RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 THRAP3Q9Y2W1 955 aaKnown RBP25.4■■□□□ 1.66
SIN3A-212ENST00000568919 CDCA8Q53HL2 280 aa25.38■■□□□ 1.65
SIN3A-212ENST00000568919 NFAT5O94916 1531 aa25.37■■□□□ 1.65
SIN3A-212ENST00000568919 SF3B2Q13435 895 aaKnown RBP25.37■■□□□ 1.65
SIN3A-212ENST00000568919 CRB1P82279 1406 aa25.37■■□□□ 1.65
SIN3A-212ENST00000568919 TOM1L2Q6ZVM7 507 aa25.36■■□□□ 1.65
SIN3A-212ENST00000568919 DEFB132Q7Z7B7 95 aa25.35■■□□□ 1.65
SIN3A-212ENST00000568919 WDR17Q8IZU2 1322 aa25.35■■□□□ 1.65
SIN3A-212ENST00000568919 RGPD5Q99666 1765 aa25.34■■□□□ 1.65
SIN3A-212ENST00000568919 USP54Q70EL1 1684 aa25.34■■□□□ 1.65
SIN3A-212ENST00000568919 ANKRD36BQ8N2N9 1353 aa25.33■■□□□ 1.65
SIN3A-212ENST00000568919 PDE3BQ13370 1112 aa25.33■■□□□ 1.65
SIN3A-212ENST00000568919 CSB-PGBD3P0DP91 1061 aa25.31■■□□□ 1.64
SIN3A-212ENST00000568919 FAM196AQ6ZSG2 479 aa25.31■■□□□ 1.64
SIN3A-212ENST00000568919 OVOS2A0A0J9YW53 1432 aa25.29■■□□□ 1.64
SIN3A-212ENST00000568919 OVOS2Q6IE36 1432 aa25.29■■□□□ 1.64
SIN3A-212ENST00000568919 COG3Q96JB2 828 aa25.29■■□□□ 1.64
SIN3A-212ENST00000568919 CARD10Q9BWT7 1032 aa25.29■■□□□ 1.64
SIN3A-212ENST00000568919 FYB1O15117 783 aa25.27■■□□□ 1.64
SIN3A-212ENST00000568919 EIF4G2P78344 907 aaKnown RBP eCLIP25.27■■□□□ 1.64
SIN3A-212ENST00000568919 TRIM37O94972 964 aa25.25■■□□□ 1.63
SIN3A-212ENST00000568919 HSPA5P11021 654 aaKnown RBP25.25■■□□□ 1.63
SIN3A-212ENST00000568919 BAG6P46379 1132 aa25.25■■□□□ 1.63
SIN3A-212ENST00000568919 ABCC6O95255 1503 aa25.25■■□□□ 1.63
SIN3A-212ENST00000568919 LTN1O94822 1766 aa25.24■■□□□ 1.63
SIN3A-212ENST00000568919 FBLN1P23142 703 aa25.24■■□□□ 1.63
SIN3A-212ENST00000568919 PARP4Q9UKK3 1724 aaKnown RBP25.23■■□□□ 1.63
SIN3A-212ENST00000568919 DDB1Q16531 1140 aa25.23■■□□□ 1.63
SIN3A-212ENST00000568919 IP6K1Q92551 441 aa25.23■■□□□ 1.63
SIN3A-212ENST00000568919 CDCA7Q9BWT1 371 aaPredicted RBP25.23■■□□□ 1.63
SIN3A-212ENST00000568919 CARD14Q9BXL6 1004 aa25.23■■□□□ 1.63
SIN3A-212ENST00000568919 GGNBP2Q9H3C7 697 aa25.23■■□□□ 1.63
SIN3A-212ENST00000568919 ERBB3P21860 1342 aa25.22■■□□□ 1.63
SIN3A-212ENST00000568919 EN1Q05925 392 aaPredicted RBP25.22■■□□□ 1.63
SIN3A-212ENST00000568919 ANKRD24Q8TF21 1146 aa25.21■■□□□ 1.63
SIN3A-212ENST00000568919 RGPD1P0DJD0 1748 aa25.2■■□□□ 1.63
SIN3A-212ENST00000568919 NLRP2Q9NX02 1062 aa25.2■■□□□ 1.62
SIN3A-212ENST00000568919 MAP3K19Q56UN5 1328 aa25.19■■□□□ 1.62
SIN3A-212ENST00000568919 CCDC7Q96M83 1385 aa25.18■■□□□ 1.62
SIN3A-212ENST00000568919 POLR3GLQ9BT43 218 aa25.18■■□□□ 1.62
SIN3A-212ENST00000568919 C11orf95C9JLR9 678 aaPredicted RBP25.17■■□□□ 1.62
SIN3A-212ENST00000568919 APBA3O96018 575 aa25.17■■□□□ 1.62
SIN3A-212ENST00000568919 AMPHP49418 695 aa25.17■■□□□ 1.62
SIN3A-212ENST00000568919 MYOM1P52179 1685 aa25.17■■□□□ 1.62
SIN3A-212ENST00000568919 DISP2A7MBM2 1401 aa25.16■■□□□ 1.62
SIN3A-212ENST00000568919 EXOC5O00471 708 aa25.16■■□□□ 1.62
SIN3A-212ENST00000568919 HOXC9P31274 260 aa25.15■■□□□ 1.62
SIN3A-212ENST00000568919 MARCH10Q8NA82 808 aaPredicted RBP25.15■■□□□ 1.62
SIN3A-212ENST00000568919 LTV1Q96GA3 475 aaPredicted RBP25.15■■□□□ 1.62
SIN3A-212ENST00000568919 LRRC37A3O60309 1634 aa25.15■■□□□ 1.62
SIN3A-212ENST00000568919 TNS1Q9HBL0 1735 aaKnown RBP25.15■■□□□ 1.62
SIN3A-212ENST00000568919 WNK3Q9BYP7 1800 aa25.14■■□□□ 1.62
SIN3A-212ENST00000568919 RRS1Q15050 365 aaKnown RBP25.14■■□□□ 1.62
SIN3A-212ENST00000568919 EZH2Q15910 746 aaKnown RBP25.14■■□□□ 1.62
SIN3A-212ENST00000568919 CAMKK2Q96RR4 588 aa25.14■■□□□ 1.62
SIN3A-212ENST00000568919 NSD3Q9BZ95 1437 aa25.13■■□□□ 1.61
SIN3A-212ENST00000568919 OVOS2A0A0G2JMS6 1433 aa25.12■■□□□ 1.61
SIN3A-212ENST00000568919 IL2RBP14784 551 aa25.11■■□□□ 1.61
SIN3A-212ENST00000568919 PEAK1Q9H792 1746 aa25.11■■□□□ 1.61
SIN3A-212ENST00000568919 KIF20BQ96Q89 1820 aa25.09■■□□□ 1.61
SIN3A-212ENST00000568919 SBF2Q86WG5 1849 aa25.07■■□□□ 1.6
SIN3A-212ENST00000568919 PTF1AQ7RTS3 328 aa25.06■■□□□ 1.6
SIN3A-212ENST00000568919 PANK3Q9H999 370 aa25.06■■□□□ 1.6
SIN3A-212ENST00000568919 CGNL1Q0VF96 1302 aa25.06■■□□□ 1.6
SIN3A-212ENST00000568919 RTL1A6NKG5 1358 aa25.05■■□□□ 1.6
SIN3A-212ENST00000568919 BCL9O00512 1426 aa25.05■■□□□ 1.6
SIN3A-212ENST00000568919 BCL11BQ9C0K0 894 aaPredicted RBP25.05■■□□□ 1.6
SIN3A-212ENST00000568919 PARD3Q8TEW0 1356 aa25.04■■□□□ 1.6
SIN3A-212ENST00000568919 TNS2Q63HR2 1409 aa25.03■■□□□ 1.6
SIN3A-212ENST00000568919 PSDA5PKW4 1024 aaPredicted RBP25.03■■□□□ 1.6
SIN3A-212ENST00000568919 HSP90AB2PQ58FF8 381 aa25.03■■□□□ 1.6
SIN3A-212ENST00000568919 NBPF6Q5VWK0 638 aa25.02■■□□□ 1.6
SIN3A-212ENST00000568919 NBPF4Q96M43 638 aa25.02■■□□□ 1.6
SIN3A-212ENST00000568919 FAM208AQ9UK61 1670 aaKnown RBP25.01■■□□□ 1.59
SIN3A-212ENST00000568919 RGPD2P0DJD1 1756 aa25.01■■□□□ 1.59
SIN3A-212ENST00000568919 PLSCR1O15162 318 aa25.01■■□□□ 1.59
SIN3A-212ENST00000568919 EMILIN1Q9Y6C2 1016 aa25■■□□□ 1.59
SIN3A-212ENST00000568919 INSRP06213 1382 aa25■■□□□ 1.59
SIN3A-212ENST00000568919 KIF24Q5T7B8 1368 aa25■■□□□ 1.59
SIN3A-212ENST00000568919 FLT4P35916 1363 aa24.98■■□□□ 1.59
SIN3A-212ENST00000568919 R3HDM1Q15032 1099 aaKnown RBP24.98■■□□□ 1.59
SIN3A-212ENST00000568919 KCNQ2O43526 872 aa24.97■■□□□ 1.59
SIN3A-212ENST00000568919 DDX54Q8TDD1 881 aaKnown RBP24.97■■□□□ 1.59
SIN3A-212ENST00000568919 PPM1GO15355 546 aaPredicted RBP24.96■■□□□ 1.59
SIN3A-212ENST00000568919 USHBP1Q8N6Y0 703 aa24.96■■□□□ 1.59
SIN3A-212ENST00000568919 ACSBG1Q96GR2 724 aa24.96■■□□□ 1.59
SIN3A-212ENST00000568919 MAP2P11137 1827 aaKnown RBP24.96■■□□□ 1.59
SIN3A-212ENST00000568919 POLKQ9UBT6 870 aa24.95■■□□□ 1.58
SIN3A-212ENST00000568919 SMG6Q86US8 1419 aaKnown RBP24.95■■□□□ 1.58
SIN3A-212ENST00000568919 NBPF14Q5TI25 921 aa24.94■■□□□ 1.58
SIN3A-212ENST00000568919 PROM2Q8N271 834 aa24.94■■□□□ 1.58
SIN3A-212ENST00000568919 RREB1Q92766 1687 aa24.94■■□□□ 1.58
SIN3A-212ENST00000568919 KIF7Q2M1P5 1343 aa24.93■■□□□ 1.58
SIN3A-212ENST00000568919 WASHC2AQ641Q2 1341 aa24.93■■□□□ 1.58
SIN3A-212ENST00000568919 TNNT2P45379 298 aaPredicted RBP24.93■■□□□ 1.58
SIN3A-212ENST00000568919 ZCRB1Q8TBF4 217 aaKnown RBP24.93■■□□□ 1.58
SIN3A-212ENST00000568919 KAT6BQ8WYB5 2073 aa24.93■■□□□ 1.58
SIN3A-212ENST00000568919 NUP188Q5SRE5 1749 aa24.9■■□□□ 1.58
SIN3A-212ENST00000568919 RAPGEF4Q8WZA2 1011 aa24.9■■□□□ 1.58
SIN3A-212ENST00000568919 KNSTRNQ9Y448 316 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms