RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 FAM135BQ49AJ0 1406 aa9.44□□□□□ -0.9
HERPUD1-209ENST00000564678 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
HERPUD1-209ENST00000564678 ANKRD26Q9UPS8 1709 aa9.43□□□□□ -0.9
HERPUD1-209ENST00000564678 HMGB1P09429 215 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-209ENST00000564678 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
HERPUD1-209ENST00000564678 TECPR2O15040 1411 aa9.43□□□□□ -0.9
HERPUD1-209ENST00000564678 ATP7BP35670 1465 aa9.43□□□□□ -0.9
HERPUD1-209ENST00000564678 TCP11L2Q8N4U5 519 aa9.42□□□□□ -0.9
HERPUD1-209ENST00000564678 CABP1Q9NZU7 370 aa9.42□□□□□ -0.9
HERPUD1-209ENST00000564678 TMEM2Q9UHN6 1383 aa9.42□□□□□ -0.9
HERPUD1-209ENST00000564678 NRXN3Q9Y4C0 1643 aa9.42□□□□□ -0.9
HERPUD1-209ENST00000564678 NLRP1Q9C000 1473 aa9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 PLIN1O60240 522 aa9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 PNNQ9H307 717 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 KNDC1Q76NI1 1749 aa9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 IQSEC2Q5JU85 1478 aa9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 WASLO00401 505 aaPredicted RBP9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 WAPLQ7Z5K2 1190 aa9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 CRBNQ96SW2 442 aa9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 GGNBP2Q9H3C7 697 aa9.41□□□□□ -0.9
HERPUD1-209ENST00000564678 METP08581 1390 aa9.4□□□□□ -0.9
HERPUD1-209ENST00000564678 PNPLA6Q8IY17 1366 aa9.4□□□□□ -0.9
HERPUD1-209ENST00000564678 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-209ENST00000564678 UBR1Q8IWV7 1749 aa9.4□□□□□ -0.9
HERPUD1-209ENST00000564678 U2AF1L5P0DN76 240 aaPredicted RBP9.4□□□□□ -0.91
HERPUD1-209ENST00000564678 U2AF1Q01081 240 aaKnown RBP eCLIP9.4□□□□□ -0.91
HERPUD1-209ENST00000564678 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.91
HERPUD1-209ENST00000564678 MS4A1P11836 297 aa9.39□□□□□ -0.91
HERPUD1-209ENST00000564678 CPSF1Q10570 1443 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-209ENST00000564678 CPS1P31327 1500 aa9.39□□□□□ -0.91
HERPUD1-209ENST00000564678 PDE3AQ14432 1141 aa9.39□□□□□ -0.91
HERPUD1-209ENST00000564678 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
HERPUD1-209ENST00000564678 CCDC61Q9Y6R9 512 aa9.39□□□□□ -0.91
HERPUD1-209ENST00000564678 PLEKHG1Q9ULL1 1385 aa9.38□□□□□ -0.91
HERPUD1-209ENST00000564678 COL3A1P02461 1466 aaPredicted RBP9.38□□□□□ -0.91
HERPUD1-209ENST00000564678 CT47B1P0C2W7 299 aaPredicted RBP9.38□□□□□ -0.91
HERPUD1-209ENST00000564678 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
HERPUD1-209ENST00000564678 EDC4Q6P2E9 1401 aaKnown RBP9.38□□□□□ -0.91
HERPUD1-209ENST00000564678 ADGRB2O60241 1585 aa9.38□□□□□ -0.91
HERPUD1-209ENST00000564678 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-209ENST00000564678 AAMPQ13685 434 aa9.37□□□□□ -0.91
HERPUD1-209ENST00000564678 SMYD5Q6GMV2 418 aa9.37□□□□□ -0.91
HERPUD1-209ENST00000564678 TXNDC2Q86VQ3 553 aa9.37□□□□□ -0.91
HERPUD1-209ENST00000564678 PLEKHF1Q96S99 279 aa9.37□□□□□ -0.91
HERPUD1-209ENST00000564678 MYH16Q9H6N6 1097 aa9.37□□□□□ -0.91
HERPUD1-209ENST00000564678 C20orf194Q5TEA3 1177 aa9.37□□□□□ -0.91
HERPUD1-209ENST00000564678 CDC42BPGQ6DT37 1551 aa9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 PPIP5K1Q6PFW1 1433 aa9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 ADAMTS13Q76LX8 1427 aa9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 FCHSD2O94868 740 aa9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 MLLT3P42568 568 aaPredicted RBP9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 CENPQQ7L2Z9 268 aaPredicted RBP9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 NUDT16Q96DE0 195 aaKnown RBP9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 EID1Q9Y6B2 187 aa9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 IL16Q14005 1332 aa9.36□□□□□ -0.91
HERPUD1-209ENST00000564678 AATKQ6ZMQ8 1374 aa9.35□□□□□ -0.91
HERPUD1-209ENST00000564678 BCAR3O75815 825 aa9.35□□□□□ -0.91
HERPUD1-209ENST00000564678 TMPOP42166 694 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-209ENST00000564678 FBXW7Q969H0 707 aa9.35□□□□□ -0.91
HERPUD1-209ENST00000564678 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
HERPUD1-209ENST00000564678 KDM2BQ8NHM5 1336 aa9.35□□□□□ -0.91
HERPUD1-209ENST00000564678 MAPK8IP3Q9UPT6 1336 aa9.35□□□□□ -0.91
HERPUD1-209ENST00000564678 SLIT1O75093 1534 aa9.35□□□□□ -0.91
HERPUD1-209ENST00000564678 U2SURPO15042 1029 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 ABCB7O75027 752 aa9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 PPP1R37O75864 691 aa9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 RARSP54136 660 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 MCM6Q14566 821 aa9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 POLKQ9UBT6 870 aa9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 RRP7AQ9Y3A4 280 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 TBX22Q9Y458 520 aa9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 ARHGAP23Q9P227 1491 aa9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 LTKP29376 864 aa9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 THEMISQ8N1K5 641 aaPredicted RBP9.34□□□□□ -0.91
HERPUD1-209ENST00000564678 NEFMP07197 916 aa9.33□□□□□ -0.92
HERPUD1-209ENST00000564678 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
HERPUD1-209ENST00000564678 MAP2P11137 1827 aaKnown RBP9.33□□□□□ -0.92
HERPUD1-209ENST00000564678 CCDC97Q96F63 343 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-209ENST00000564678 COG3Q96JB2 828 aa9.33□□□□□ -0.92
HERPUD1-209ENST00000564678 MON2Q7Z3U7 1717 aa9.32□□□□□ -0.92
HERPUD1-209ENST00000564678 ROBO2Q9HCK4 1378 aa9.32□□□□□ -0.92
HERPUD1-209ENST00000564678 C3P01024 1663 aa9.32□□□□□ -0.92
HERPUD1-209ENST00000564678 PYGBP11216 843 aa9.32□□□□□ -0.92
HERPUD1-209ENST00000564678 PROSER2Q86WR7 435 aaPredicted RBP9.32□□□□□ -0.92
HERPUD1-209ENST00000564678 ZBTB12Q9Y330 459 aaPredicted RBP9.32□□□□□ -0.92
HERPUD1-209ENST00000564678 AKAP12Q02952 1782 aa9.32□□□□□ -0.92
HERPUD1-209ENST00000564678 CEBPAP49715 358 aaPredicted RBP9.31□□□□□ -0.92
HERPUD1-209ENST00000564678 MFRPQ9BY79 579 aa9.31□□□□□ -0.92
HERPUD1-209ENST00000564678 TRIM35Q9UPQ4 493 aa9.31□□□□□ -0.92
HERPUD1-209ENST00000564678 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-209ENST00000564678 RIPK4P57078 832 aa9.31□□□□□ -0.92
HERPUD1-209ENST00000564678 FNBP4Q8N3X1 1017 aaPredicted RBP9.31□□□□□ -0.92
HERPUD1-209ENST00000564678 BACH2Q9BYV9 841 aa9.31□□□□□ -0.92
HERPUD1-209ENST00000564678 CDK12Q9NYV4 1490 aaPredicted RBP9.3□□□□□ -0.92
HERPUD1-209ENST00000564678 CHRM1P11229 460 aaPredicted RBP9.3□□□□□ -0.92
HERPUD1-209ENST00000564678 PDE4AP27815 886 aa9.3□□□□□ -0.92
HERPUD1-209ENST00000564678 SERPINA10Q9UK55 444 aa9.3□□□□□ -0.92
HERPUD1-209ENST00000564678 FER1L4A9Z1Z3 1794 aa9.3□□□□□ -0.92
HERPUD1-209ENST00000564678 DIP2AQ14689 1571 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms