RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 SOX12O15370 315 aa23.25■■□□□ 1.31
EDC3-216ENST00000569561 TCP11L2Q8N4U5 519 aa23.25■■□□□ 1.31
EDC3-216ENST00000569561 ZBTB7CA1YPR0 619 aa23.24■■□□□ 1.31
EDC3-216ENST00000569561 HSPA5P11021 654 aaKnown RBP23.24■■□□□ 1.31
EDC3-216ENST00000569561 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
EDC3-216ENST00000569561 THRAP3Q9Y2W1 955 aaKnown RBP23.24■■□□□ 1.31
EDC3-216ENST00000569561 WDR17Q8IZU2 1322 aa23.23■■□□□ 1.31
EDC3-216ENST00000569561 BLMP54132 1417 aaPredicted RBP23.23■■□□□ 1.31
EDC3-216ENST00000569561 CCDC125Q86Z20 511 aa23.22■■□□□ 1.31
EDC3-216ENST00000569561 USP35Q9P2H5 1018 aa23.22■■□□□ 1.31
EDC3-216ENST00000569561 A0A0G2JS52 829 aa23.21■■□□□ 1.31
EDC3-216ENST00000569561 MYT1Q01538 1121 aa23.21■■□□□ 1.31
EDC3-216ENST00000569561 CARD14Q9BXL6 1004 aa23.2■■□□□ 1.3
EDC3-216ENST00000569561 FYB1O15117 783 aa23.19■■□□□ 1.3
EDC3-216ENST00000569561 RGPD5Q99666 1765 aa23.17■■□□□ 1.3
EDC3-216ENST00000569561 PARP4Q9UKK3 1724 aaKnown RBP23.17■■□□□ 1.3
EDC3-216ENST00000569561 ERBB3P21860 1342 aa23.17■■□□□ 1.3
EDC3-216ENST00000569561 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
EDC3-216ENST00000569561 COG3Q96JB2 828 aa23.16■■□□□ 1.3
EDC3-216ENST00000569561 CARD10Q9BWT7 1032 aa23.16■■□□□ 1.3
EDC3-216ENST00000569561 LTN1O94822 1766 aa23.16■■□□□ 1.3
EDC3-216ENST00000569561 NSD3Q9BZ95 1437 aa23.16■■□□□ 1.3
EDC3-216ENST00000569561 FAM182BQ5T319 152 aa23.15■■□□□ 1.3
EDC3-216ENST00000569561 TOM1L2Q6ZVM7 507 aa23.15■■□□□ 1.3
EDC3-216ENST00000569561 MAP3K19Q56UN5 1328 aa23.13■■□□□ 1.29
EDC3-216ENST00000569561 LRRC37A3O60309 1634 aa23.13■■□□□ 1.29
EDC3-216ENST00000569561 C11orf95C9JLR9 678 aaPredicted RBP23.13■■□□□ 1.29
EDC3-216ENST00000569561 GGNBP2Q9H3C7 697 aa23.13■■□□□ 1.29
EDC3-216ENST00000569561 WNK3Q9BYP7 1800 aa23.12■■□□□ 1.29
EDC3-216ENST00000569561 FBLN1P23142 703 aa23.12■■□□□ 1.29
EDC3-216ENST00000569561 IP6K1Q92551 441 aa23.12■■□□□ 1.29
EDC3-216ENST00000569561 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
EDC3-216ENST00000569561 KIF20BQ96Q89 1820 aa23.1■■□□□ 1.29
EDC3-216ENST00000569561 PEAK1Q9H792 1746 aa23.09■■□□□ 1.29
EDC3-216ENST00000569561 CSB-PGBD3P0DP91 1061 aa23.09■■□□□ 1.29
EDC3-216ENST00000569561 DEFB132Q7Z7B7 95 aa23.09■■□□□ 1.29
EDC3-216ENST00000569561 ANKRD24Q8TF21 1146 aa23.09■■□□□ 1.29
EDC3-216ENST00000569561 FAM196AQ6ZSG2 479 aa23.08■■□□□ 1.29
EDC3-216ENST00000569561 RTL1A6NKG5 1358 aa23.08■■□□□ 1.29
EDC3-216ENST00000569561 TNS1Q9HBL0 1735 aaKnown RBP23.08■■□□□ 1.28
EDC3-216ENST00000569561 HOXC9P31274 260 aa23.07■■□□□ 1.28
EDC3-216ENST00000569561 PDE3BQ13370 1112 aa23.07■■□□□ 1.28
EDC3-216ENST00000569561 CDCA7Q9BWT1 371 aaPredicted RBP23.07■■□□□ 1.28
EDC3-216ENST00000569561 RGPD1P0DJD0 1748 aa23.06■■□□□ 1.28
EDC3-216ENST00000569561 RRS1Q15050 365 aaKnown RBP23.05■■□□□ 1.28
EDC3-216ENST00000569561 DDB1Q16531 1140 aa23.04■■□□□ 1.28
EDC3-216ENST00000569561 BCL9O00512 1426 aa23.04■■□□□ 1.28
EDC3-216ENST00000569561 OVOS2A0A0G2JMS6 1433 aa23.03■■□□□ 1.28
EDC3-216ENST00000569561 TNS2Q63HR2 1409 aa23.03■■□□□ 1.28
EDC3-216ENST00000569561 SF3B2Q13435 895 aaKnown RBP23.03■■□□□ 1.28
EDC3-216ENST00000569561 POLR3GLQ9BT43 218 aa23.03■■□□□ 1.28
EDC3-216ENST00000569561 NLRP2Q9NX02 1062 aa23.02■■□□□ 1.28
EDC3-216ENST00000569561 CGNL1Q0VF96 1302 aa23.02■■□□□ 1.28
EDC3-216ENST00000569561 KIF24Q5T7B8 1368 aa23.01■■□□□ 1.27
EDC3-216ENST00000569561 FAM208AQ9UK61 1670 aaKnown RBP23.01■■□□□ 1.27
EDC3-216ENST00000569561 TRIM37O94972 964 aa23.01■■□□□ 1.27
EDC3-216ENST00000569561 AMPHP49418 695 aa23.01■■□□□ 1.27
EDC3-216ENST00000569561 MARCH10Q8NA82 808 aaPredicted RBP23.01■■□□□ 1.27
EDC3-216ENST00000569561 PANK3Q9H999 370 aa23.01■■□□□ 1.27
EDC3-216ENST00000569561 KIF7Q2M1P5 1343 aa23.01■■□□□ 1.27
EDC3-216ENST00000569561 BAG6P46379 1132 aa23■■□□□ 1.27
EDC3-216ENST00000569561 ANKRD26Q9UPS8 1709 aa22.98■■□□□ 1.27
EDC3-216ENST00000569561 INSRP06213 1382 aa22.98■■□□□ 1.27
EDC3-216ENST00000569561 FLT4P35916 1363 aa22.98■■□□□ 1.27
EDC3-216ENST00000569561 IL2RBP14784 551 aa22.97■■□□□ 1.27
EDC3-216ENST00000569561 EN1Q05925 392 aaPredicted RBP22.97■■□□□ 1.27
EDC3-216ENST00000569561 LTV1Q96GA3 475 aaPredicted RBP22.97■■□□□ 1.27
EDC3-216ENST00000569561 CAMKK2Q96RR4 588 aa22.96■■□□□ 1.27
EDC3-216ENST00000569561 EMILIN1Q9Y6C2 1016 aa22.96■■□□□ 1.27
EDC3-216ENST00000569561 EXOC5O00471 708 aa22.95■■□□□ 1.26
EDC3-216ENST00000569561 HSP90AB2PQ58FF8 381 aa22.94■■□□□ 1.26
EDC3-216ENST00000569561 NSD2O96028 1365 aa22.93■■□□□ 1.26
EDC3-216ENST00000569561 PARD3Q8TEW0 1356 aa22.92■■□□□ 1.26
EDC3-216ENST00000569561 EZH2Q15910 746 aaKnown RBP22.92■■□□□ 1.26
EDC3-216ENST00000569561 NBPF6Q5VWK0 638 aa22.92■■□□□ 1.26
EDC3-216ENST00000569561 NBPF4Q96M43 638 aa22.92■■□□□ 1.26
EDC3-216ENST00000569561 MEGF6O75095 1541 aa22.92■■□□□ 1.26
EDC3-216ENST00000569561 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
EDC3-216ENST00000569561 NCAPD2Q15021 1401 aa22.91■■□□□ 1.26
EDC3-216ENST00000569561 APBA3O96018 575 aa22.91■■□□□ 1.26
EDC3-216ENST00000569561 PTF1AQ7RTS3 328 aa22.91■■□□□ 1.26
EDC3-216ENST00000569561 POLKQ9UBT6 870 aa22.91■■□□□ 1.26
EDC3-216ENST00000569561 RGPD2P0DJD1 1756 aa22.91■■□□□ 1.26
EDC3-216ENST00000569561 SMG6Q86US8 1419 aaKnown RBP22.9■■□□□ 1.26
EDC3-216ENST00000569561 WASHC2AQ641Q2 1341 aa22.89■■□□□ 1.26
EDC3-216ENST00000569561 RREB1Q92766 1687 aa22.88■■□□□ 1.25
EDC3-216ENST00000569561 AMER1Q5JTC6 1135 aaPredicted RBP22.88■■□□□ 1.25
EDC3-216ENST00000569561 BCL11BQ9C0K0 894 aaPredicted RBP22.88■■□□□ 1.25
EDC3-216ENST00000569561 PER1O15534 1290 aaPredicted RBP22.87■■□□□ 1.25
EDC3-216ENST00000569561 RGPD3A6NKT7 1758 aaPredicted RBP22.86■■□□□ 1.25
EDC3-216ENST00000569561 RGPD4Q7Z3J3 1758 aa22.86■■□□□ 1.25
EDC3-216ENST00000569561 SHANK3Q9BYB0 1731 aa22.85■■□□□ 1.25
EDC3-216ENST00000569561 USHBP1Q8N6Y0 703 aa22.85■■□□□ 1.25
EDC3-216ENST00000569561 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
EDC3-216ENST00000569561 PLSCR1O15162 318 aa22.84■■□□□ 1.25
EDC3-216ENST00000569561 KNSTRNQ9Y448 316 aa22.84■■□□□ 1.25
EDC3-216ENST00000569561 NUP188Q5SRE5 1749 aa22.83■■□□□ 1.25
EDC3-216ENST00000569561 MAP2P11137 1827 aaKnown RBP22.83■■□□□ 1.25
EDC3-216ENST00000569561 KCNQ2O43526 872 aa22.82■■□□□ 1.24
EDC3-216ENST00000569561 TNNT2P45379 298 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms