RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 HMOX1P09601 288 aa25.59■■□□□ 1.69
CLN6-205ENST00000564846 AMPHP49418 695 aa25.59■■□□□ 1.69
CLN6-205ENST00000564846 ZNF335Q9H4Z2 1342 aaPredicted RBP25.59■■□□□ 1.69
CLN6-205ENST00000564846 KRT28Q7Z3Y7 464 aa25.59■■□□□ 1.69
CLN6-205ENST00000564846 RRP1P56182 461 aaKnown RBP25.57■■□□□ 1.68
CLN6-205ENST00000564846 KCNH5Q8NCM2 988 aa25.57■■□□□ 1.68
CLN6-205ENST00000564846 XIRP1Q702N8 1843 aaKnown RBP25.56■■□□□ 1.68
CLN6-205ENST00000564846 RIPK4P57078 832 aa25.56■■□□□ 1.68
CLN6-205ENST00000564846 TRIM35Q9UPQ4 493 aa25.55■■□□□ 1.68
CLN6-205ENST00000564846 TRPM3Q9HCF6 1732 aaPredicted RBP25.55■■□□□ 1.68
CLN6-205ENST00000564846 RTL1A6NKG5 1358 aa25.54■■□□□ 1.68
CLN6-205ENST00000564846 XPCQ01831 940 aaPredicted RBP25.54■■□□□ 1.68
CLN6-205ENST00000564846 NFE2L2Q16236 605 aa25.53■■□□□ 1.68
CLN6-205ENST00000564846 MYH16Q9H6N6 1097 aa25.53■■□□□ 1.68
CLN6-205ENST00000564846 RGPD1P0DJD0 1748 aa25.53■■□□□ 1.68
CLN6-205ENST00000564846 ARHGEF10O15013 1369 aa25.52■■□□□ 1.68
CLN6-205ENST00000564846 NFAT5O94916 1531 aa25.52■■□□□ 1.68
CLN6-205ENST00000564846 HOXC9P31274 260 aa25.52■■□□□ 1.68
CLN6-205ENST00000564846 PHACTR3Q96KR7 559 aa25.52■■□□□ 1.68
CLN6-205ENST00000564846 IL16Q14005 1332 aa25.52■■□□□ 1.68
CLN6-205ENST00000564846 SULT6B1Q6IMI4 303 aa25.51■■□□□ 1.67
CLN6-205ENST00000564846 NPHP3Q7Z494 1330 aa25.51■■□□□ 1.67
CLN6-205ENST00000564846 SLIT3O75094 1523 aa25.5■■□□□ 1.67
CLN6-205ENST00000564846 USP19O94966 1318 aa25.48■■□□□ 1.67
CLN6-205ENST00000564846 PPP4R2Q9NY27 417 aa25.48■■□□□ 1.67
CLN6-205ENST00000564846 GCP02774 474 aa25.47■■□□□ 1.67
CLN6-205ENST00000564846 LMOD2Q6P5Q4 547 aa25.47■■□□□ 1.67
CLN6-205ENST00000564846 AEBP1Q8IUX7 1158 aa25.47■■□□□ 1.67
CLN6-205ENST00000564846 IP6K1Q92551 441 aa25.47■■□□□ 1.67
CLN6-205ENST00000564846 IGSF1Q8N6C5 1336 aa25.47■■□□□ 1.67
CLN6-205ENST00000564846 KDRP35968 1356 aa25.46■■□□□ 1.67
CLN6-205ENST00000564846 LMOD3Q0VAK6 560 aa25.46■■□□□ 1.67
CLN6-205ENST00000564846 ALS2Q96Q42 1657 aa25.45■■□□□ 1.67
CLN6-205ENST00000564846 PHRF1Q9P1Y6 1649 aaKnown RBP25.45■■□□□ 1.66
CLN6-205ENST00000564846 CALD1Q05682 793 aaKnown RBP25.44■■□□□ 1.66
CLN6-205ENST00000564846 EYA1Q99502 592 aa25.44■■□□□ 1.66
CLN6-205ENST00000564846 LTN1O94822 1766 aa25.44■■□□□ 1.66
CLN6-205ENST00000564846 BRINP3Q76B58 766 aa25.44■■□□□ 1.66
CLN6-205ENST00000564846 SLAIN2Q9P270 581 aa25.43■■□□□ 1.66
CLN6-205ENST00000564846 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.42■■□□□ 1.66
CLN6-205ENST00000564846 PXDNQ92626 1479 aa25.42■■□□□ 1.66
CLN6-205ENST00000564846 ARHGEF25Q86VW2 580 aa25.41■■□□□ 1.66
CLN6-205ENST00000564846 DDX17Q92841 729 aaKnown RBP25.41■■□□□ 1.66
CLN6-205ENST00000564846 TNS3Q68CZ2 1445 aa25.41■■□□□ 1.66
CLN6-205ENST00000564846 FANCIQ9NVI1 1328 aa25.4■■□□□ 1.66
CLN6-205ENST00000564846 CT47B1P0C2W7 299 aaPredicted RBP25.39■■□□□ 1.66
CLN6-205ENST00000564846 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
CLN6-205ENST00000564846 SPATA31A3Q5VYP0 1347 aa25.37■■□□□ 1.65
CLN6-205ENST00000564846 PLIN1O60240 522 aa25.37■■□□□ 1.65
CLN6-205ENST00000564846 MED1Q15648 1581 aaPredicted RBP25.36■■□□□ 1.65
CLN6-205ENST00000564846 TSR2Q969E8 191 aaKnown RBP25.36■■□□□ 1.65
CLN6-205ENST00000564846 LTV1Q96GA3 475 aaPredicted RBP25.36■■□□□ 1.65
CLN6-205ENST00000564846 ZBTB7CA1YPR0 619 aa25.34■■□□□ 1.65
CLN6-205ENST00000564846 IFT57Q9NWB7 429 aa25.34■■□□□ 1.65
CLN6-205ENST00000564846 DLG5Q8TDM6 1919 aa25.33■■□□□ 1.65
CLN6-205ENST00000564846 GNAI1P63096 354 aa25.33■■□□□ 1.65
CLN6-205ENST00000564846 GAS2L2Q8NHY3 880 aa25.33■■□□□ 1.65
CLN6-205ENST00000564846 BCAR3O75815 825 aa25.32■■□□□ 1.64
CLN6-205ENST00000564846 RARSP54136 660 aaKnown RBP25.32■■□□□ 1.64
CLN6-205ENST00000564846 SOS2Q07890 1332 aaPredicted RBP25.32■■□□□ 1.64
CLN6-205ENST00000564846 PLEKHG5O94827 1062 aa25.31■■□□□ 1.64
CLN6-205ENST00000564846 THUMPD2Q9BTF0 503 aaKnown RBP25.31■■□□□ 1.64
CLN6-205ENST00000564846 EXOSC9Q06265 439 aaKnown RBP25.31■■□□□ 1.64
CLN6-205ENST00000564846 ZNF853P0CG23 659 aa25.3■■□□□ 1.64
CLN6-205ENST00000564846 MTHFSDQ2M296 383 aaKnown RBP25.3■■□□□ 1.64
CLN6-205ENST00000564846 EXOC6Q8TAG9 804 aa25.29■■□□□ 1.64
CLN6-205ENST00000564846 CFAP44Q96MT7 982 aa25.29■■□□□ 1.64
CLN6-205ENST00000564846 FAM83GA6ND36 823 aa25.28■■□□□ 1.64
CLN6-205ENST00000564846 NBPF6Q5VWK0 638 aa25.28■■□□□ 1.64
CLN6-205ENST00000564846 NBPF4Q96M43 638 aa25.28■■□□□ 1.64
CLN6-205ENST00000564846 LAS1LQ9Y4W2 734 aaKnown RBP25.28■■□□□ 1.64
CLN6-205ENST00000564846 ZC3H6P61129 1189 aaKnown RBP25.27■■□□□ 1.64
CLN6-205ENST00000564846 B4GALNT3Q6L9W6 998 aa25.27■■□□□ 1.64
CLN6-205ENST00000564846 ANKRD24Q8TF21 1146 aa25.26■■□□□ 1.63
CLN6-205ENST00000564846 HTATSF1O43719 755 aaKnown RBP25.26■■□□□ 1.63
CLN6-205ENST00000564846 DCTN1Q14203 1278 aa25.26■■□□□ 1.63
CLN6-205ENST00000564846 C20orf194Q5TEA3 1177 aa25.25■■□□□ 1.63
CLN6-205ENST00000564846 RTF1Q92541 710 aaKnown RBP25.25■■□□□ 1.63
CLN6-205ENST00000564846 CRBNQ96SW2 442 aa25.25■■□□□ 1.63
CLN6-205ENST00000564846 ZNF428Q96B54 188 aa25.24■■□□□ 1.63
CLN6-205ENST00000564846 CCDC136Q96JN2 1154 aa25.24■■□□□ 1.63
CLN6-205ENST00000564846 AXIN2Q9Y2T1 843 aa25.24■■□□□ 1.63
CLN6-205ENST00000564846 ABCC6O95255 1503 aa25.24■■□□□ 1.63
CLN6-205ENST00000564846 NCAPD2Q15021 1401 aa25.24■■□□□ 1.63
CLN6-205ENST00000564846 CPDO75976 1380 aa25.24■■□□□ 1.63
CLN6-205ENST00000564846 CRYBG1Q9Y4K1 1723 aa25.23■■□□□ 1.63
CLN6-205ENST00000564846 PDE3AQ14432 1141 aa25.23■■□□□ 1.63
CLN6-205ENST00000564846 USHBP1Q8N6Y0 703 aa25.23■■□□□ 1.63
CLN6-205ENST00000564846 MBIPQ9NS73 344 aa25.23■■□□□ 1.63
CLN6-205ENST00000564846 CABLES1Q8TDN4 633 aa25.23■■□□□ 1.63
CLN6-205ENST00000564846 LTBP4Q8N2S1 1624 aa25.22■■□□□ 1.63
CLN6-205ENST00000564846 CANXP27824 592 aaKnown RBP25.22■■□□□ 1.63
CLN6-205ENST00000564846 MCM10Q7L590 875 aa25.22■■□□□ 1.63
CLN6-205ENST00000564846 NHSL1Q5SYE7 1610 aa25.22■■□□□ 1.63
CLN6-205ENST00000564846 ERBB3P21860 1342 aa25.22■■□□□ 1.63
CLN6-205ENST00000564846 LRRC59Q96AG4 307 aaKnown RBP25.21■■□□□ 1.63
CLN6-205ENST00000564846 GNAT3A8MTJ3 354 aa25.2■■□□□ 1.62
CLN6-205ENST00000564846 CAMTA1Q9Y6Y1 1673 aa25.19■■□□□ 1.62
CLN6-205ENST00000564846 CRB1P82279 1406 aa25.19■■□□□ 1.62
CLN6-205ENST00000564846 MAP3K5Q99683 1374 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms