RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 RGPD5Q99666 1765 aa24.77■■□□□ 1.56
EDC3-214ENST00000568176 U2SURPO15042 1029 aaKnown RBP24.77■■□□□ 1.56
EDC3-214ENST00000568176 KIF24Q5T7B8 1368 aa24.77■■□□□ 1.56
EDC3-214ENST00000568176 COL22A1Q8NFW1 1626 aaPredicted RBP24.76■■□□□ 1.55
EDC3-214ENST00000568176 RTL1A6NKG5 1358 aa24.76■■□□□ 1.55
EDC3-214ENST00000568176 HNRNPUQ00839 825 aaKnown RBP eCLIP24.76■■□□□ 1.55
EDC3-214ENST00000568176 COL18A1P39060 1754 aa24.76■■□□□ 1.55
EDC3-214ENST00000568176 U2AF1L5P0DN76 240 aaPredicted RBP24.75■■□□□ 1.55
EDC3-214ENST00000568176 U2AF1Q01081 240 aaKnown RBP eCLIP24.75■■□□□ 1.55
EDC3-214ENST00000568176 CCDC146Q8IYE0 955 aa24.75■■□□□ 1.55
EDC3-214ENST00000568176 IP6K1Q92551 441 aa24.75■■□□□ 1.55
EDC3-214ENST00000568176 RGPD1P0DJD0 1748 aa24.74■■□□□ 1.55
EDC3-214ENST00000568176 AXIN2Q9Y2T1 843 aa24.74■■□□□ 1.55
EDC3-214ENST00000568176 KIAA0232Q92628 1395 aa24.73■■□□□ 1.55
EDC3-214ENST00000568176 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
EDC3-214ENST00000568176 CHRNA2Q15822 529 aa24.72■■□□□ 1.55
EDC3-214ENST00000568176 CPDO75976 1380 aa24.71■■□□□ 1.55
EDC3-214ENST00000568176 LTV1Q96GA3 475 aaPredicted RBP24.7■■□□□ 1.55
EDC3-214ENST00000568176 RGPD2P0DJD1 1756 aa24.7■■□□□ 1.54
EDC3-214ENST00000568176 HMOX1P09601 288 aa24.69■■□□□ 1.54
EDC3-214ENST00000568176 HAP1P54257 671 aaPredicted RBP24.68■■□□□ 1.54
EDC3-214ENST00000568176 AEBP1Q8IUX7 1158 aa24.67■■□□□ 1.54
EDC3-214ENST00000568176 PLEKHF1Q96S99 279 aa24.66■■□□□ 1.54
EDC3-214ENST00000568176 EYA1Q99502 592 aa24.66■■□□□ 1.54
EDC3-214ENST00000568176 RSPH6AQ9H0K4 717 aa24.66■■□□□ 1.54
EDC3-214ENST00000568176 LMO7Q8WWI1 1683 aa24.65■■□□□ 1.54
EDC3-214ENST00000568176 HSPA1LP34931 641 aa24.64■■□□□ 1.54
EDC3-214ENST00000568176 PRDM11Q9NQV5 511 aa24.64■■□□□ 1.54
EDC3-214ENST00000568176 ABCC6O95255 1503 aa24.64■■□□□ 1.53
EDC3-214ENST00000568176 APAF1O14727 1248 aa24.63■■□□□ 1.53
EDC3-214ENST00000568176 ANKRD24Q8TF21 1146 aa24.63■■□□□ 1.53
EDC3-214ENST00000568176 SALL2Q9Y467 1007 aaPredicted RBP24.63■■□□□ 1.53
EDC3-214ENST00000568176 CAMTA1Q9Y6Y1 1673 aa24.63■■□□□ 1.53
EDC3-214ENST00000568176 IGSF1Q8N6C5 1336 aa24.63■■□□□ 1.53
EDC3-214ENST00000568176 SULT6B1Q6IMI4 303 aa24.63■■□□□ 1.53
EDC3-214ENST00000568176 RUNDC1Q96C34 613 aa24.63■■□□□ 1.53
EDC3-214ENST00000568176 FAM83GA6ND36 823 aa24.62■■□□□ 1.53
EDC3-214ENST00000568176 FCHSD2O94868 740 aa24.62■■□□□ 1.53
EDC3-214ENST00000568176 PRKAR2BP31323 418 aa24.62■■□□□ 1.53
EDC3-214ENST00000568176 NBPF6Q5VWK0 638 aa24.61■■□□□ 1.53
EDC3-214ENST00000568176 NBPF4Q96M43 638 aa24.61■■□□□ 1.53
EDC3-214ENST00000568176 USHBP1Q8N6Y0 703 aa24.61■■□□□ 1.53
EDC3-214ENST00000568176 ERBB3P21860 1342 aa24.61■■□□□ 1.53
EDC3-214ENST00000568176 TCP11L2Q8N4U5 519 aa24.59■■□□□ 1.53
EDC3-214ENST00000568176 PHACTR3Q96KR7 559 aa24.59■■□□□ 1.53
EDC3-214ENST00000568176 ZBED9Q6R2W3 1325 aa24.59■■□□□ 1.53
EDC3-214ENST00000568176 KDRP35968 1356 aa24.58■■□□□ 1.53
EDC3-214ENST00000568176 JCADQ9P266 1359 aa24.58■■□□□ 1.53
EDC3-214ENST00000568176 NUTM2BA6NNL0 878 aaPredicted RBP24.58■■□□□ 1.53
EDC3-214ENST00000568176 NUTM2EB1AL46 878 aaPredicted RBP24.58■■□□□ 1.53
EDC3-214ENST00000568176 NUTM2AQ8IVF1 878 aaPredicted RBP24.58■■□□□ 1.53
EDC3-214ENST00000568176 RRP7AQ9Y3A4 280 aaKnown RBP24.58■■□□□ 1.53
EDC3-214ENST00000568176 ADAMTS2O95450 1211 aa24.56■■□□□ 1.52
EDC3-214ENST00000568176 COL14A1Q05707 1796 aaKnown RBP24.55■■□□□ 1.52
EDC3-214ENST00000568176 COL5A2P05997 1499 aaPredicted RBP24.55■■□□□ 1.52
EDC3-214ENST00000568176 NCAPD2Q15021 1401 aa24.54■■□□□ 1.52
EDC3-214ENST00000568176 NEUROD2Q15784 382 aa24.54■■□□□ 1.52
EDC3-214ENST00000568176 FAM208AQ9UK61 1670 aaKnown RBP24.53■■□□□ 1.52
EDC3-214ENST00000568176 MAPK8IP3Q9UPT6 1336 aa24.52■■□□□ 1.52
EDC3-214ENST00000568176 PLCH1Q4KWH8 1693 aa24.52■■□□□ 1.52
EDC3-214ENST00000568176 PNNQ9H307 717 aaKnown RBP24.51■■□□□ 1.51
EDC3-214ENST00000568176 TMPOP42166 694 aaKnown RBP24.51■■□□□ 1.51
EDC3-214ENST00000568176 BTG4Q9NY30 223 aa24.51■■□□□ 1.51
EDC3-214ENST00000568176 LRP6O75581 1613 aa24.5■■□□□ 1.51
EDC3-214ENST00000568176 DLG5Q8TDM6 1919 aa24.5■■□□□ 1.51
EDC3-214ENST00000568176 CSB-PGBD3P0DP91 1061 aa24.5■■□□□ 1.51
EDC3-214ENST00000568176 NLRP2Q9NX02 1062 aa24.5■■□□□ 1.51
EDC3-214ENST00000568176 ZNF521Q96K83 1311 aa24.5■■□□□ 1.51
EDC3-214ENST00000568176 WDR17Q8IZU2 1322 aa24.48■■□□□ 1.51
EDC3-214ENST00000568176 STRN4Q9NRL3 753 aa24.48■■□□□ 1.51
EDC3-214ENST00000568176 LARP1Q6PKG0 1096 aaKnown RBP24.47■■□□□ 1.51
EDC3-214ENST00000568176 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
EDC3-214ENST00000568176 NRAPQ86VF7 1730 aa24.46■■□□□ 1.51
EDC3-214ENST00000568176 NFE2L2Q16236 605 aa24.46■■□□□ 1.51
EDC3-214ENST00000568176 TRIM35Q9UPQ4 493 aa24.46■■□□□ 1.51
EDC3-214ENST00000568176 SPATA31A6Q5VVP1 1343 aa24.46■■□□□ 1.51
EDC3-214ENST00000568176 WWC1Q8IX03 1113 aa24.45■■□□□ 1.5
EDC3-214ENST00000568176 RIPK4P57078 832 aa24.45■■□□□ 1.5
EDC3-214ENST00000568176 MTHFSDQ2M296 383 aaKnown RBP24.45■■□□□ 1.5
EDC3-214ENST00000568176 CDCA7LQ96GN5 454 aa24.45■■□□□ 1.5
EDC3-214ENST00000568176 NEFMP07197 916 aa24.44■■□□□ 1.5
EDC3-214ENST00000568176 EVA1CP58658 441 aa24.43■■□□□ 1.5
EDC3-214ENST00000568176 TOM1L2Q6ZVM7 507 aa24.43■■□□□ 1.5
EDC3-214ENST00000568176 MEGF6O75095 1541 aa24.42■■□□□ 1.5
EDC3-214ENST00000568176 SLIT2O94813 1529 aa24.42■■□□□ 1.5
EDC3-214ENST00000568176 CCDC27Q2M243 656 aa24.41■■□□□ 1.5
EDC3-214ENST00000568176 NGEFQ8N5V2 710 aa24.41■■□□□ 1.5
EDC3-214ENST00000568176 SPINK5Q9NQ38 1064 aaPredicted RBP24.41■■□□□ 1.5
EDC3-214ENST00000568176 NWD2Q9ULI1 1742 aa24.4■■□□□ 1.5
EDC3-214ENST00000568176 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
EDC3-214ENST00000568176 C8orf37Q96NL8 207 aa24.4■■□□□ 1.5
EDC3-214ENST00000568176 CRB1P82279 1406 aa24.39■■□□□ 1.5
EDC3-214ENST00000568176 CARD10Q9BWT7 1032 aa24.39■■□□□ 1.49
EDC3-214ENST00000568176 THUMPD2Q9BTF0 503 aaKnown RBP24.38■■□□□ 1.49
EDC3-214ENST00000568176 DCTN1Q14203 1278 aa24.36■■□□□ 1.49
EDC3-214ENST00000568176 USP35Q9P2H5 1018 aa24.36■■□□□ 1.49
EDC3-214ENST00000568176 GOLGA2Q08379 1002 aa24.35■■□□□ 1.49
EDC3-214ENST00000568176 NGLY1Q96IV0 654 aa24.35■■□□□ 1.49
EDC3-214ENST00000568176 BCL9LQ86UU0 1499 aa24.35■■□□□ 1.49
EDC3-214ENST00000568176 PDE3BQ13370 1112 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms