RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
FANCA-231ENST00000568626 RRS1Q15050 365 aaKnown RBP16.22■□□□□ 0.19
FANCA-231ENST00000568626 MEX3CQ5U5Q3 659 aaKnown RBP16.22■□□□□ 0.19
FANCA-231ENST00000568626 POLKQ9UBT6 870 aa16.22■□□□□ 0.19
FANCA-231ENST00000568626 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.19
FANCA-231ENST00000568626 SLIT2O94813 1529 aa16.21■□□□□ 0.19
FANCA-231ENST00000568626 AMPHP49418 695 aa16.21■□□□□ 0.19
FANCA-231ENST00000568626 NRAPQ86VF7 1730 aa16.21■□□□□ 0.19
FANCA-231ENST00000568626 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.21■□□□□ 0.19
FANCA-231ENST00000568626 IP6K1Q92551 441 aa16.2■□□□□ 0.18
FANCA-231ENST00000568626 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
FANCA-231ENST00000568626 COL5A2P05997 1499 aaPredicted RBP16.19■□□□□ 0.18
FANCA-231ENST00000568626 INSRP06213 1382 aa16.19■□□□□ 0.18
FANCA-231ENST00000568626 ZBTB7CA1YPR0 619 aa16.19■□□□□ 0.18
FANCA-231ENST00000568626 HOXC9P31274 260 aa16.19■□□□□ 0.18
FANCA-231ENST00000568626 CAMTA1Q9Y6Y1 1673 aa16.18■□□□□ 0.18
FANCA-231ENST00000568626 FAM83GA6ND36 823 aa16.18■□□□□ 0.18
FANCA-231ENST00000568626 FBLN1P23142 703 aa16.18■□□□□ 0.18
FANCA-231ENST00000568626 MTHFSP49914 203 aa16.18■□□□□ 0.18
FANCA-231ENST00000568626 CHRNA2Q15822 529 aa16.18■□□□□ 0.18
FANCA-231ENST00000568626 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
FANCA-231ENST00000568626 C8orf37Q96NL8 207 aa16.18■□□□□ 0.18
FANCA-231ENST00000568626 PPM1GO15355 546 aaPredicted RBP16.17■□□□□ 0.18
FANCA-231ENST00000568626 FNBP4Q8N3X1 1017 aaPredicted RBP16.17■□□□□ 0.18
FANCA-231ENST00000568626 NGLY1Q96IV0 654 aa16.17■□□□□ 0.18
FANCA-231ENST00000568626 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
FANCA-231ENST00000568626 COL3A1P02461 1466 aaPredicted RBP16.16■□□□□ 0.18
FANCA-231ENST00000568626 ERBB3P21860 1342 aa16.16■□□□□ 0.18
FANCA-231ENST00000568626 BTG4Q9NY30 223 aa16.15■□□□□ 0.18
FANCA-231ENST00000568626 HSP90AB2PQ58FF8 381 aa16.14■□□□□ 0.17
FANCA-231ENST00000568626 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
FANCA-231ENST00000568626 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
FANCA-231ENST00000568626 ZNF772Q68DY9 489 aaPredicted RBP16.13■□□□□ 0.17
FANCA-231ENST00000568626 AXIN2Q9Y2T1 843 aa16.13■□□□□ 0.17
FANCA-231ENST00000568626 AFF2P51816 1311 aa16.13■□□□□ 0.17
FANCA-231ENST00000568626 UNC5CLQ8IV45 518 aa16.12■□□□□ 0.17
FANCA-231ENST00000568626 ANKRD24Q8TF21 1146 aa16.12■□□□□ 0.17
FANCA-231ENST00000568626 USP21Q9UK80 565 aa16.12■□□□□ 0.17
FANCA-231ENST00000568626 CRB1P82279 1406 aa16.11■□□□□ 0.17
FANCA-231ENST00000568626 RGPD1P0DJD0 1748 aa16.11■□□□□ 0.17
FANCA-231ENST00000568626 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
FANCA-231ENST00000568626 CSB-PGBD3P0DP91 1061 aa16.11■□□□□ 0.17
FANCA-231ENST00000568626 EVA1CP58658 441 aa16.11■□□□□ 0.17
FANCA-231ENST00000568626 EIF4A2Q14240 407 aaKnown RBP16.1■□□□□ 0.17
FANCA-231ENST00000568626 STRN4Q9NRL3 753 aa16.09■□□□□ 0.17
FANCA-231ENST00000568626 NUDCQ9Y266 331 aa16.09■□□□□ 0.17
FANCA-231ENST00000568626 ATRNO75882 1429 aa16.09■□□□□ 0.17
FANCA-231ENST00000568626 NCAPD2Q15021 1401 aa16.09■□□□□ 0.17
FANCA-231ENST00000568626 CCER2I3L3R5 266 aa16.08■□□□□ 0.16
FANCA-231ENST00000568626 RXRBP28702 533 aa16.08■□□□□ 0.16
FANCA-231ENST00000568626 IL13P35225 146 aa16.08■□□□□ 0.16
FANCA-231ENST00000568626 VPS72Q15906 364 aa16.08■□□□□ 0.16
FANCA-231ENST00000568626 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.16
FANCA-231ENST00000568626 TRPC5Q9UL62 973 aaPredicted RBP16.08■□□□□ 0.16
FANCA-231ENST00000568626 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
FANCA-231ENST00000568626 CARD10Q9BWT7 1032 aa16.07■□□□□ 0.16
FANCA-231ENST00000568626 IGSF1Q8N6C5 1336 aa16.07■□□□□ 0.16
FANCA-231ENST00000568626 PLEKHG2Q9H7P9 1386 aa16.07■□□□□ 0.16
FANCA-231ENST00000568626 WNK3Q9BYP7 1800 aa16.07■□□□□ 0.16
FANCA-231ENST00000568626 RGPD2P0DJD1 1756 aa16.06■□□□□ 0.16
FANCA-231ENST00000568626 LARP1Q6PKG0 1096 aaKnown RBP16.06■□□□□ 0.16
FANCA-231ENST00000568626 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.16
FANCA-231ENST00000568626 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
FANCA-231ENST00000568626 NLRP2Q9NX02 1062 aa16.06■□□□□ 0.16
FANCA-231ENST00000568626 KDRP35968 1356 aa16.05■□□□□ 0.16
FANCA-231ENST00000568626 SPATA31A5Q5VU36 1347 aa16.05■□□□□ 0.16
FANCA-231ENST00000568626 SPATA31A7Q8IWB4 1347 aa16.05■□□□□ 0.16
FANCA-231ENST00000568626 PARP4Q9UKK3 1724 aaKnown RBP16.05■□□□□ 0.16
FANCA-231ENST00000568626 SPATA31A1Q5TZJ5 1347 aa16.04■□□□□ 0.16
FANCA-231ENST00000568626 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
FANCA-231ENST00000568626 GLI3P10071 1580 aa16.04■□□□□ 0.16
FANCA-231ENST00000568626 NBPF6Q5VWK0 638 aa16.03■□□□□ 0.16
FANCA-231ENST00000568626 MIER1Q8N108 512 aa16.03■□□□□ 0.16
FANCA-231ENST00000568626 NBPF4Q96M43 638 aa16.03■□□□□ 0.16
FANCA-231ENST00000568626 EYA1Q99502 592 aa16.03■□□□□ 0.16
FANCA-231ENST00000568626 CCDC9Q9Y3X0 531 aaKnown RBP16.03■□□□□ 0.16
FANCA-231ENST00000568626 U2SURPO15042 1029 aaKnown RBP16.02■□□□□ 0.16
FANCA-231ENST00000568626 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.16
FANCA-231ENST00000568626 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
FANCA-231ENST00000568626 CDCA7Q9BWT1 371 aaPredicted RBP16.02■□□□□ 0.16
FANCA-231ENST00000568626 BARGINQ6ZT62 677 aa16.01■□□□□ 0.15
FANCA-231ENST00000568626 GJD4Q96KN9 370 aaPredicted RBP16.01■□□□□ 0.15
FANCA-231ENST00000568626 QTRT2Q9H974 415 aaKnown RBP16.01■□□□□ 0.15
FANCA-231ENST00000568626 DISP2A7MBM2 1401 aa16.01■□□□□ 0.15
FANCA-231ENST00000568626 THSD7AQ9UPZ6 1657 aa16■□□□□ 0.15
FANCA-231ENST00000568626 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
FANCA-231ENST00000568626 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.15
FANCA-231ENST00000568626 RBM6P78332 1123 aaKnown RBP15.99■□□□□ 0.15
FANCA-231ENST00000568626 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
FANCA-231ENST00000568626 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
FANCA-231ENST00000568626 RAPGEF4Q8WZA2 1011 aa15.99■□□□□ 0.15
FANCA-231ENST00000568626 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
FANCA-231ENST00000568626 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
FANCA-231ENST00000568626 OVOS2A0A0G2JMS6 1433 aa15.99■□□□□ 0.15
FANCA-231ENST00000568626 MEGF6O75095 1541 aa15.99■□□□□ 0.15
FANCA-231ENST00000568626 FCHSD2O94868 740 aa15.98■□□□□ 0.15
FANCA-231ENST00000568626 IL2RBP14784 551 aa15.98■□□□□ 0.15
FANCA-231ENST00000568626 PKD1L3Q7Z443 1732 aa15.98■□□□□ 0.15
FANCA-231ENST00000568626 USHBP1Q8N6Y0 703 aa15.98■□□□□ 0.15
FANCA-231ENST00000568626 PNISRQ8TF01 805 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms