RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 MYBBP1AQ9BQG0 1328 aaKnown RBP21.24■□□□□ 0.99
SPG7-218ENST00000568205 COL14A1Q05707 1796 aaKnown RBP21.23■□□□□ 0.99
SPG7-218ENST00000568205 BTG4Q9NY30 223 aa21.22■□□□□ 0.99
SPG7-218ENST00000568205 AXIN2Q9Y2T1 843 aa21.22■□□□□ 0.99
SPG7-218ENST00000568205 SLIT2O94813 1529 aa21.22■□□□□ 0.99
SPG7-218ENST00000568205 BLMP54132 1417 aaPredicted RBP21.21■□□□□ 0.99
SPG7-218ENST00000568205 CDK12Q9NYV4 1490 aaPredicted RBP21.21■□□□□ 0.99
SPG7-218ENST00000568205 FNBP4Q8N3X1 1017 aaPredicted RBP21.21■□□□□ 0.99
SPG7-218ENST00000568205 LMO7Q8WWI1 1683 aa21.21■□□□□ 0.99
SPG7-218ENST00000568205 PEAK1Q9H792 1746 aa21.21■□□□□ 0.99
SPG7-218ENST00000568205 HSP90AB2PQ58FF8 381 aa21.2■□□□□ 0.98
SPG7-218ENST00000568205 CAMTA1Q9Y6Y1 1673 aa21.2■□□□□ 0.98
SPG7-218ENST00000568205 INSRP06213 1382 aa21.2■□□□□ 0.98
SPG7-218ENST00000568205 LTN1O94822 1766 aa21.2■□□□□ 0.98
SPG7-218ENST00000568205 COL18A1P39060 1754 aa21.2■□□□□ 0.98
SPG7-218ENST00000568205 AFF2P51816 1311 aa21.19■□□□□ 0.98
SPG7-218ENST00000568205 COL5A2P05997 1499 aaPredicted RBP21.18■□□□□ 0.98
SPG7-218ENST00000568205 PLCH1Q4KWH8 1693 aa21.16■□□□□ 0.98
SPG7-218ENST00000568205 BCL9LQ86UU0 1499 aa21.16■□□□□ 0.98
SPG7-218ENST00000568205 ERBB3P21860 1342 aa21.16■□□□□ 0.98
SPG7-218ENST00000568205 UNC5CLQ8IV45 518 aa21.16■□□□□ 0.98
SPG7-218ENST00000568205 ANKRD24Q8TF21 1146 aa21.16■□□□□ 0.98
SPG7-218ENST00000568205 LTV1Q96GA3 475 aaPredicted RBP21.16■□□□□ 0.98
SPG7-218ENST00000568205 CFAP53Q96M91 514 aa21.16■□□□□ 0.98
SPG7-218ENST00000568205 USP21Q9UK80 565 aa21.16■□□□□ 0.98
SPG7-218ENST00000568205 MAP2P11137 1827 aaKnown RBP21.15■□□□□ 0.98
SPG7-218ENST00000568205 EVA1CP58658 441 aa21.15■□□□□ 0.98
SPG7-218ENST00000568205 STRN4Q9NRL3 753 aa21.15■□□□□ 0.98
SPG7-218ENST00000568205 CSB-PGBD3P0DP91 1061 aa21.14■□□□□ 0.97
SPG7-218ENST00000568205 COL3A1P02461 1466 aaPredicted RBP21.13■□□□□ 0.97
SPG7-218ENST00000568205 NWD2Q9ULI1 1742 aa21.13■□□□□ 0.97
SPG7-218ENST00000568205 WDR17Q8IZU2 1322 aa21.13■□□□□ 0.97
SPG7-218ENST00000568205 EIF4A2Q14240 407 aaKnown RBP21.13■□□□□ 0.97
SPG7-218ENST00000568205 LARP1Q6PKG0 1096 aaKnown RBP21.12■□□□□ 0.97
SPG7-218ENST00000568205 NRAPQ86VF7 1730 aa21.12■□□□□ 0.97
SPG7-218ENST00000568205 DIAPH1O60610 1272 aaKnown RBP21.11■□□□□ 0.97
SPG7-218ENST00000568205 IL13P35225 146 aa21.1■□□□□ 0.97
SPG7-218ENST00000568205 VPS72Q15906 364 aa21.1■□□□□ 0.97
SPG7-218ENST00000568205 ZNF772Q68DY9 489 aaPredicted RBP21.1■□□□□ 0.97
SPG7-218ENST00000568205 TOM1L2Q6ZVM7 507 aa21.1■□□□□ 0.97
SPG7-218ENST00000568205 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
SPG7-218ENST00000568205 NLRP2Q9NX02 1062 aa21.09■□□□□ 0.97
SPG7-218ENST00000568205 CRB1P82279 1406 aa21.09■□□□□ 0.97
SPG7-218ENST00000568205 ATRNO75882 1429 aa21.08■□□□□ 0.97
SPG7-218ENST00000568205 TRPC5Q9UL62 973 aaPredicted RBP21.08■□□□□ 0.97
SPG7-218ENST00000568205 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.07■□□□□ 0.96
SPG7-218ENST00000568205 NBPF6Q5VWK0 638 aa21.07■□□□□ 0.96
SPG7-218ENST00000568205 NBPF4Q96M43 638 aa21.07■□□□□ 0.96
SPG7-218ENST00000568205 CARD10Q9BWT7 1032 aa21.07■□□□□ 0.96
SPG7-218ENST00000568205 SPATA31A5Q5VU36 1347 aa21.06■□□□□ 0.96
SPG7-218ENST00000568205 SPATA31A7Q8IWB4 1347 aa21.06■□□□□ 0.96
SPG7-218ENST00000568205 RGPD5Q99666 1765 aa21.06■□□□□ 0.96
SPG7-218ENST00000568205 CCDC184Q52MB2 194 aa21.06■□□□□ 0.96
SPG7-218ENST00000568205 MIER1Q8N108 512 aa21.06■□□□□ 0.96
SPG7-218ENST00000568205 EYA1Q99502 592 aa21.06■□□□□ 0.96
SPG7-218ENST00000568205 RGS17Q9UGC6 210 aaPredicted RBP21.06■□□□□ 0.96
SPG7-218ENST00000568205 CCDC9Q9Y3X0 531 aaKnown RBP21.06■□□□□ 0.96
SPG7-218ENST00000568205 QTRT2Q9H974 415 aaKnown RBP21.05■□□□□ 0.96
SPG7-218ENST00000568205 NUDCQ9Y266 331 aa21.05■□□□□ 0.96
SPG7-218ENST00000568205 SPATA31A1Q5TZJ5 1347 aa21.04■□□□□ 0.96
SPG7-218ENST00000568205 IGSF1Q8N6C5 1336 aa21.04■□□□□ 0.96
SPG7-218ENST00000568205 MRS2Q9HD23 443 aa21.04■□□□□ 0.96
SPG7-218ENST00000568205 U2SURPO15042 1029 aaKnown RBP21.03■□□□□ 0.96
SPG7-218ENST00000568205 USHBP1Q8N6Y0 703 aa21.03■□□□□ 0.96
SPG7-218ENST00000568205 USP35Q9P2H5 1018 aa21.03■□□□□ 0.96
SPG7-218ENST00000568205 FAM208AQ9UK61 1670 aaKnown RBP21.02■□□□□ 0.96
SPG7-218ENST00000568205 CCER2I3L3R5 266 aa21.02■□□□□ 0.96
SPG7-218ENST00000568205 TCP11L2Q8N4U5 519 aa21.02■□□□□ 0.96
SPG7-218ENST00000568205 GJD4Q96KN9 370 aaPredicted RBP21.02■□□□□ 0.96
SPG7-218ENST00000568205 NCAPD2Q15021 1401 aa21.02■□□□□ 0.96
SPG7-218ENST00000568205 THRAP3Q9Y2W1 955 aaKnown RBP21■□□□□ 0.95
SPG7-218ENST00000568205 U2AF1L5P0DN76 240 aaPredicted RBP20.99■□□□□ 0.95
SPG7-218ENST00000568205 U2AF1Q01081 240 aaKnown RBP eCLIP20.99■□□□□ 0.95
SPG7-218ENST00000568205 SULT6B1Q6IMI4 303 aa20.99■□□□□ 0.95
SPG7-218ENST00000568205 POTEAQ6S8J7 498 aa20.99■□□□□ 0.95
SPG7-218ENST00000568205 AEBP1Q8IUX7 1158 aa20.99■□□□□ 0.95
SPG7-218ENST00000568205 KDRP35968 1356 aa20.98■□□□□ 0.95
SPG7-218ENST00000568205 RGPD1P0DJD0 1748 aa20.98■□□□□ 0.95
SPG7-218ENST00000568205 RBM6P78332 1123 aaKnown RBP20.98■□□□□ 0.95
SPG7-218ENST00000568205 BARGINQ6ZT62 677 aa20.98■□□□□ 0.95
SPG7-218ENST00000568205 GLI3P10071 1580 aa20.97■□□□□ 0.95
SPG7-218ENST00000568205 HMOX1P09601 288 aa20.97■□□□□ 0.95
SPG7-218ENST00000568205 WDR43Q15061 677 aaKnown RBP eCLIP20.97■□□□□ 0.95
SPG7-218ENST00000568205 FAM98CQ17RN3 349 aaKnown RBP20.96■□□□□ 0.95
SPG7-218ENST00000568205 DISP2A7MBM2 1401 aa20.95■□□□□ 0.95
SPG7-218ENST00000568205 IL2RBP14784 551 aa20.95■□□□□ 0.94
SPG7-218ENST00000568205 RXRBP28702 533 aa20.95■□□□□ 0.94
SPG7-218ENST00000568205 PNISRQ8TF01 805 aaKnown RBP20.95■□□□□ 0.94
SPG7-218ENST00000568205 RAPGEF4Q8WZA2 1011 aa20.95■□□□□ 0.94
SPG7-218ENST00000568205 CDCA7Q9BWT1 371 aaPredicted RBP20.95■□□□□ 0.94
SPG7-218ENST00000568205 RGPD2P0DJD1 1756 aa20.95■□□□□ 0.94
SPG7-218ENST00000568205 MEGF6O75095 1541 aa20.94■□□□□ 0.94
SPG7-218ENST00000568205 FCHSD2O94868 740 aa20.93■□□□□ 0.94
SPG7-218ENST00000568205 TATP17735 454 aaPredicted RBP20.93■□□□□ 0.94
SPG7-218ENST00000568205 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
SPG7-218ENST00000568205 ONECUT3O60422 494 aaPredicted RBP20.92■□□□□ 0.94
SPG7-218ENST00000568205 ADAMTS8Q9UP79 889 aa20.92■□□□□ 0.94
SPG7-218ENST00000568205 OVOS2A0A0G2JMS6 1433 aa20.91■□□□□ 0.94
SPG7-218ENST00000568205 PLEKHG2Q9H7P9 1386 aa20.9■□□□□ 0.94
SPG7-218ENST00000568205 A0A0G2JS52 829 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms