RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ZBTB7CA1YPR0 619 aa24.52■■□□□ 1.52
COMMD4-222ENST00000568034 CNGB1Q14028 1251 aaPredicted RBP24.52■■□□□ 1.52
COMMD4-222ENST00000568034 EMILIN1Q9Y6C2 1016 aa24.52■■□□□ 1.52
COMMD4-222ENST00000568034 RTL1A6NKG5 1358 aa24.52■■□□□ 1.52
COMMD4-222ENST00000568034 BTG4Q9NY30 223 aa24.51■■□□□ 1.51
COMMD4-222ENST00000568034 POLKQ9UBT6 870 aa24.51■■□□□ 1.51
COMMD4-222ENST00000568034 RGPD5Q99666 1765 aa24.51■■□□□ 1.51
COMMD4-222ENST00000568034 PARD3Q8TEW0 1356 aa24.51■■□□□ 1.51
COMMD4-222ENST00000568034 COL5A2P05997 1499 aaPredicted RBP24.51■■□□□ 1.51
COMMD4-222ENST00000568034 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
COMMD4-222ENST00000568034 HOXC9P31274 260 aa24.49■■□□□ 1.51
COMMD4-222ENST00000568034 IP6K1Q92551 441 aa24.49■■□□□ 1.51
COMMD4-222ENST00000568034 USP21Q9UK80 565 aa24.49■■□□□ 1.51
COMMD4-222ENST00000568034 KIF24Q5T7B8 1368 aa24.49■■□□□ 1.51
COMMD4-222ENST00000568034 SOCS7O14512 581 aa24.48■■□□□ 1.51
COMMD4-222ENST00000568034 BLMP54132 1417 aaPredicted RBP24.48■■□□□ 1.51
COMMD4-222ENST00000568034 UNC5CLQ8IV45 518 aa24.48■■□□□ 1.51
COMMD4-222ENST00000568034 ATRNO75882 1429 aa24.47■■□□□ 1.51
COMMD4-222ENST00000568034 FLT4P35916 1363 aa24.47■■□□□ 1.51
COMMD4-222ENST00000568034 AMPHP49418 695 aa24.45■■□□□ 1.5
COMMD4-222ENST00000568034 CDK12Q9NYV4 1490 aaPredicted RBP24.44■■□□□ 1.5
COMMD4-222ENST00000568034 ERBB3P21860 1342 aa24.43■■□□□ 1.5
COMMD4-222ENST00000568034 ZNF772Q68DY9 489 aaPredicted RBP24.43■■□□□ 1.5
COMMD4-222ENST00000568034 INSRP06213 1382 aa24.42■■□□□ 1.5
COMMD4-222ENST00000568034 HSP90AB2PQ58FF8 381 aa24.42■■□□□ 1.5
COMMD4-222ENST00000568034 PPP2R1AP30153 589 aa24.41■■□□□ 1.5
COMMD4-222ENST00000568034 VPS72Q15906 364 aa24.41■■□□□ 1.5
COMMD4-222ENST00000568034 POTEAQ6S8J7 498 aa24.41■■□□□ 1.5
COMMD4-222ENST00000568034 STRN4Q9NRL3 753 aa24.41■■□□□ 1.5
COMMD4-222ENST00000568034 WDR17Q8IZU2 1322 aa24.4■■□□□ 1.5
COMMD4-222ENST00000568034 PPM1GO15355 546 aaPredicted RBP24.4■■□□□ 1.5
COMMD4-222ENST00000568034 LARP1Q6PKG0 1096 aaKnown RBP24.4■■□□□ 1.5
COMMD4-222ENST00000568034 TRPC5Q9UL62 973 aaPredicted RBP24.4■■□□□ 1.5
COMMD4-222ENST00000568034 GLI3P10071 1580 aa24.4■■□□□ 1.5
COMMD4-222ENST00000568034 MTHFSP49914 203 aa24.39■■□□□ 1.49
COMMD4-222ENST00000568034 RALBP1Q15311 655 aa24.39■■□□□ 1.49
COMMD4-222ENST00000568034 ANKRD24Q8TF21 1146 aa24.39■■□□□ 1.49
COMMD4-222ENST00000568034 PRKRIP1Q9H875 184 aaPredicted RBP24.39■■□□□ 1.49
COMMD4-222ENST00000568034 QTRT2Q9H974 415 aaKnown RBP24.38■■□□□ 1.49
COMMD4-222ENST00000568034 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
COMMD4-222ENST00000568034 SPATA31A5Q5VU36 1347 aa24.37■■□□□ 1.49
COMMD4-222ENST00000568034 SPATA31A7Q8IWB4 1347 aa24.37■■□□□ 1.49
COMMD4-222ENST00000568034 CRB1P82279 1406 aa24.37■■□□□ 1.49
COMMD4-222ENST00000568034 EVA1CP58658 441 aa24.37■■□□□ 1.49
COMMD4-222ENST00000568034 FAM208AQ9UK61 1670 aaKnown RBP24.37■■□□□ 1.49
COMMD4-222ENST00000568034 RGPD2P0DJD1 1756 aa24.35■■□□□ 1.49
COMMD4-222ENST00000568034 LTV1Q96GA3 475 aaPredicted RBP24.35■■□□□ 1.49
COMMD4-222ENST00000568034 SPATA31A1Q5TZJ5 1347 aa24.35■■□□□ 1.49
COMMD4-222ENST00000568034 GJD4Q96KN9 370 aaPredicted RBP24.34■■□□□ 1.49
COMMD4-222ENST00000568034 CSB-PGBD3P0DP91 1061 aa24.33■■□□□ 1.49
COMMD4-222ENST00000568034 EIF4A2Q14240 407 aaKnown RBP24.33■■□□□ 1.49
COMMD4-222ENST00000568034 TOM1L2Q6ZVM7 507 aa24.32■■□□□ 1.48
COMMD4-222ENST00000568034 CARD10Q9BWT7 1032 aa24.32■■□□□ 1.48
COMMD4-222ENST00000568034 MYBBP1AQ9BQG0 1328 aaKnown RBP24.32■■□□□ 1.48
COMMD4-222ENST00000568034 NCAPD2Q15021 1401 aa24.31■■□□□ 1.48
COMMD4-222ENST00000568034 RBM6P78332 1123 aaKnown RBP24.3■■□□□ 1.48
COMMD4-222ENST00000568034 CCDC9Q9Y3X0 531 aaKnown RBP24.3■■□□□ 1.48
COMMD4-222ENST00000568034 RGPD1P0DJD0 1748 aa24.3■■□□□ 1.48
COMMD4-222ENST00000568034 WNK3Q9BYP7 1800 aa24.29■■□□□ 1.48
COMMD4-222ENST00000568034 IL13P35225 146 aa24.29■■□□□ 1.48
COMMD4-222ENST00000568034 NBPF6Q5VWK0 638 aa24.29■■□□□ 1.48
COMMD4-222ENST00000568034 NBPF4Q96M43 638 aa24.29■■□□□ 1.48
COMMD4-222ENST00000568034 NLRP2Q9NX02 1062 aa24.28■■□□□ 1.48
COMMD4-222ENST00000568034 THSD7AQ9UPZ6 1657 aa24.27■■□□□ 1.48
COMMD4-222ENST00000568034 DISP2A7MBM2 1401 aa24.27■■□□□ 1.48
COMMD4-222ENST00000568034 RXRBP28702 533 aa24.27■■□□□ 1.48
COMMD4-222ENST00000568034 TCP11L2Q8N4U5 519 aa24.27■■□□□ 1.48
COMMD4-222ENST00000568034 USP35Q9P2H5 1018 aa24.27■■□□□ 1.48
COMMD4-222ENST00000568034 ANP32CO43423 234 aa24.26■■□□□ 1.47
COMMD4-222ENST00000568034 EYA1Q99502 592 aa24.26■■□□□ 1.47
COMMD4-222ENST00000568034 BARGINQ6ZT62 677 aa24.25■■□□□ 1.47
COMMD4-222ENST00000568034 THRAP3Q9Y2W1 955 aaKnown RBP24.25■■□□□ 1.47
COMMD4-222ENST00000568034 IGSF1Q8N6C5 1336 aa24.25■■□□□ 1.47
COMMD4-222ENST00000568034 RGS12O14924 1447 aa24.25■■□□□ 1.47
COMMD4-222ENST00000568034 ONECUT3O60422 494 aaPredicted RBP24.24■■□□□ 1.47
COMMD4-222ENST00000568034 FAM98CQ17RN3 349 aaKnown RBP24.24■■□□□ 1.47
COMMD4-222ENST00000568034 USHBP1Q8N6Y0 703 aa24.24■■□□□ 1.47
COMMD4-222ENST00000568034 DIAPH1O60610 1272 aaKnown RBP24.23■■□□□ 1.47
COMMD4-222ENST00000568034 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
COMMD4-222ENST00000568034 MEGF6O75095 1541 aa24.21■■□□□ 1.47
COMMD4-222ENST00000568034 PARP4Q9UKK3 1724 aaKnown RBP24.21■■□□□ 1.47
COMMD4-222ENST00000568034 LRRC37A3O60309 1634 aa24.2■■□□□ 1.46
COMMD4-222ENST00000568034 KDRP35968 1356 aa24.19■■□□□ 1.46
COMMD4-222ENST00000568034 DIEXFQ68CQ4 756 aaKnown RBP24.19■■□□□ 1.46
COMMD4-222ENST00000568034 CCDC184Q52MB2 194 aa24.17■■□□□ 1.46
COMMD4-222ENST00000568034 AEBP1Q8IUX7 1158 aa24.17■■□□□ 1.46
COMMD4-222ENST00000568034 SEPT12Q8IYM1 358 aa24.17■■□□□ 1.46
COMMD4-222ENST00000568034 BRWD3Q6RI45 1802 aa24.16■■□□□ 1.46
COMMD4-222ENST00000568034 OVOS2A0A0G2JMS6 1433 aa24.16■■□□□ 1.46
COMMD4-222ENST00000568034 IL2RBP14784 551 aa24.15■■□□□ 1.46
COMMD4-222ENST00000568034 SULT6B1Q6IMI4 303 aa24.14■■□□□ 1.45
COMMD4-222ENST00000568034 CDCA7Q9BWT1 371 aaPredicted RBP24.14■■□□□ 1.45
COMMD4-222ENST00000568034 SHANK3Q9BYB0 1731 aa24.13■■□□□ 1.45
COMMD4-222ENST00000568034 TNS2Q63HR2 1409 aa24.13■■□□□ 1.45
COMMD4-222ENST00000568034 U2SURPO15042 1029 aaKnown RBP24.12■■□□□ 1.45
COMMD4-222ENST00000568034 PKD1L3Q7Z443 1732 aa24.12■■□□□ 1.45
COMMD4-222ENST00000568034 HMOX1P09601 288 aa24.11■■□□□ 1.45
COMMD4-222ENST00000568034 NUDCQ9Y266 331 aa24.11■■□□□ 1.45
COMMD4-222ENST00000568034 A0A0G2JS52 829 aa24.1■■□□□ 1.45
COMMD4-222ENST00000568034 MYT1Q01538 1121 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms