RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 PPP1R26Q5T8A7 1209 aaPredicted RBP7.11□□□□□ -1.27
TCF4-239ENST00000568186 KCTD17Q8N5Z5 321 aa7.11□□□□□ -1.27
TCF4-239ENST00000568186 CNTNAP3BQ96NU0 1288 aa7.11□□□□□ -1.27
TCF4-239ENST00000568186 CNTNAP3Q9BZ76 1288 aa7.11□□□□□ -1.27
TCF4-239ENST00000568186 CLK2P49760 499 aaKnown RBP7.1□□□□□ -1.27
TCF4-239ENST00000568186 PDE4DQ08499 809 aa7.1□□□□□ -1.27
TCF4-239ENST00000568186 CBLBQ13191 982 aa7.1□□□□□ -1.27
TCF4-239ENST00000568186 GPKOWQ92917 476 aaPredicted RBP eCLIP7.1□□□□□ -1.27
TCF4-239ENST00000568186 FIGNL2A6NMB9 653 aa7.09□□□□□ -1.27
TCF4-239ENST00000568186 SPINT1O43278 529 aa7.09□□□□□ -1.27
TCF4-239ENST00000568186 Q6ZVU0 165 aa7.09□□□□□ -1.27
TCF4-239ENST00000568186 COL25A1Q9BXS0 654 aaPredicted RBP7.09□□□□□ -1.27
TCF4-239ENST00000568186 SUZ12Q15022 739 aaKnown RBP7.08□□□□□ -1.28
TCF4-239ENST00000568186 CCDC155Q8N6L0 562 aa7.08□□□□□ -1.28
TCF4-239ENST00000568186 PGPEP1Q9NXJ5 209 aa7.08□□□□□ -1.28
TCF4-239ENST00000568186 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
TCF4-239ENST00000568186 NANOS1Q8WY41 292 aaKnown RBP7.07□□□□□ -1.28
TCF4-239ENST00000568186 SLC10A4Q96EP9 437 aa7.07□□□□□ -1.28
TCF4-239ENST00000568186 ADAMTS8Q9UP79 889 aa7.07□□□□□ -1.28
TCF4-239ENST00000568186 RASSF7Q02833 373 aa7.06□□□□□ -1.28
TCF4-239ENST00000568186 CTDSPL2Q05D32 466 aa7.06□□□□□ -1.28
TCF4-239ENST00000568186 ZNF385CQ66K41 422 aaPredicted RBP7.06□□□□□ -1.28
TCF4-239ENST00000568186 TMEM151AQ8N4L1 468 aa7.06□□□□□ -1.28
TCF4-239ENST00000568186 ARHGAP9Q9BRR9 750 aa7.06□□□□□ -1.28
TCF4-239ENST00000568186 SLC35F4A4IF30 521 aa7.05□□□□□ -1.28
TCF4-239ENST00000568186 RNF225M0QZC1 329 aaPredicted RBP7.05□□□□□ -1.28
TCF4-239ENST00000568186 GDF11O95390 407 aa7.05□□□□□ -1.28
TCF4-239ENST00000568186 PDXDC2PQ6P474 469 aa7.05□□□□□ -1.28
TCF4-239ENST00000568186 KCTD15Q96SI1 283 aaPredicted RBP7.05□□□□□ -1.28
TCF4-239ENST00000568186 POLR3EQ9NVU0 708 aa7.05□□□□□ -1.28
TCF4-239ENST00000568186 ITGA6P23229 1130 aa7.04□□□□□ -1.28
TCF4-239ENST00000568186 CTSOP43234 321 aaPredicted RBP7.04□□□□□ -1.28
TCF4-239ENST00000568186 INTS6LQ5JSJ4 861 aaKnown RBP7.04□□□□□ -1.28
TCF4-239ENST00000568186 SVOPQ8N4V2 548 aa7.04□□□□□ -1.28
TCF4-239ENST00000568186 LRRN4Q8WUT4 740 aa7.04□□□□□ -1.28
TCF4-239ENST00000568186 AGBL1Q96MI9 1066 aa7.04□□□□□ -1.28
TCF4-239ENST00000568186 FKBPLQ9UIM3 349 aa7.04□□□□□ -1.28
TCF4-239ENST00000568186 CDV3Q9UKY7 258 aaKnown RBP7.04□□□□□ -1.28
TCF4-239ENST00000568186 RELBQ01201 579 aa7.03□□□□□ -1.28
TCF4-239ENST00000568186 DHX9Q08211 1270 aaKnown RBP7.03□□□□□ -1.28
TCF4-239ENST00000568186 WHAMMQ8TF30 809 aa7.03□□□□□ -1.28
TCF4-239ENST00000568186 INSM2Q96T92 566 aaPredicted RBP7.03□□□□□ -1.28
TCF4-239ENST00000568186 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
TCF4-239ENST00000568186 CDC14CA4D256 554 aa7.02□□□□□ -1.29
TCF4-239ENST00000568186 SLURP2P0DP57 97 aa7.02□□□□□ -1.29
TCF4-239ENST00000568186 VWA5B2Q8N398 1253 aa7.02□□□□□ -1.29
TCF4-239ENST00000568186 OCSTAMPQ9BR26 566 aa7.02□□□□□ -1.29
TCF4-239ENST00000568186 SLC24A3Q9HC58 644 aa7.02□□□□□ -1.29
TCF4-239ENST00000568186 ZC3H4Q9UPT8 1303 aaKnown RBP7.01□□□□□ -1.29
TCF4-239ENST00000568186 SENP3-EIF4A1A0A087X0R7 540 aa7.01□□□□□ -1.29
TCF4-239ENST00000568186 NR6A1Q15406 480 aa7.01□□□□□ -1.29
TCF4-239ENST00000568186 FBXO31Q5XUX0 539 aaPredicted RBP7.01□□□□□ -1.29
TCF4-239ENST00000568186 ZBTB33Q86T24 672 aa7.01□□□□□ -1.29
TCF4-239ENST00000568186 RNF217Q8TC41 542 aa7.01□□□□□ -1.29
TCF4-239ENST00000568186 POLMQ9NP87 494 aaPredicted RBP7.01□□□□□ -1.29
TCF4-239ENST00000568186 ARHGEF15O94989 841 aa7□□□□□ -1.29
TCF4-239ENST00000568186 SV2AQ7L0J3 742 aa7□□□□□ -1.29
TCF4-239ENST00000568186 ADAM32Q8TC27 787 aa6.99□□□□□ -1.29
TCF4-239ENST00000568186 ZNF395Q9H8N7 513 aaPredicted RBP6.99□□□□□ -1.29
TCF4-239ENST00000568186 IRS1P35568 1242 aa6.98□□□□□ -1.29
TCF4-239ENST00000568186 PTK2Q05397 1052 aa6.98□□□□□ -1.29
TCF4-239ENST00000568186 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
TCF4-239ENST00000568186 ZNF784Q8NCA9 323 aaPredicted RBP6.98□□□□□ -1.29
TCF4-239ENST00000568186 TMPRSS4Q9NRS4 437 aa6.98□□□□□ -1.29
TCF4-239ENST00000568186 ADH1AP07327 375 aa6.97□□□□□ -1.29
TCF4-239ENST00000568186 NBPF20Q3BBV1 942 aa6.97□□□□□ -1.29
TCF4-239ENST00000568186 GPSM3Q9Y4H4 160 aa6.97□□□□□ -1.29
TCF4-239ENST00000568186 DNMT3AQ9Y6K1 912 aaPredicted RBP6.97□□□□□ -1.29
TCF4-239ENST00000568186 ADAMTS2O95450 1211 aa6.96□□□□□ -1.3
TCF4-239ENST00000568186 RAB15P59190 212 aa6.96□□□□□ -1.3
TCF4-239ENST00000568186 LILRA1O75019 489 aa6.95□□□□□ -1.3
TCF4-239ENST00000568186 GAS6Q14393 721 aa6.95□□□□□ -1.3
TCF4-239ENST00000568186 PPP2R2DQ66LE6 453 aa6.95□□□□□ -1.3
TCF4-239ENST00000568186 GPAT2Q6NUI2 795 aa6.95□□□□□ -1.3
TCF4-239ENST00000568186 KDF1Q8NAX2 398 aaPredicted RBP6.95□□□□□ -1.3
TCF4-239ENST00000568186 PROCA1Q8NCQ7 364 aaPredicted RBP6.95□□□□□ -1.3
TCF4-239ENST00000568186 EPS8L1Q8TE68 723 aa6.95□□□□□ -1.3
TCF4-239ENST00000568186 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.95□□□□□ -1.3
TCF4-239ENST00000568186 CUEDC1Q9NWM3 386 aaPredicted RBP6.95□□□□□ -1.3
TCF4-239ENST00000568186 ERVH48-1M5A8F1 160 aa6.94□□□□□ -1.3
TCF4-239ENST00000568186 ADD1P35611 737 aaKnown RBP6.94□□□□□ -1.3
TCF4-239ENST00000568186 MARSP56192 900 aaKnown RBP6.94□□□□□ -1.3
TCF4-239ENST00000568186 SKIV2LQ15477 1246 aaKnown RBP6.94□□□□□ -1.3
TCF4-239ENST00000568186 SH3D19Q5HYK7 790 aa6.94□□□□□ -1.3
TCF4-239ENST00000568186 LYPD4Q6UWN0 246 aa6.94□□□□□ -1.3
TCF4-239ENST00000568186 PTGIRP43119 386 aa6.93□□□□□ -1.3
TCF4-239ENST00000568186 KANK3Q6NY19 840 aa6.93□□□□□ -1.3
TCF4-239ENST00000568186 HMX1Q9NP08 348 aaPredicted RBP6.93□□□□□ -1.3
TCF4-239ENST00000568186 ESPNB1AK53 854 aa6.92□□□□□ -1.3
TCF4-239ENST00000568186 AP1G2O75843 785 aa6.92□□□□□ -1.3
TCF4-239ENST00000568186 SRSF11Q05519 484 aaKnown RBP6.92□□□□□ -1.3
TCF4-239ENST00000568186 LYSMD3Q7Z3D4 306 aa6.92□□□□□ -1.3
TCF4-239ENST00000568186 DZIP3Q86Y13 1208 aaKnown RBP6.92□□□□□ -1.3
TCF4-239ENST00000568186 SCARF2Q96GP6 870 aaPredicted RBP6.92□□□□□ -1.3
TCF4-239ENST00000568186 IGHA1P01876 353 aa6.91□□□□□ -1.3
TCF4-239ENST00000568186 CELA2BP08218 269 aaPredicted RBP6.91□□□□□ -1.3
TCF4-239ENST00000568186 MAP3K10Q02779 954 aa6.91□□□□□ -1.3
TCF4-239ENST00000568186 USP17L8P0C7I0 530 aa6.9□□□□□ -1.3
TCF4-239ENST00000568186 PNMA1Q8ND90 353 aa6.9□□□□□ -1.3
TCF4-239ENST00000568186 ZNF837Q96EG3 531 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms