RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 MTHFSP49914 203 aa13.81□□□□□ -0.2
TCF4-232ENST00000566286 HDAC1Q13547 482 aaPredicted RBP13.81□□□□□ -0.2
TCF4-232ENST00000566286 PREX1Q8TCU6 1659 aa13.8□□□□□ -0.2
TCF4-232ENST00000566286 AGLP35573 1532 aa13.8□□□□□ -0.2
TCF4-232ENST00000566286 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
TCF4-232ENST00000566286 CHMP4AQ9BY43 222 aa13.8□□□□□ -0.2
TCF4-232ENST00000566286 RRAGDQ9NQL2 400 aaPredicted RBP13.8□□□□□ -0.2
TCF4-232ENST00000566286 TRAK2O60296 914 aa13.79□□□□□ -0.2
TCF4-232ENST00000566286 XRCC6P12956 609 aaKnown RBP eCLIP13.79□□□□□ -0.2
TCF4-232ENST00000566286 GZF1Q9H116 711 aaPredicted RBP13.79□□□□□ -0.2
TCF4-232ENST00000566286 SLC12A5Q9H2X9 1139 aa13.79□□□□□ -0.2
TCF4-232ENST00000566286 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
TCF4-232ENST00000566286 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
TCF4-232ENST00000566286 ADGRB1O14514 1584 aa13.78□□□□□ -0.2
TCF4-232ENST00000566286 DDX11L8A8MPP1 907 aa13.78□□□□□ -0.2
TCF4-232ENST00000566286 FLIIQ13045 1269 aa13.78□□□□□ -0.2
TCF4-232ENST00000566286 HSCBQ8IWL3 235 aa13.78□□□□□ -0.2
TCF4-232ENST00000566286 RPGRIP1LQ68CZ1 1315 aa13.78□□□□□ -0.2
TCF4-232ENST00000566286 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
TCF4-232ENST00000566286 NEXMIFQ5QGS0 1516 aa13.78□□□□□ -0.2
TCF4-232ENST00000566286 MRE11P49959 708 aa13.77□□□□□ -0.21
TCF4-232ENST00000566286 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.21
TCF4-232ENST00000566286 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.21
TCF4-232ENST00000566286 ANKRD36BQ8N2N9 1353 aa13.76□□□□□ -0.21
TCF4-232ENST00000566286 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
TCF4-232ENST00000566286 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
TCF4-232ENST00000566286 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
TCF4-232ENST00000566286 MYO5BQ9ULV0 1848 aa13.76□□□□□ -0.21
TCF4-232ENST00000566286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
TCF4-232ENST00000566286 SMC5Q8IY18 1101 aa13.75□□□□□ -0.21
TCF4-232ENST00000566286 ZFP91Q96JP5 570 aaPredicted RBP13.75□□□□□ -0.21
TCF4-232ENST00000566286 NCOA3Q9Y6Q9 1424 aa13.75□□□□□ -0.21
TCF4-232ENST00000566286 ABCC11Q96J66 1382 aa13.75□□□□□ -0.21
TCF4-232ENST00000566286 CLCN1P35523 988 aa13.75□□□□□ -0.21
TCF4-232ENST00000566286 TMEM131LA2VDJ0 1609 aa13.74□□□□□ -0.21
TCF4-232ENST00000566286 IL16Q14005 1332 aa13.74□□□□□ -0.21
TCF4-232ENST00000566286 TRIM27P14373 513 aa13.74□□□□□ -0.21
TCF4-232ENST00000566286 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
TCF4-232ENST00000566286 FAM117AQ9C073 453 aa13.74□□□□□ -0.21
TCF4-232ENST00000566286 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
TCF4-232ENST00000566286 IDI1Q13907 227 aa13.73□□□□□ -0.21
TCF4-232ENST00000566286 ITPRIPQ8IWB1 547 aa13.73□□□□□ -0.21
TCF4-232ENST00000566286 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
TCF4-232ENST00000566286 CLTCQ00610 1675 aaKnown RBP13.73□□□□□ -0.21
TCF4-232ENST00000566286 SNX21Q969T3 373 aa13.73□□□□□ -0.21
TCF4-232ENST00000566286 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
TCF4-232ENST00000566286 PTMSP20962 102 aa13.72□□□□□ -0.21
TCF4-232ENST00000566286 EXOSC9Q06265 439 aaKnown RBP13.72□□□□□ -0.21
TCF4-232ENST00000566286 PDE4DQ08499 809 aa13.72□□□□□ -0.21
TCF4-232ENST00000566286 KRI1Q8N9T8 703 aaKnown RBP13.72□□□□□ -0.21
TCF4-232ENST00000566286 KIF16BQ96L93 1317 aa13.72□□□□□ -0.21
TCF4-232ENST00000566286 ARHGEF28Q8N1W1 1705 aaKnown RBP13.72□□□□□ -0.21
TCF4-232ENST00000566286 IPO8O15397 1037 aaKnown RBP13.72□□□□□ -0.21
TCF4-232ENST00000566286 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
TCF4-232ENST00000566286 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
TCF4-232ENST00000566286 TSR2Q969E8 191 aaKnown RBP13.71□□□□□ -0.21
TCF4-232ENST00000566286 ZFYVE9O95405 1425 aa13.71□□□□□ -0.22
TCF4-232ENST00000566286 TULP4Q9NRJ4 1543 aa13.7□□□□□ -0.22
TCF4-232ENST00000566286 A6NJR5 290 aa13.7□□□□□ -0.22
TCF4-232ENST00000566286 DDIT3P35638 169 aa13.7□□□□□ -0.22
TCF4-232ENST00000566286 PANK2Q9BZ23 570 aa13.7□□□□□ -0.22
TCF4-232ENST00000566286 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
TCF4-232ENST00000566286 E2F4Q16254 413 aa13.7□□□□□ -0.22
TCF4-232ENST00000566286 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
TCF4-232ENST00000566286 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
TCF4-232ENST00000566286 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
TCF4-232ENST00000566286 FBXO31Q5XUX0 539 aaPredicted RBP13.69□□□□□ -0.22
TCF4-232ENST00000566286 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
TCF4-232ENST00000566286 TRIM66O15016 1216 aa13.69□□□□□ -0.22
TCF4-232ENST00000566286 NUCB1Q02818 461 aa13.69□□□□□ -0.22
TCF4-232ENST00000566286 SKOR2Q2VWA4 1001 aaPredicted RBP13.69□□□□□ -0.22
TCF4-232ENST00000566286 NOB1Q9ULX3 412 aaKnown RBP13.69□□□□□ -0.22
TCF4-232ENST00000566286 ANKRD26Q9UPS8 1709 aa13.69□□□□□ -0.22
TCF4-232ENST00000566286 SPATA31D1Q6ZQQ2 1576 aa13.68□□□□□ -0.22
TCF4-232ENST00000566286 COL3A1P02461 1466 aaPredicted RBP13.68□□□□□ -0.22
TCF4-232ENST00000566286 ONECUT3O60422 494 aaPredicted RBP13.68□□□□□ -0.22
TCF4-232ENST00000566286 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
TCF4-232ENST00000566286 NUTM2DQ5VT03 806 aaPredicted RBP13.68□□□□□ -0.22
TCF4-232ENST00000566286 TMEM132EQ6IEE7 984 aa13.68□□□□□ -0.22
TCF4-232ENST00000566286 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
TCF4-232ENST00000566286 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
TCF4-232ENST00000566286 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
TCF4-232ENST00000566286 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
TCF4-232ENST00000566286 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
TCF4-232ENST00000566286 CHMP4BQ9H444 224 aaKnown RBP13.67□□□□□ -0.22
TCF4-232ENST00000566286 HSP90AB1P08238 724 aaKnown RBP13.66□□□□□ -0.22
TCF4-232ENST00000566286 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
TCF4-232ENST00000566286 MED14O60244 1454 aa13.66□□□□□ -0.22
TCF4-232ENST00000566286 RAB3GAP1Q15042 981 aa13.65□□□□□ -0.22
TCF4-232ENST00000566286 GLIPR1L2Q4G1C9 344 aa13.65□□□□□ -0.22
TCF4-232ENST00000566286 SMYD5Q6GMV2 418 aa13.65□□□□□ -0.22
TCF4-232ENST00000566286 CHD1LQ86WJ1 897 aa13.65□□□□□ -0.22
TCF4-232ENST00000566286 TNPO1Q92973 898 aaKnown RBP13.65□□□□□ -0.22
TCF4-232ENST00000566286 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
TCF4-232ENST00000566286 ESPNB1AK53 854 aa13.64□□□□□ -0.23
TCF4-232ENST00000566286 MLECQ14165 292 aa13.64□□□□□ -0.23
TCF4-232ENST00000566286 RETREG2Q8NC44 543 aa13.64□□□□□ -0.23
TCF4-232ENST00000566286 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
TCF4-232ENST00000566286 TRIM44Q96DX7 344 aaPredicted RBP13.64□□□□□ -0.23
TCF4-232ENST00000566286 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms