RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 SPATA31A1Q5TZJ5 1347 aa25.69■■□□□ 1.7
PKD1-229ENST00000564890 FAM98CQ17RN3 349 aaKnown RBP25.69■■□□□ 1.7
PKD1-229ENST00000564890 SEPT12Q8IYM1 358 aa25.69■■□□□ 1.7
PKD1-229ENST00000564890 KIF20BQ96Q89 1820 aa25.69■■□□□ 1.7
PKD1-229ENST00000564890 ONECUT3O60422 494 aaPredicted RBP25.68■■□□□ 1.7
PKD1-229ENST00000564890 PANK3Q9H999 370 aa25.68■■□□□ 1.7
PKD1-229ENST00000564890 A0A0G2JS52 829 aa25.67■■□□□ 1.7
PKD1-229ENST00000564890 MYT1Q01538 1121 aa25.67■■□□□ 1.7
PKD1-229ENST00000564890 USP35Q9P2H5 1018 aa25.67■■□□□ 1.7
PKD1-229ENST00000564890 ABCC6O95255 1503 aa25.67■■□□□ 1.7
PKD1-229ENST00000564890 LTN1O94822 1766 aa25.66■■□□□ 1.7
PKD1-229ENST00000564890 CGNL1Q0VF96 1302 aa25.65■■□□□ 1.7
PKD1-229ENST00000564890 RGPD5Q99666 1765 aa25.64■■□□□ 1.7
PKD1-229ENST00000564890 CRB1P82279 1406 aa25.63■■□□□ 1.69
PKD1-229ENST00000564890 FBLN1P23142 703 aa25.63■■□□□ 1.69
PKD1-229ENST00000564890 WDR17Q8IZU2 1322 aa25.63■■□□□ 1.69
PKD1-229ENST00000564890 TOM1L2Q6ZVM7 507 aa25.62■■□□□ 1.69
PKD1-229ENST00000564890 TCP11L2Q8N4U5 519 aa25.62■■□□□ 1.69
PKD1-229ENST00000564890 BRWD3Q6RI45 1802 aa25.61■■□□□ 1.69
PKD1-229ENST00000564890 CSB-PGBD3P0DP91 1061 aa25.61■■□□□ 1.69
PKD1-229ENST00000564890 MAP3K19Q56UN5 1328 aa25.61■■□□□ 1.69
PKD1-229ENST00000564890 CCDC7Q96M83 1385 aa25.6■■□□□ 1.69
PKD1-229ENST00000564890 BARGINQ6ZT62 677 aa25.6■■□□□ 1.69
PKD1-229ENST00000564890 THSD7AQ9UPZ6 1657 aa25.6■■□□□ 1.69
PKD1-229ENST00000564890 THRAP3Q9Y2W1 955 aaKnown RBP25.59■■□□□ 1.69
PKD1-229ENST00000564890 WASHC2AQ641Q2 1341 aa25.59■■□□□ 1.69
PKD1-229ENST00000564890 RRS1Q15050 365 aaKnown RBP25.58■■□□□ 1.69
PKD1-229ENST00000564890 IP6K1Q92551 441 aa25.58■■□□□ 1.69
PKD1-229ENST00000564890 UPF1Q92900 1129 aaKnown RBP eCLIP25.58■■□□□ 1.69
PKD1-229ENST00000564890 AMPHP49418 695 aa25.57■■□□□ 1.68
PKD1-229ENST00000564890 KRT27Q7Z3Y8 459 aa25.57■■□□□ 1.68
PKD1-229ENST00000564890 BLMP54132 1417 aaPredicted RBP25.56■■□□□ 1.68
PKD1-229ENST00000564890 ERBB3P21860 1342 aa25.56■■□□□ 1.68
PKD1-229ENST00000564890 HOXC9P31274 260 aa25.55■■□□□ 1.68
PKD1-229ENST00000564890 ANKRD24Q8TF21 1146 aa25.55■■□□□ 1.68
PKD1-229ENST00000564890 CARD10Q9BWT7 1032 aa25.54■■□□□ 1.68
PKD1-229ENST00000564890 KNSTRNQ9Y448 316 aa25.54■■□□□ 1.68
PKD1-229ENST00000564890 RTL1A6NKG5 1358 aa25.54■■□□□ 1.68
PKD1-229ENST00000564890 NSD2O96028 1365 aa25.52■■□□□ 1.68
PKD1-229ENST00000564890 ANKRD26Q9UPS8 1709 aa25.51■■□□□ 1.68
PKD1-229ENST00000564890 LTV1Q96GA3 475 aaPredicted RBP25.51■■□□□ 1.67
PKD1-229ENST00000564890 NLRP2Q9NX02 1062 aa25.51■■□□□ 1.67
PKD1-229ENST00000564890 TNNT2P45379 298 aaPredicted RBP25.48■■□□□ 1.67
PKD1-229ENST00000564890 EMILIN1Q9Y6C2 1016 aa25.48■■□□□ 1.67
PKD1-229ENST00000564890 FLT4P35916 1363 aa25.47■■□□□ 1.67
PKD1-229ENST00000564890 PEAK1Q9H792 1746 aa25.47■■□□□ 1.67
PKD1-229ENST00000564890 FAM182BQ5T319 152 aa25.47■■□□□ 1.67
PKD1-229ENST00000564890 PARP4Q9UKK3 1724 aaKnown RBP25.46■■□□□ 1.67
PKD1-229ENST00000564890 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
PKD1-229ENST00000564890 PDE3BQ13370 1112 aa25.46■■□□□ 1.67
PKD1-229ENST00000564890 AMER1Q5JTC6 1135 aaPredicted RBP25.46■■□□□ 1.67
PKD1-229ENST00000564890 CDCA7Q9BWT1 371 aaPredicted RBP25.46■■□□□ 1.67
PKD1-229ENST00000564890 WNK3Q9BYP7 1800 aa25.46■■□□□ 1.67
PKD1-229ENST00000564890 PPM1GO15355 546 aaPredicted RBP25.45■■□□□ 1.66
PKD1-229ENST00000564890 MORC1Q86VD1 984 aa25.45■■□□□ 1.66
PKD1-229ENST00000564890 DISP2A7MBM2 1401 aa25.45■■□□□ 1.66
PKD1-229ENST00000564890 PER1O15534 1290 aaPredicted RBP25.44■■□□□ 1.66
PKD1-229ENST00000564890 ZEB1P37275 1124 aaPredicted RBP25.44■■□□□ 1.66
PKD1-229ENST00000564890 HSP90AB2PQ58FF8 381 aa25.44■■□□□ 1.66
PKD1-229ENST00000564890 FAM208AQ9UK61 1670 aaKnown RBP25.44■■□□□ 1.66
PKD1-229ENST00000564890 INSRP06213 1382 aa25.44■■□□□ 1.66
PKD1-229ENST00000564890 POLKQ9UBT6 870 aa25.43■■□□□ 1.66
PKD1-229ENST00000564890 EP400Q96L91 3159 aa25.42■■□□□ 1.66
PKD1-229ENST00000564890 MAP2P11137 1827 aaKnown RBP25.42■■□□□ 1.66
PKD1-229ENST00000564890 LRRC37A3O60309 1634 aa25.42■■□□□ 1.66
PKD1-229ENST00000564890 DDB1Q16531 1140 aa25.42■■□□□ 1.66
PKD1-229ENST00000564890 SMG6Q86US8 1419 aaKnown RBP25.42■■□□□ 1.66
PKD1-229ENST00000564890 CCDC125Q86Z20 511 aa25.4■■□□□ 1.66
PKD1-229ENST00000564890 IL2RBP14784 551 aa25.39■■□□□ 1.66
PKD1-229ENST00000564890 FAM196AQ6ZSG2 479 aa25.38■■□□□ 1.65
PKD1-229ENST00000564890 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
PKD1-229ENST00000564890 CC2D1BQ5T0F9 858 aaKnown RBP25.37■■□□□ 1.65
PKD1-229ENST00000564890 EXOC5O00471 708 aa25.36■■□□□ 1.65
PKD1-229ENST00000564890 NBPF6Q5VWK0 638 aa25.36■■□□□ 1.65
PKD1-229ENST00000564890 NBPF4Q96M43 638 aa25.36■■□□□ 1.65
PKD1-229ENST00000564890 SF3B2Q13435 895 aaKnown RBP25.35■■□□□ 1.65
PKD1-229ENST00000564890 TNS2Q63HR2 1409 aa25.35■■□□□ 1.65
PKD1-229ENST00000564890 NPC1L1Q9UHC9 1359 aa25.34■■□□□ 1.65
PKD1-229ENST00000564890 USHBP1Q8N6Y0 703 aa25.34■■□□□ 1.65
PKD1-229ENST00000564890 CNGB1Q14028 1251 aaPredicted RBP25.33■■□□□ 1.65
PKD1-229ENST00000564890 OVOS2A0A0G2JMS6 1433 aa25.32■■□□□ 1.64
PKD1-229ENST00000564890 MARCH10Q8NA82 808 aaPredicted RBP25.32■■□□□ 1.64
PKD1-229ENST00000564890 TRIM37O94972 964 aa25.3■■□□□ 1.64
PKD1-229ENST00000564890 RGPD1P0DJD0 1748 aa25.29■■□□□ 1.64
PKD1-229ENST00000564890 MEGF6O75095 1541 aa25.28■■□□□ 1.64
PKD1-229ENST00000564890 EIF4A2Q14240 407 aaKnown RBP25.28■■□□□ 1.64
PKD1-229ENST00000564890 DEFB132Q7Z7B7 95 aa25.27■■□□□ 1.64
PKD1-229ENST00000564890 RAPGEF4Q8WZA2 1011 aa25.27■■□□□ 1.64
PKD1-229ENST00000564890 EYA1Q99502 592 aa25.26■■□□□ 1.63
PKD1-229ENST00000564890 TNS1Q9HBL0 1735 aaKnown RBP25.25■■□□□ 1.63
PKD1-229ENST00000564890 BCL9O00512 1426 aa25.24■■□□□ 1.63
PKD1-229ENST00000564890 NCAPD2Q15021 1401 aa25.24■■□□□ 1.63
PKD1-229ENST00000564890 TATP17735 454 aaPredicted RBP25.24■■□□□ 1.63
PKD1-229ENST00000564890 BAG6P46379 1132 aa25.24■■□□□ 1.63
PKD1-229ENST00000564890 MTHFSP49914 203 aa25.23■■□□□ 1.63
PKD1-229ENST00000564890 ZCRB1Q8TBF4 217 aaKnown RBP25.23■■□□□ 1.63
PKD1-229ENST00000564890 DDX54Q8TDD1 881 aaKnown RBP25.22■■□□□ 1.63
PKD1-229ENST00000564890 APBA3O96018 575 aa25.2■■□□□ 1.62
PKD1-229ENST00000564890 SBF2Q86WG5 1849 aa25.2■■□□□ 1.62
PKD1-229ENST00000564890 EN1Q05925 392 aaPredicted RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms