RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 COL18A1P39060 1754 aa17.15■□□□□ 0.34
SPG7-211ENST00000565370 BLMP54132 1417 aaPredicted RBP17.14■□□□□ 0.33
SPG7-211ENST00000565370 NME9Q86XW9 330 aa17.14■□□□□ 0.33
SPG7-211ENST00000565370 CCDC125Q86Z20 511 aa17.14■□□□□ 0.33
SPG7-211ENST00000565370 KIF20BQ96Q89 1820 aa17.13■□□□□ 0.33
SPG7-211ENST00000565370 WNK3Q9BYP7 1800 aa17.13■□□□□ 0.33
SPG7-211ENST00000565370 USP35Q9P2H5 1018 aa17.13■□□□□ 0.33
SPG7-211ENST00000565370 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
SPG7-211ENST00000565370 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
SPG7-211ENST00000565370 THRAP3Q9Y2W1 955 aaKnown RBP17.12■□□□□ 0.33
SPG7-211ENST00000565370 PARP4Q9UKK3 1724 aaKnown RBP17.12■□□□□ 0.33
SPG7-211ENST00000565370 RGPD1P0DJD0 1748 aa17.11■□□□□ 0.33
SPG7-211ENST00000565370 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPG7-211ENST00000565370 SF3B2Q13435 895 aaKnown RBP17.11■□□□□ 0.33
SPG7-211ENST00000565370 BARGINQ6ZT62 677 aa17.11■□□□□ 0.33
SPG7-211ENST00000565370 TCP11L2Q8N4U5 519 aa17.11■□□□□ 0.33
SPG7-211ENST00000565370 RGPD5Q99666 1765 aa17.1■□□□□ 0.33
SPG7-211ENST00000565370 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
SPG7-211ENST00000565370 TOM1L2Q6ZVM7 507 aa17.09■□□□□ 0.33
SPG7-211ENST00000565370 COG3Q96JB2 828 aa17.09■□□□□ 0.33
SPG7-211ENST00000565370 FAM208AQ9UK61 1670 aaKnown RBP17.08■□□□□ 0.32
SPG7-211ENST00000565370 LRRC37A3O60309 1634 aa17.08■□□□□ 0.32
SPG7-211ENST00000565370 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.32
SPG7-211ENST00000565370 DEFB132Q7Z7B7 95 aa17.06■□□□□ 0.32
SPG7-211ENST00000565370 NSD3Q9BZ95 1437 aa17.05■□□□□ 0.32
SPG7-211ENST00000565370 CCDC7Q96M83 1385 aa17.05■□□□□ 0.32
SPG7-211ENST00000565370 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
SPG7-211ENST00000565370 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
SPG7-211ENST00000565370 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
SPG7-211ENST00000565370 AXIN2Q9Y2T1 843 aa17.04■□□□□ 0.32
SPG7-211ENST00000565370 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
SPG7-211ENST00000565370 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
SPG7-211ENST00000565370 ERBB3P21860 1342 aa17.03■□□□□ 0.32
SPG7-211ENST00000565370 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
SPG7-211ENST00000565370 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
SPG7-211ENST00000565370 OVOS2A0A0G2JMS6 1433 aa17.02■□□□□ 0.31
SPG7-211ENST00000565370 C11orf95C9JLR9 678 aaPredicted RBP17.01■□□□□ 0.31
SPG7-211ENST00000565370 BAG6P46379 1132 aa17.01■□□□□ 0.31
SPG7-211ENST00000565370 FAM196AQ6ZSG2 479 aa17.01■□□□□ 0.31
SPG7-211ENST00000565370 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
SPG7-211ENST00000565370 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
SPG7-211ENST00000565370 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
SPG7-211ENST00000565370 TNS2Q63HR2 1409 aa16.99■□□□□ 0.31
SPG7-211ENST00000565370 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
SPG7-211ENST00000565370 DDB1Q16531 1140 aa16.99■□□□□ 0.31
SPG7-211ENST00000565370 FAM182BQ5T319 152 aa16.99■□□□□ 0.31
SPG7-211ENST00000565370 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
SPG7-211ENST00000565370 LRP5O75197 1615 aa16.99■□□□□ 0.31
SPG7-211ENST00000565370 CGNL1Q0VF96 1302 aa16.98■□□□□ 0.31
SPG7-211ENST00000565370 FYB1O15117 783 aa16.98■□□□□ 0.31
SPG7-211ENST00000565370 AMPHP49418 695 aa16.98■□□□□ 0.31
SPG7-211ENST00000565370 NLRP2Q9NX02 1062 aa16.98■□□□□ 0.31
SPG7-211ENST00000565370 MAP3K19Q56UN5 1328 aa16.97■□□□□ 0.31
SPG7-211ENST00000565370 PEAK1Q9H792 1746 aa16.97■□□□□ 0.31
SPG7-211ENST00000565370 IP6K1Q92551 441 aa16.97■□□□□ 0.31
SPG7-211ENST00000565370 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
SPG7-211ENST00000565370 HOXC9P31274 260 aa16.95■□□□□ 0.3
SPG7-211ENST00000565370 FLT4P35916 1363 aa16.94■□□□□ 0.3
SPG7-211ENST00000565370 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
SPG7-211ENST00000565370 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
SPG7-211ENST00000565370 NSD2O96028 1365 aa16.93■□□□□ 0.3
SPG7-211ENST00000565370 TRIM37O94972 964 aa16.93■□□□□ 0.3
SPG7-211ENST00000565370 IL2RBP14784 551 aa16.93■□□□□ 0.3
SPG7-211ENST00000565370 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
SPG7-211ENST00000565370 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
SPG7-211ENST00000565370 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
SPG7-211ENST00000565370 RRS1Q15050 365 aaKnown RBP16.92■□□□□ 0.3
SPG7-211ENST00000565370 LTV1Q96GA3 475 aaPredicted RBP16.92■□□□□ 0.3
SPG7-211ENST00000565370 SBF2Q86WG5 1849 aa16.91■□□□□ 0.3
SPG7-211ENST00000565370 BCL9O00512 1426 aa16.91■□□□□ 0.3
SPG7-211ENST00000565370 EXOC5O00471 708 aa16.91■□□□□ 0.3
SPG7-211ENST00000565370 RREB1Q92766 1687 aa16.9■□□□□ 0.3
SPG7-211ENST00000565370 INSRP06213 1382 aa16.89■□□□□ 0.3
SPG7-211ENST00000565370 APBA3O96018 575 aa16.89■□□□□ 0.29
SPG7-211ENST00000565370 RGPD2P0DJD1 1756 aa16.89■□□□□ 0.29
SPG7-211ENST00000565370 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
SPG7-211ENST00000565370 EN1Q05925 392 aaPredicted RBP16.88■□□□□ 0.29
SPG7-211ENST00000565370 FBLN1P23142 703 aa16.87■□□□□ 0.29
SPG7-211ENST00000565370 PANK3Q9H999 370 aa16.87■□□□□ 0.29
SPG7-211ENST00000565370 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
SPG7-211ENST00000565370 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
SPG7-211ENST00000565370 MARCH10Q8NA82 808 aaPredicted RBP16.86■□□□□ 0.29
SPG7-211ENST00000565370 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
SPG7-211ENST00000565370 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
SPG7-211ENST00000565370 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
SPG7-211ENST00000565370 PPM1GO15355 546 aaPredicted RBP16.84■□□□□ 0.29
SPG7-211ENST00000565370 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
SPG7-211ENST00000565370 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
SPG7-211ENST00000565370 MEGF6O75095 1541 aa16.84■□□□□ 0.29
SPG7-211ENST00000565370 RAPGEF4Q8WZA2 1011 aa16.83■□□□□ 0.28
SPG7-211ENST00000565370 CAMKK2Q96RR4 588 aa16.83■□□□□ 0.28
SPG7-211ENST00000565370 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
SPG7-211ENST00000565370 R3HDM1Q15032 1099 aaKnown RBP16.82■□□□□ 0.28
SPG7-211ENST00000565370 HSP90AB2PQ58FF8 381 aa16.82■□□□□ 0.28
SPG7-211ENST00000565370 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
SPG7-211ENST00000565370 DOT1LQ8TEK3 1739 aa16.81■□□□□ 0.28
SPG7-211ENST00000565370 WASHC2AQ641Q2 1341 aa16.8■□□□□ 0.28
SPG7-211ENST00000565370 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
SPG7-211ENST00000565370 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
SPG7-211ENST00000565370 MORC1Q86VD1 984 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms