51■□□□□ 0.39
SCAMP2-212ENST00000569904 PLSCR1O15162 318 aa17.5■□□□□ 0.39
SCAMP2-212ENST00000569904 SOX12O15370 315 aa17.5■□□□□ 0.39
SCAMP2-212ENST00000569904 NHSQ6T4R5 1651 aa17.49■□□□□ 0.39
SCAMP2-212ENST00000569904 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
SCAMP2-212ENST00000569904 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
SCAMP2-212ENST00000569904 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
SCAMP2-212ENST00000569904 ANKRD36BQ8N2N9 1353 aa17.47■□□□□ 0.39
SCAMP2-212ENST00000569904 CASZ1Q86V15 1759 aa17.45■□□□□ 0.38
SCAMP2-212ENST00000569904 USP47Q96K76 1375 aa17.45■□□□□ 0.38
SCAMP2-212ENST00000569904 EXOC5O00471 708 aa17.45■□□□□ 0.38
SCAMP2-212ENST00000569904 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
SCAMP2-212ENST00000569904 MYOM1P52179 1685 aa17.45■□□□□ 0.38
SCAMP2-212ENST00000569904 KIF20BQ96Q89 1820 aa17.44■□□□□ 0.38
SCAMP2-212ENST00000569904 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
SCAMP2-212ENST00000569904 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
SCAMP2-212ENST00000569904 CLSPNQ9HAW4 1339 aa17.43■□□□□ 0.38
SCAMP2-212ENST00000569904 PTF1AQ7RTS3 328 aa17.42■□□□□ 0.38
SCAMP2-212ENST00000569904 IP6K1Q92551 441 aa17.42■□□□□ 0.38
SCAMP2-212ENST00000569904 SHANK3Q9BYB0 1731 aa17.41■□□□□ 0.38
SCAMP2-212ENST00000569904 RGPD2P0DJD1 1756 aa17.41■□□□□ 0.38
SCAMP2-212ENST00000569904 TMF1P82094 1093 aa17.41■□□□□ 0.38
SCAMP2-212ENST00000569904 BTAF1O14981 1849 aa17.41■□□□□ 0.38
SCAMP2-212ENST00000569904 IL2RBP14784 551 aa17.4■□□□□ 0.38
SCAMP2-212ENST00000569904 PROM2Q8N271 834 aa17.4■□□□□ 0.38
SCAMP2-212ENST00000569904 COG3Q96JB2 828 aa17.39■□□□□ 0.37
SCAMP2-212ENST00000569904 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
SCAMP2-212ENST00000569904 PAPPAQ13219 1627 aa17.39■□□□□ 0.37
SCAMP2-212ENST00000569904 RTL1A6NKG5 1358 aa17.39■□□□□ 0.37
SCAMP2-212ENST00000569904 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
SCAMP2-212ENST00000569904 ANO8Q9HCE9 1232 aaPredicted RBP17.37■□□□□ 0.37
SCAMP2-212ENST00000569904 FYB1O15117 783 aa17.36■□□□□ 0.37
SCAMP2-212ENST00000569904 HOXC9P31274 260 aa17.36■□□□□ 0.37
SCAMP2-212ENST00000569904 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
SCAMP2-212ENST00000569904 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
SCAMP2-212ENST00000569904 KCNQ2O43526 872 aa17.34■□□□□ 0.37
SCAMP2-212ENST00000569904 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
SCAMP2-212ENST00000569904 QSER1Q2KHR3 1735 aa17.34■□□□□ 0.37
SCAMP2-212ENST00000569904 DOT1LQ8TEK3 1739 aa17.34■□□□□ 0.37
SCAMP2-212ENST00000569904 KIF24Q5T7B8 1368 aa17.33■□□□□ 0.36
SCAMP2-212ENST00000569904 SPON1Q9HCB6 807 aa17.33■□□□□ 0.36
SCAMP2-212ENST00000569904 LY75O60449 1722 aa17.32■□□□□ 0.36
SCAMP2-212ENST00000569904 FBLN1P23142 703 aa17.31■□□□□ 0.36
SCAMP2-212ENST00000569904 MEGF6O75095 1541 aa17.31■□□□□ 0.36
SCAMP2-212ENST00000569904 KAT6BQ8WYB5 2073 aa17.3■□□□□ 0.36
SCAMP2-212ENST00000569904 AMPHP49418 695 aa17.3■□□□□ 0.36
SCAMP2-212ENST00000569904 GGNBP2Q9H3C7 697 aa17.3■□□□□ 0.36
SCAMP2-212ENST00000569904 INSRP06213 1382 aa17.29■□□□□ 0.36
SCAMP2-212ENST00000569904 SLC15A2Q16348 729 aa17.29■□□□□ 0.36
SCAMP2-212ENST00000569904 ACSBG1Q96GR2 724 aa17.29■□□□□ 0.36
SCAMP2-212ENST00000569904 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
SCAMP2-212ENST00000569904 COL24A1Q17RW2 1714 aa17.29■□□□□ 0.36
SCAMP2-212ENST00000569904 RRS1Q15050 365 aaKnown RBP17.28■□□□□ 0.36
SCAMP2-212ENST00000569904 LTV1Q96GA3 475 aaPredicted RBP17.28■□□□□ 0.36
SCAMP2-212ENST00000569904 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
SCAMP2-212ENST00000569904 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
SCAMP2-212ENST00000569904 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
SCAMP2-212ENST00000569904 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.36
SCAMP2-212ENST00000569904 STK32BQ9NY57 414 aa17.27■□□□□ 0.36
SCAMP2-212ENST00000569904 NCAPD2Q15021 1401 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms