RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 TSGA10IPQ3SY00 556 aa9.54□□□□□ -0.88
SHCBP1-206ENST00000567698 DZIP3Q86Y13 1208 aaKnown RBP9.54□□□□□ -0.88
SHCBP1-206ENST00000567698 SLC10A4Q96EP9 437 aa9.54□□□□□ -0.88
SHCBP1-206ENST00000567698 NFATC2IPQ8NCF5 419 aa9.53□□□□□ -0.88
SHCBP1-206ENST00000567698 CCDC97Q96F63 343 aaPredicted RBP9.53□□□□□ -0.88
SHCBP1-206ENST00000567698 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
SHCBP1-206ENST00000567698 ARID3AQ99856 593 aa9.53□□□□□ -0.88
SHCBP1-206ENST00000567698 TFIP11Q9UBB9 837 aaKnown RBP9.53□□□□□ -0.88
SHCBP1-206ENST00000567698 MAFBQ9Y5Q3 323 aaPredicted RBP9.53□□□□□ -0.88
SHCBP1-206ENST00000567698 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
SHCBP1-206ENST00000567698 ATP9BO43861 1147 aa9.51□□□□□ -0.89
SHCBP1-206ENST00000567698 KCTD15Q96SI1 283 aaPredicted RBP9.51□□□□□ -0.89
SHCBP1-206ENST00000567698 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
SHCBP1-206ENST00000567698 ZNF592Q92610 1267 aa9.5□□□□□ -0.89
SHCBP1-206ENST00000567698 CDV3Q9UKY7 258 aaKnown RBP9.5□□□□□ -0.89
SHCBP1-206ENST00000567698 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
SHCBP1-206ENST00000567698 RGS20O76081 388 aa9.48□□□□□ -0.89
SHCBP1-206ENST00000567698 NR3C2P08235 984 aa9.48□□□□□ -0.89
SHCBP1-206ENST00000567698 FOXC1Q12948 553 aa9.48□□□□□ -0.89
SHCBP1-206ENST00000567698 RNF135Q8IUD6 432 aa9.48□□□□□ -0.89
SHCBP1-206ENST00000567698 PLPP7Q8NBV4 271 aa9.48□□□□□ -0.89
SHCBP1-206ENST00000567698 TOR4AQ9NXH8 423 aa9.48□□□□□ -0.89
SHCBP1-206ENST00000567698 USP17L5A8MUK1 530 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 ADH1CP00326 375 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 SKIP12755 728 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 PRR20EP86478 221 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 PRR20CP86479 221 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 PRR20DP86480 221 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 PRR20BP86481 221 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 PRR20AP86496 221 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 SLFNL1Q499Z3 407 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 VASH1Q7L8A9 365 aaPredicted RBP9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 PLEKHM2Q8IWE5 1019 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 SEPT12Q8IYM1 358 aa9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 CDCA7Q9BWT1 371 aaPredicted RBP9.47□□□□□ -0.89
SHCBP1-206ENST00000567698 USP17L3A6NCW0 530 aa9.46□□□□□ -0.9
SHCBP1-206ENST00000567698 USP17L4A6NCW7 530 aa9.46□□□□□ -0.9
SHCBP1-206ENST00000567698 TNFRSF10AO00220 468 aa9.46□□□□□ -0.9
SHCBP1-206ENST00000567698 FSHRP23945 695 aa9.46□□□□□ -0.9
SHCBP1-206ENST00000567698 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.9
SHCBP1-206ENST00000567698 USP17L2Q6R6M4 530 aa9.46□□□□□ -0.9
SHCBP1-206ENST00000567698 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.9
SHCBP1-206ENST00000567698 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
SHCBP1-206ENST00000567698 ARID5BQ14865 1188 aa9.45□□□□□ -0.9
SHCBP1-206ENST00000567698 DEPDC4Q8N2C3 294 aa9.45□□□□□ -0.9
SHCBP1-206ENST00000567698 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
SHCBP1-206ENST00000567698 J3QL48 77 aa9.44□□□□□ -0.9
SHCBP1-206ENST00000567698 ERVH48-1M5A8F1 160 aa9.44□□□□□ -0.9
SHCBP1-206ENST00000567698 RFX1P22670 979 aa9.44□□□□□ -0.9
SHCBP1-206ENST00000567698 SNIP1Q8TAD8 396 aaKnown RBP9.44□□□□□ -0.9
SHCBP1-206ENST00000567698 KLF16Q9BXK1 252 aaPredicted RBP9.44□□□□□ -0.9
SHCBP1-206ENST00000567698 SMPD1P17405 629 aa9.43□□□□□ -0.9
SHCBP1-206ENST00000567698 NCOA4Q13772 614 aa9.43□□□□□ -0.9
SHCBP1-206ENST00000567698 MAP7D1Q3KQU3 841 aa9.43□□□□□ -0.9
SHCBP1-206ENST00000567698 ALDH1A1P00352 501 aa9.42□□□□□ -0.9
SHCBP1-206ENST00000567698 SCTRP47872 440 aa9.42□□□□□ -0.9
SHCBP1-206ENST00000567698 NR5A1Q13285 461 aa9.42□□□□□ -0.9
SHCBP1-206ENST00000567698 RNF20Q5VTR2 975 aa9.42□□□□□ -0.9
SHCBP1-206ENST00000567698 PBXIP1Q96AQ6 731 aa9.42□□□□□ -0.9
SHCBP1-206ENST00000567698 TMPRSS4Q9NRS4 437 aa9.42□□□□□ -0.9
SHCBP1-206ENST00000567698 DOLKQ9UPQ8 538 aa9.42□□□□□ -0.9
SHCBP1-206ENST00000567698 LILRA1O75019 489 aa9.41□□□□□ -0.9
SHCBP1-206ENST00000567698 RAB15P59190 212 aa9.41□□□□□ -0.9
SHCBP1-206ENST00000567698 PCDHB11Q9Y5F2 797 aa9.41□□□□□ -0.9
SHCBP1-206ENST00000567698 ERVK-9P63128 1117 aa9.4□□□□□ -0.9
SHCBP1-206ENST00000567698 NNTQ13423 1086 aa9.4□□□□□ -0.9
SHCBP1-206ENST00000567698 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.9
SHCBP1-206ENST00000567698 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
SHCBP1-206ENST00000567698 CCDC116Q8IYX3 515 aa9.4□□□□□ -0.9
SHCBP1-206ENST00000567698 LZTS3O60299 673 aaPredicted RBP9.39□□□□□ -0.91
SHCBP1-206ENST00000567698 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
SHCBP1-206ENST00000567698 DKK1O94907 266 aa9.39□□□□□ -0.91
SHCBP1-206ENST00000567698 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
SHCBP1-206ENST00000567698 CDCA8Q53HL2 280 aa9.38□□□□□ -0.91
SHCBP1-206ENST00000567698 CYP4X1Q8N118 509 aa9.38□□□□□ -0.91
SHCBP1-206ENST00000567698 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
SHCBP1-206ENST00000567698 ZBTB7BO15156 539 aaPredicted RBP9.37□□□□□ -0.91
SHCBP1-206ENST00000567698 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
SHCBP1-206ENST00000567698 CLDN10P78369 228 aa9.37□□□□□ -0.91
SHCBP1-206ENST00000567698 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
SHCBP1-206ENST00000567698 KIAA1024Q9UPX6 916 aa9.37□□□□□ -0.91
SHCBP1-206ENST00000567698 PCDHGA11Q9Y5H2 935 aa9.37□□□□□ -0.91
SHCBP1-206ENST00000567698 TTC24A2A3L6 582 aaPredicted RBP9.36□□□□□ -0.91
SHCBP1-206ENST00000567698 ATG7O95352 703 aa9.36□□□□□ -0.91
SHCBP1-206ENST00000567698 DHX9Q08211 1270 aaKnown RBP9.36□□□□□ -0.91
SHCBP1-206ENST00000567698 EML3Q32P44 896 aa9.36□□□□□ -0.91
SHCBP1-206ENST00000567698 CRTC2Q53ET0 693 aaPredicted RBP9.36□□□□□ -0.91
SHCBP1-206ENST00000567698 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
SHCBP1-206ENST00000567698 HPS1Q92902 700 aa9.36□□□□□ -0.91
SHCBP1-206ENST00000567698 OSBPL3Q9H4L5 887 aa9.36□□□□□ -0.91
SHCBP1-206ENST00000567698 TIMP2P16035 220 aa9.35□□□□□ -0.91
SHCBP1-206ENST00000567698 PTK7Q13308 1070 aa9.35□□□□□ -0.91
SHCBP1-206ENST00000567698 ITPKCQ96DU7 683 aa9.35□□□□□ -0.91
SHCBP1-206ENST00000567698 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
SHCBP1-206ENST00000567698 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
SHCBP1-206ENST00000567698 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
SHCBP1-206ENST00000567698 PDZRN3Q9UPQ7 1066 aa9.35□□□□□ -0.91
SHCBP1-206ENST00000567698 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
SHCBP1-206ENST00000567698 CC2D2BQ6DHV5 1058 aa9.34□□□□□ -0.91
SHCBP1-206ENST00000567698 ARXQ96QS3 562 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms