RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
TCF4-243ENST00000569357 THRAP3Q9Y2W1 955 aaKnown RBP13.54□□□□□ -0.24
TCF4-243ENST00000569357 WASLO00401 505 aaPredicted RBP13.53□□□□□ -0.24
TCF4-243ENST00000569357 MTFR1LQ9H019 292 aa13.53□□□□□ -0.24
TCF4-243ENST00000569357 OVOS2A0A0G2JMS6 1433 aa13.53□□□□□ -0.24
TCF4-243ENST00000569357 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
TCF4-243ENST00000569357 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
TCF4-243ENST00000569357 SLC15A2Q16348 729 aa13.52□□□□□ -0.25
TCF4-243ENST00000569357 DDB1Q16531 1140 aa13.52□□□□□ -0.25
TCF4-243ENST00000569357 PROM2Q8N271 834 aa13.52□□□□□ -0.25
TCF4-243ENST00000569357 CRYBG1Q9Y4K1 1723 aa13.52□□□□□ -0.25
TCF4-243ENST00000569357 CASZ1Q86V15 1759 aa13.52□□□□□ -0.25
TCF4-243ENST00000569357 TXNRD1Q16881 649 aa13.51□□□□□ -0.25
TCF4-243ENST00000569357 ABTB2Q8N961 1025 aa13.51□□□□□ -0.25
TCF4-243ENST00000569357 ARXQ96QS3 562 aa13.51□□□□□ -0.25
TCF4-243ENST00000569357 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
TCF4-243ENST00000569357 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
TCF4-243ENST00000569357 CHD4Q14839 1912 aa13.49□□□□□ -0.25
TCF4-243ENST00000569357 NUDT16Q96DE0 195 aaKnown RBP13.49□□□□□ -0.25
TCF4-243ENST00000569357 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
TCF4-243ENST00000569357 PHRF1Q9P1Y6 1649 aaKnown RBP13.48□□□□□ -0.25
TCF4-243ENST00000569357 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
TCF4-243ENST00000569357 MPHOSPH9Q99550 1183 aa13.47□□□□□ -0.25
TCF4-243ENST00000569357 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
TCF4-243ENST00000569357 ATP7BP35670 1465 aa13.46□□□□□ -0.25
TCF4-243ENST00000569357 CRB1P82279 1406 aa13.46□□□□□ -0.26
TCF4-243ENST00000569357 ACEP12821 1306 aa13.45□□□□□ -0.26
TCF4-243ENST00000569357 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
TCF4-243ENST00000569357 CPDO75976 1380 aa13.45□□□□□ -0.26
TCF4-243ENST00000569357 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
TCF4-243ENST00000569357 COL5A2P05997 1499 aaPredicted RBP13.44□□□□□ -0.26
TCF4-243ENST00000569357 ZBTB22O15209 634 aa13.44□□□□□ -0.26
TCF4-243ENST00000569357 GCP02774 474 aa13.44□□□□□ -0.26
TCF4-243ENST00000569357 NLRP13Q86W25 1043 aa13.44□□□□□ -0.26
TCF4-243ENST00000569357 RGPD3A6NKT7 1758 aaPredicted RBP13.43□□□□□ -0.26
TCF4-243ENST00000569357 RGPD4Q7Z3J3 1758 aa13.43□□□□□ -0.26
TCF4-243ENST00000569357 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
TCF4-243ENST00000569357 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
TCF4-243ENST00000569357 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
TCF4-243ENST00000569357 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
TCF4-243ENST00000569357 CDK19Q9BWU1 502 aa13.42□□□□□ -0.26
TCF4-243ENST00000569357 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
TCF4-243ENST00000569357 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
TCF4-243ENST00000569357 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
TCF4-243ENST00000569357 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
TCF4-243ENST00000569357 USP19O94966 1318 aa13.4□□□□□ -0.26
TCF4-243ENST00000569357 LRRC37A3O60309 1634 aa13.4□□□□□ -0.26
TCF4-243ENST00000569357 C19orf67A6NJJ6 358 aa13.4□□□□□ -0.26
TCF4-243ENST00000569357 POLD1P28340 1107 aa13.4□□□□□ -0.26
TCF4-243ENST00000569357 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
TCF4-243ENST00000569357 SBF2Q86WG5 1849 aa13.4□□□□□ -0.26
TCF4-243ENST00000569357 UTRNP46939 3433 aa13.4□□□□□ -0.26
TCF4-243ENST00000569357 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
TCF4-243ENST00000569357 ACSBG1Q96GR2 724 aa13.39□□□□□ -0.27
TCF4-243ENST00000569357 CDCA7Q9BWT1 371 aaPredicted RBP13.39□□□□□ -0.27
TCF4-243ENST00000569357 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
TCF4-243ENST00000569357 POLR3AO14802 1390 aaPredicted RBP13.38□□□□□ -0.27
TCF4-243ENST00000569357 EXOC5O00471 708 aa13.38□□□□□ -0.27
TCF4-243ENST00000569357 HSPA6P17066 643 aa13.38□□□□□ -0.27
TCF4-243ENST00000569357 NLGN2Q8NFZ4 835 aa13.38□□□□□ -0.27
TCF4-243ENST00000569357 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
TCF4-243ENST00000569357 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
TCF4-243ENST00000569357 ITSN1Q15811 1721 aa13.37□□□□□ -0.27
TCF4-243ENST00000569357 NLRP6P59044 892 aa13.37□□□□□ -0.27
TCF4-243ENST00000569357 ZNF827Q17R98 1081 aa13.37□□□□□ -0.27
TCF4-243ENST00000569357 SHANK3Q9BYB0 1731 aa13.36□□□□□ -0.27
TCF4-243ENST00000569357 AATKQ6ZMQ8 1374 aa13.36□□□□□ -0.27
TCF4-243ENST00000569357 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
TCF4-243ENST00000569357 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
TCF4-243ENST00000569357 GABBR2O75899 941 aa13.36□□□□□ -0.27
TCF4-243ENST00000569357 ATP10DQ9P241 1426 aa13.36□□□□□ -0.27
TCF4-243ENST00000569357 WDR17Q8IZU2 1322 aa13.36□□□□□ -0.27
TCF4-243ENST00000569357 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
TCF4-243ENST00000569357 DCAF11Q8TEB1 546 aa13.35□□□□□ -0.27
TCF4-243ENST00000569357 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
TCF4-243ENST00000569357 BCL9O00512 1426 aa13.35□□□□□ -0.27
TCF4-243ENST00000569357 SOX12O15370 315 aa13.34□□□□□ -0.27
TCF4-243ENST00000569357 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
TCF4-243ENST00000569357 LHX8Q68G74 356 aa13.33□□□□□ -0.28
TCF4-243ENST00000569357 SLC16A10Q8TF71 515 aa13.33□□□□□ -0.28
TCF4-243ENST00000569357 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
TCF4-243ENST00000569357 CARD10Q9BWT7 1032 aa13.31□□□□□ -0.28
TCF4-243ENST00000569357 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
TCF4-243ENST00000569357 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
TCF4-243ENST00000569357 BRD4O60885 1362 aaPredicted RBP13.31□□□□□ -0.28
TCF4-243ENST00000569357 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
TCF4-243ENST00000569357 PPIP5K1Q6PFW1 1433 aa13.3□□□□□ -0.28
TCF4-243ENST00000569357 CEP350Q5VT06 3117 aa13.29□□□□□ -0.28
TCF4-243ENST00000569357 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
TCF4-243ENST00000569357 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
TCF4-243ENST00000569357 USP6P35125 1406 aa13.29□□□□□ -0.28
TCF4-243ENST00000569357 KCNQ4P56696 695 aa13.28□□□□□ -0.28
TCF4-243ENST00000569357 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
TCF4-243ENST00000569357 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
TCF4-243ENST00000569357 TOPAZ1Q8N9V7 1692 aa13.28□□□□□ -0.28
TCF4-243ENST00000569357 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.29
TCF4-243ENST00000569357 CCDC7Q96M83 1385 aa13.27□□□□□ -0.29
TCF4-243ENST00000569357 PAPPAQ13219 1627 aa13.26□□□□□ -0.29
TCF4-243ENST00000569357 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
TCF4-243ENST00000569357 CABP1Q9NZU7 370 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms