RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 Q6ZVU0 165 aa8.31□□□□□ -1.08
CFDP1-208ENST00000569341 GPKOWQ92917 476 aaPredicted RBP eCLIP8.31□□□□□ -1.08
CFDP1-208ENST00000569341 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
CFDP1-208ENST00000569341 FIGNL2A6NMB9 653 aa8.3□□□□□ -1.08
CFDP1-208ENST00000569341 TTLL8A6PVC2 850 aa8.3□□□□□ -1.08
CFDP1-208ENST00000569341 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.08
CFDP1-208ENST00000569341 FBXO31Q5XUX0 539 aaPredicted RBP8.3□□□□□ -1.08
CFDP1-208ENST00000569341 SLC24A3Q9HC58 644 aa8.3□□□□□ -1.08
CFDP1-208ENST00000569341 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
CFDP1-208ENST00000569341 SPINT1O43278 529 aa8.29□□□□□ -1.08
CFDP1-208ENST00000569341 CNTNAP3BQ96NU0 1288 aa8.29□□□□□ -1.08
CFDP1-208ENST00000569341 CNTNAP3Q9BZ76 1288 aa8.29□□□□□ -1.08
CFDP1-208ENST00000569341 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
CFDP1-208ENST00000569341 NANOS1Q8WY41 292 aaKnown RBP8.28□□□□□ -1.08
CFDP1-208ENST00000569341 LRRN4Q8WUT4 740 aa8.27□□□□□ -1.09
CFDP1-208ENST00000569341 OCSTAMPQ9BR26 566 aa8.27□□□□□ -1.09
CFDP1-208ENST00000569341 SLC35F4A4IF30 521 aa8.26□□□□□ -1.09
CFDP1-208ENST00000569341 RNFT1Q5M7Z0 435 aa8.26□□□□□ -1.09
CFDP1-208ENST00000569341 KCTD17Q8N5Z5 321 aa8.26□□□□□ -1.09
CFDP1-208ENST00000569341 CCDC155Q8N6L0 562 aa8.26□□□□□ -1.09
CFDP1-208ENST00000569341 KCTD15Q96SI1 283 aaPredicted RBP8.26□□□□□ -1.09
CFDP1-208ENST00000569341 COL25A1Q9BXS0 654 aaPredicted RBP8.26□□□□□ -1.09
CFDP1-208ENST00000569341 ARHGAP9Q9BRR9 750 aa8.25□□□□□ -1.09
CFDP1-208ENST00000569341 RSPH6AQ9H0K4 717 aa8.25□□□□□ -1.09
CFDP1-208ENST00000569341 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
CFDP1-208ENST00000569341 FKBPLQ9UIM3 349 aa8.25□□□□□ -1.09
CFDP1-208ENST00000569341 ADAMTS8Q9UP79 889 aa8.25□□□□□ -1.09
CFDP1-208ENST00000569341 INTS6LQ5JSJ4 861 aaKnown RBP8.24□□□□□ -1.09
CFDP1-208ENST00000569341 AGBL1Q96MI9 1066 aa8.24□□□□□ -1.09
CFDP1-208ENST00000569341 CTSOP43234 321 aaPredicted RBP8.23□□□□□ -1.09
CFDP1-208ENST00000569341 SUZ12Q15022 739 aaKnown RBP8.23□□□□□ -1.09
CFDP1-208ENST00000569341 NR6A1Q15406 480 aa8.23□□□□□ -1.09
CFDP1-208ENST00000569341 ZNF385CQ66K41 422 aaPredicted RBP8.23□□□□□ -1.09
CFDP1-208ENST00000569341 RASSF7Q02833 373 aa8.22□□□□□ -1.09
CFDP1-208ENST00000569341 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
CFDP1-208ENST00000569341 SLC10A4Q96EP9 437 aa8.22□□□□□ -1.09
CFDP1-208ENST00000569341 VWA5B2Q8N398 1253 aa8.21□□□□□ -1.1
CFDP1-208ENST00000569341 INSM2Q96T92 566 aaPredicted RBP8.21□□□□□ -1.1
CFDP1-208ENST00000569341 CDV3Q9UKY7 258 aaKnown RBP8.21□□□□□ -1.1
CFDP1-208ENST00000569341 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
CFDP1-208ENST00000569341 ITGA6P23229 1130 aa8.2□□□□□ -1.1
CFDP1-208ENST00000569341 RELBQ01201 579 aa8.2□□□□□ -1.1
CFDP1-208ENST00000569341 DHX9Q08211 1270 aaKnown RBP8.2□□□□□ -1.1
CFDP1-208ENST00000569341 ZBTB33Q86T24 672 aa8.2□□□□□ -1.1
CFDP1-208ENST00000569341 TMEM151AQ8N4L1 468 aa8.2□□□□□ -1.1
CFDP1-208ENST00000569341 PROCA1Q8NCQ7 364 aaPredicted RBP8.2□□□□□ -1.1
CFDP1-208ENST00000569341 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
CFDP1-208ENST00000569341 ZC3H4Q9UPT8 1303 aaKnown RBP8.2□□□□□ -1.1
CFDP1-208ENST00000569341 NISCHQ9Y2I1 1504 aa8.19□□□□□ -1.1
CFDP1-208ENST00000569341 SENP3-EIF4A1A0A087X0R7 540 aa8.19□□□□□ -1.1
CFDP1-208ENST00000569341 ARHGEF15O94989 841 aa8.19□□□□□ -1.1
CFDP1-208ENST00000569341 GDF11O95390 407 aa8.19□□□□□ -1.1
CFDP1-208ENST00000569341 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
CFDP1-208ENST00000569341 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
CFDP1-208ENST00000569341 KDF1Q8NAX2 398 aaPredicted RBP8.19□□□□□ -1.1
CFDP1-208ENST00000569341 EPS8L1Q8TE68 723 aa8.19□□□□□ -1.1
CFDP1-208ENST00000569341 TMPRSS4Q9NRS4 437 aa8.19□□□□□ -1.1
CFDP1-208ENST00000569341 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
CFDP1-208ENST00000569341 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
CFDP1-208ENST00000569341 RNF217Q8TC41 542 aa8.18□□□□□ -1.1
CFDP1-208ENST00000569341 ZNF395Q9H8N7 513 aaPredicted RBP8.18□□□□□ -1.1
CFDP1-208ENST00000569341 LILRA1O75019 489 aa8.17□□□□□ -1.1
CFDP1-208ENST00000569341 PTK2Q05397 1052 aa8.17□□□□□ -1.1
CFDP1-208ENST00000569341 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
CFDP1-208ENST00000569341 GPSM3Q9Y4H4 160 aa8.17□□□□□ -1.1
CFDP1-208ENST00000569341 CDC14CA4D256 554 aa8.16□□□□□ -1.1
CFDP1-208ENST00000569341 SH3D19Q5HYK7 790 aa8.16□□□□□ -1.1
CFDP1-208ENST00000569341 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-208ENST00000569341 SVOPQ8N4V2 548 aa8.16□□□□□ -1.1
CFDP1-208ENST00000569341 ZNF784Q8NCA9 323 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-208ENST00000569341 POLMQ9NP87 494 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-208ENST00000569341 ADH1AP07327 375 aa8.14□□□□□ -1.11
CFDP1-208ENST00000569341 HMX1Q9NP08 348 aaPredicted RBP8.14□□□□□ -1.11
CFDP1-208ENST00000569341 CUEDC1Q9NWM3 386 aaPredicted RBP8.14□□□□□ -1.11
CFDP1-208ENST00000569341 ESPNB1AK53 854 aa8.13□□□□□ -1.11
CFDP1-208ENST00000569341 RNF225M0QZC1 329 aaPredicted RBP8.13□□□□□ -1.11
CFDP1-208ENST00000569341 ERVH48-1M5A8F1 160 aa8.13□□□□□ -1.11
CFDP1-208ENST00000569341 AP1G2O75843 785 aa8.13□□□□□ -1.11
CFDP1-208ENST00000569341 FAM117AQ9C073 453 aa8.13□□□□□ -1.11
CFDP1-208ENST00000569341 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
CFDP1-208ENST00000569341 PTGIRP43119 386 aa8.12□□□□□ -1.11
CFDP1-208ENST00000569341 RAB15P59190 212 aa8.12□□□□□ -1.11
CFDP1-208ENST00000569341 LYPD4Q6UWN0 246 aa8.12□□□□□ -1.11
CFDP1-208ENST00000569341 ADAMTS2O95450 1211 aa8.11□□□□□ -1.11
CFDP1-208ENST00000569341 GAS6Q14393 721 aa8.11□□□□□ -1.11
CFDP1-208ENST00000569341 NBPF20Q3BBV1 942 aa8.11□□□□□ -1.11
CFDP1-208ENST00000569341 KDM4CQ9H3R0 1056 aa8.11□□□□□ -1.11
CFDP1-208ENST00000569341 IRS1P35568 1242 aa8.1□□□□□ -1.11
CFDP1-208ENST00000569341 LYSMD3Q7Z3D4 306 aa8.09□□□□□ -1.11
CFDP1-208ENST00000569341 DZIP3Q86Y13 1208 aaKnown RBP8.09□□□□□ -1.11
CFDP1-208ENST00000569341 USP17L8P0C7I0 530 aa8.08□□□□□ -1.12
CFDP1-208ENST00000569341 SRSF11Q05519 484 aaKnown RBP8.08□□□□□ -1.12
CFDP1-208ENST00000569341 DNMT3AQ9Y6K1 912 aaPredicted RBP8.08□□□□□ -1.12
CFDP1-208ENST00000569341 CELA2BP08218 269 aaPredicted RBP8.07□□□□□ -1.12
CFDP1-208ENST00000569341 RNF144AP50876 292 aaPredicted RBP8.07□□□□□ -1.12
CFDP1-208ENST00000569341 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
CFDP1-208ENST00000569341 TRIM34Q9BYJ4 488 aa8.07□□□□□ -1.12
CFDP1-208ENST00000569341 RHOQP17081 205 aa8.06□□□□□ -1.12
CFDP1-208ENST00000569341 MARSP56192 900 aaKnown RBP8.06□□□□□ -1.12
CFDP1-208ENST00000569341 PRICKLE2Q7Z3G6 844 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms