RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 CCDC116Q8IYX3 515 aa12.09□□□□□ -0.47
AP000842.3-201ENST00000564354 LIMD1Q9UGP4 676 aa12.09□□□□□ -0.47
AP000842.3-201ENST00000564354 TTLL8A6PVC2 850 aa12.08□□□□□ -0.48
AP000842.3-201ENST00000564354 QPCTQ16769 361 aa12.08□□□□□ -0.48
AP000842.3-201ENST00000564354 LILRB3O75022 631 aa12.07□□□□□ -0.48
AP000842.3-201ENST00000564354 PTSQ03393 145 aa12.07□□□□□ -0.48
AP000842.3-201ENST00000564354 TMEM151AQ8N4L1 468 aa12.07□□□□□ -0.48
AP000842.3-201ENST00000564354 NANOS1Q8WY41 292 aaKnown RBP12.07□□□□□ -0.48
AP000842.3-201ENST00000564354 TSC1Q92574 1164 aa12.07□□□□□ -0.48
AP000842.3-201ENST00000564354 CNTNAP3BQ96NU0 1288 aa12.07□□□□□ -0.48
AP000842.3-201ENST00000564354 CNTNAP3Q9BZ76 1288 aa12.07□□□□□ -0.48
AP000842.3-201ENST00000564354 MYSM1Q5VVJ2 828 aa12.06□□□□□ -0.48
AP000842.3-201ENST00000564354 BCANQ96GW7 911 aa12.06□□□□□ -0.48
AP000842.3-201ENST00000564354 RASSF7Q02833 373 aa12.05□□□□□ -0.48
AP000842.3-201ENST00000564354 ADAMTS8Q9UP79 889 aa12.05□□□□□ -0.48
AP000842.3-201ENST00000564354 MAGEB6P1A0A0J9YX57 407 aa12.04□□□□□ -0.48
AP000842.3-201ENST00000564354 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
AP000842.3-201ENST00000564354 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
AP000842.3-201ENST00000564354 RNF225M0QZC1 329 aaPredicted RBP12.04□□□□□ -0.48
AP000842.3-201ENST00000564354 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
AP000842.3-201ENST00000564354 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
AP000842.3-201ENST00000564354 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
AP000842.3-201ENST00000564354 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.48
AP000842.3-201ENST00000564354 GDF11O95390 407 aa12.03□□□□□ -0.48
AP000842.3-201ENST00000564354 Q6ZVU0 165 aa12.03□□□□□ -0.48
AP000842.3-201ENST00000564354 COL25A1Q9BXS0 654 aaPredicted RBP12.03□□□□□ -0.48
AP000842.3-201ENST00000564354 SPINT1O43278 529 aa12.02□□□□□ -0.49
AP000842.3-201ENST00000564354 ERFEQ4G0M1 354 aa12.02□□□□□ -0.49
AP000842.3-201ENST00000564354 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
AP000842.3-201ENST00000564354 PPP1R26Q5T8A7 1209 aaPredicted RBP12.01□□□□□ -0.49
AP000842.3-201ENST00000564354 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
AP000842.3-201ENST00000564354 ZNF385CQ66K41 422 aaPredicted RBP12□□□□□ -0.49
AP000842.3-201ENST00000564354 PGPEP1Q9NXJ5 209 aa12□□□□□ -0.49
AP000842.3-201ENST00000564354 SLC35F4A4IF30 521 aa11.99□□□□□ -0.49
AP000842.3-201ENST00000564354 FIGNL2A6NMB9 653 aa11.99□□□□□ -0.49
AP000842.3-201ENST00000564354 CBLBQ13191 982 aa11.99□□□□□ -0.49
AP000842.3-201ENST00000564354 RTL5Q5HYW3 569 aaPredicted RBP11.99□□□□□ -0.49
AP000842.3-201ENST00000564354 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
AP000842.3-201ENST00000564354 RNFT1Q5M7Z0 435 aa11.98□□□□□ -0.49
AP000842.3-201ENST00000564354 SLURP2P0DP57 97 aa11.96□□□□□ -0.49
AP000842.3-201ENST00000564354 ITGA6P23229 1130 aa11.94□□□□□ -0.5
AP000842.3-201ENST00000564354 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
AP000842.3-201ENST00000564354 SVOPQ8N4V2 548 aa11.94□□□□□ -0.5
AP000842.3-201ENST00000564354 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
AP000842.3-201ENST00000564354 ARHGEF15O94989 841 aa11.93□□□□□ -0.5
AP000842.3-201ENST00000564354 CLK2P49760 499 aaKnown RBP11.93□□□□□ -0.5
AP000842.3-201ENST00000564354 KCTD15Q96SI1 283 aaPredicted RBP11.93□□□□□ -0.5
AP000842.3-201ENST00000564354 POLR3EQ9NVU0 708 aa11.93□□□□□ -0.5
AP000842.3-201ENST00000564354 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
AP000842.3-201ENST00000564354 RSPH6AQ9H0K4 717 aa11.92□□□□□ -0.5
AP000842.3-201ENST00000564354 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
AP000842.3-201ENST00000564354 DHX9Q08211 1270 aaKnown RBP11.91□□□□□ -0.5
AP000842.3-201ENST00000564354 VWA5B2Q8N398 1253 aa11.91□□□□□ -0.5
AP000842.3-201ENST00000564354 SLC10A4Q96EP9 437 aa11.91□□□□□ -0.5
AP000842.3-201ENST00000564354 ARHGAP9Q9BRR9 750 aa11.91□□□□□ -0.5
AP000842.3-201ENST00000564354 CTSOP43234 321 aaPredicted RBP11.9□□□□□ -0.5
AP000842.3-201ENST00000564354 SV2AQ7L0J3 742 aa11.9□□□□□ -0.5
AP000842.3-201ENST00000564354 DNMT3AQ9Y6K1 912 aaPredicted RBP11.9□□□□□ -0.5
AP000842.3-201ENST00000564354 CTDSPL2Q05D32 466 aa11.89□□□□□ -0.51
AP000842.3-201ENST00000564354 FKBPLQ9UIM3 349 aa11.89□□□□□ -0.51
AP000842.3-201ENST00000564354 INTS6LQ5JSJ4 861 aaKnown RBP11.88□□□□□ -0.51
AP000842.3-201ENST00000564354 AGBL1Q96MI9 1066 aa11.88□□□□□ -0.51
AP000842.3-201ENST00000564354 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
AP000842.3-201ENST00000564354 CDC14CA4D256 554 aa11.87□□□□□ -0.51
AP000842.3-201ENST00000564354 INSM2Q96T92 566 aaPredicted RBP11.87□□□□□ -0.51
AP000842.3-201ENST00000564354 ERCC6Q03468 1493 aa11.87□□□□□ -0.51
AP000842.3-201ENST00000564354 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
AP000842.3-201ENST00000564354 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
AP000842.3-201ENST00000564354 IRS1P35568 1242 aa11.86□□□□□ -0.51
AP000842.3-201ENST00000564354 RNF217Q8TC41 542 aa11.86□□□□□ -0.51
AP000842.3-201ENST00000564354 CUX2O14529 1486 aa11.85□□□□□ -0.51
AP000842.3-201ENST00000564354 IGHA1P01876 353 aa11.85□□□□□ -0.51
AP000842.3-201ENST00000564354 RELBQ01201 579 aa11.85□□□□□ -0.51
AP000842.3-201ENST00000564354 KANK3Q6NY19 840 aa11.85□□□□□ -0.51
AP000842.3-201ENST00000564354 KDM4CQ9H3R0 1056 aa11.85□□□□□ -0.51
AP000842.3-201ENST00000564354 ZBTB33Q86T24 672 aa11.84□□□□□ -0.51
AP000842.3-201ENST00000564354 OCSTAMPQ9BR26 566 aa11.84□□□□□ -0.51
AP000842.3-201ENST00000564354 LRRN4Q8WUT4 740 aa11.83□□□□□ -0.52
AP000842.3-201ENST00000564354 POLMQ9NP87 494 aaPredicted RBP11.83□□□□□ -0.52
AP000842.3-201ENST00000564354 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
AP000842.3-201ENST00000564354 GPAT2Q6NUI2 795 aa11.82□□□□□ -0.52
AP000842.3-201ENST00000564354 SCARF2Q96GP6 870 aaPredicted RBP11.82□□□□□ -0.52
AP000842.3-201ENST00000564354 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
AP000842.3-201ENST00000564354 ADAMTS2O95450 1211 aa11.81□□□□□ -0.52
AP000842.3-201ENST00000564354 FOXK2Q01167 660 aa11.81□□□□□ -0.52
AP000842.3-201ENST00000564354 GPSM3Q9Y4H4 160 aa11.81□□□□□ -0.52
AP000842.3-201ENST00000564354 PTK2Q05397 1052 aa11.8□□□□□ -0.52
AP000842.3-201ENST00000564354 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
AP000842.3-201ENST00000564354 SRSF11Q05519 484 aaKnown RBP11.79□□□□□ -0.52
AP000842.3-201ENST00000564354 NR6A1Q15406 480 aa11.79□□□□□ -0.52
AP000842.3-201ENST00000564354 FOXD4L5Q5VV16 416 aaPredicted RBP11.79□□□□□ -0.52
AP000842.3-201ENST00000564354 LYPD4Q6UWN0 246 aa11.79□□□□□ -0.52
AP000842.3-201ENST00000564354 DDRGK1Q96HY6 314 aa11.79□□□□□ -0.52
AP000842.3-201ENST00000564354 ADH1AP07327 375 aa11.78□□□□□ -0.52
AP000842.3-201ENST00000564354 SKIV2LQ15477 1246 aaKnown RBP11.78□□□□□ -0.52
AP000842.3-201ENST00000564354 TMPRSS4Q9NRS4 437 aa11.78□□□□□ -0.52
AP000842.3-201ENST00000564354 GAS6Q14393 721 aa11.77□□□□□ -0.53
AP000842.3-201ENST00000564354 NBPF20Q3BBV1 942 aa11.77□□□□□ -0.53
AP000842.3-201ENST00000564354 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
AP000842.3-201ENST00000564354 ADAM32Q8TC27 787 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms