RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 COL5A2P05997 1499 aaPredicted RBP22.27■■□□□ 1.16
SPSB3-205ENST00000564070 ABCC6O95255 1503 aa22.26■■□□□ 1.15
SPSB3-205ENST00000564070 SF3B2Q13435 895 aaKnown RBP22.26■■□□□ 1.15
SPSB3-205ENST00000564070 ZBTB7CA1YPR0 619 aa22.25■■□□□ 1.15
SPSB3-205ENST00000564070 SOX12O15370 315 aa22.25■■□□□ 1.15
SPSB3-205ENST00000564070 EVA1CP58658 441 aa22.25■■□□□ 1.15
SPSB3-205ENST00000564070 SPATA31A1Q5TZJ5 1347 aa22.24■■□□□ 1.15
SPSB3-205ENST00000564070 COG3Q96JB2 828 aa22.22■■□□□ 1.15
SPSB3-205ENST00000564070 USP35Q9P2H5 1018 aa22.22■■□□□ 1.15
SPSB3-205ENST00000564070 THSD7AQ9UPZ6 1657 aa22.22■■□□□ 1.15
SPSB3-205ENST00000564070 LARP1Q6PKG0 1096 aaKnown RBP22.21■■□□□ 1.15
SPSB3-205ENST00000564070 POLR3GLQ9BT43 218 aa22.21■■□□□ 1.15
SPSB3-205ENST00000564070 KIF20BQ96Q89 1820 aa22.21■■□□□ 1.15
SPSB3-205ENST00000564070 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
SPSB3-205ENST00000564070 LTN1O94822 1766 aa22.2■■□□□ 1.14
SPSB3-205ENST00000564070 CRB1P82279 1406 aa22.2■■□□□ 1.14
SPSB3-205ENST00000564070 FYB1O15117 783 aa22.19■■□□□ 1.14
SPSB3-205ENST00000564070 CARD14Q9BXL6 1004 aa22.19■■□□□ 1.14
SPSB3-205ENST00000564070 AXIN2Q9Y2T1 843 aa22.19■■□□□ 1.14
SPSB3-205ENST00000564070 EN1Q05925 392 aaPredicted RBP22.18■■□□□ 1.14
SPSB3-205ENST00000564070 BARGINQ6ZT62 677 aa22.17■■□□□ 1.14
SPSB3-205ENST00000564070 THRAP3Q9Y2W1 955 aaKnown RBP22.17■■□□□ 1.14
SPSB3-205ENST00000564070 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
SPSB3-205ENST00000564070 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
SPSB3-205ENST00000564070 PSDA5PKW4 1024 aaPredicted RBP22.16■■□□□ 1.14
SPSB3-205ENST00000564070 C11orf95C9JLR9 678 aaPredicted RBP22.16■■□□□ 1.14
SPSB3-205ENST00000564070 BAG6P46379 1132 aa22.16■■□□□ 1.14
SPSB3-205ENST00000564070 GGNBP2Q9H3C7 697 aa22.16■■□□□ 1.14
SPSB3-205ENST00000564070 TCP11L2Q8N4U5 519 aa22.15■■□□□ 1.14
SPSB3-205ENST00000564070 TOM1L2Q6ZVM7 507 aa22.13■■□□□ 1.13
SPSB3-205ENST00000564070 CGNL1Q0VF96 1302 aa22.12■■□□□ 1.13
SPSB3-205ENST00000564070 KIF7Q2M1P5 1343 aa22.12■■□□□ 1.13
SPSB3-205ENST00000564070 TRIM37O94972 964 aa22.12■■□□□ 1.13
SPSB3-205ENST00000564070 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
SPSB3-205ENST00000564070 ERBB3P21860 1342 aa22.1■■□□□ 1.13
SPSB3-205ENST00000564070 CSB-PGBD3P0DP91 1061 aa22.1■■□□□ 1.13
SPSB3-205ENST00000564070 EZH2Q15910 746 aaKnown RBP22.1■■□□□ 1.13
SPSB3-205ENST00000564070 TNS1Q9HBL0 1735 aaKnown RBP22.1■■□□□ 1.13
SPSB3-205ENST00000564070 PARP4Q9UKK3 1724 aaKnown RBP22.1■■□□□ 1.13
SPSB3-205ENST00000564070 MAP3K19Q56UN5 1328 aa22.09■■□□□ 1.13
SPSB3-205ENST00000564070 WNK3Q9BYP7 1800 aa22.09■■□□□ 1.13
SPSB3-205ENST00000564070 IP6K1Q92551 441 aa22.09■■□□□ 1.13
SPSB3-205ENST00000564070 CARD10Q9BWT7 1032 aa22.09■■□□□ 1.13
SPSB3-205ENST00000564070 PANK3Q9H999 370 aa22.09■■□□□ 1.13
SPSB3-205ENST00000564070 RTL1A6NKG5 1358 aa22.09■■□□□ 1.13
SPSB3-205ENST00000564070 FAM196AQ6ZSG2 479 aa22.08■■□□□ 1.13
SPSB3-205ENST00000564070 ANKRD26Q9UPS8 1709 aa22.07■■□□□ 1.12
SPSB3-205ENST00000564070 CCDC7Q96M83 1385 aa22.07■■□□□ 1.12
SPSB3-205ENST00000564070 FBLN1P23142 703 aa22.06■■□□□ 1.12
SPSB3-205ENST00000564070 AMPHP49418 695 aa22.06■■□□□ 1.12
SPSB3-205ENST00000564070 PDE3BQ13370 1112 aa22.06■■□□□ 1.12
SPSB3-205ENST00000564070 ANKRD24Q8TF21 1146 aa22.06■■□□□ 1.12
SPSB3-205ENST00000564070 FAM208AQ9UK61 1670 aaKnown RBP22.06■■□□□ 1.12
SPSB3-205ENST00000564070 HOXC9P31274 260 aa22.05■■□□□ 1.12
SPSB3-205ENST00000564070 R3HDM1Q15032 1099 aaKnown RBP22.05■■□□□ 1.12
SPSB3-205ENST00000564070 CAMKK2Q96RR4 588 aa22.05■■□□□ 1.12
SPSB3-205ENST00000564070 CDCA7Q9BWT1 371 aaPredicted RBP22.05■■□□□ 1.12
SPSB3-205ENST00000564070 NSD2O96028 1365 aa22.04■■□□□ 1.12
SPSB3-205ENST00000564070 KIF24Q5T7B8 1368 aa22.04■■□□□ 1.12
SPSB3-205ENST00000564070 APBA3O96018 575 aa22.04■■□□□ 1.12
SPSB3-205ENST00000564070 RRS1Q15050 365 aaKnown RBP22.04■■□□□ 1.12
SPSB3-205ENST00000564070 LRRC37A3O60309 1634 aa22.04■■□□□ 1.12
SPSB3-205ENST00000564070 DISP2A7MBM2 1401 aa22.04■■□□□ 1.12
SPSB3-205ENST00000564070 NLRP2Q9NX02 1062 aa22.02■■□□□ 1.12
SPSB3-205ENST00000564070 FLT4P35916 1363 aa22■■□□□ 1.11
SPSB3-205ENST00000564070 PEAK1Q9H792 1746 aa22■■□□□ 1.11
SPSB3-205ENST00000564070 WASHC2AQ641Q2 1341 aa22■■□□□ 1.11
SPSB3-205ENST00000564070 DDB1Q16531 1140 aa21.99■■□□□ 1.11
SPSB3-205ENST00000564070 KNSTRNQ9Y448 316 aa21.99■■□□□ 1.11
SPSB3-205ENST00000564070 INSRP06213 1382 aa21.99■■□□□ 1.11
SPSB3-205ENST00000564070 SMG6Q86US8 1419 aaKnown RBP21.98■■□□□ 1.11
SPSB3-205ENST00000564070 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
SPSB3-205ENST00000564070 LRP5O75197 1615 aa21.97■■□□□ 1.11
SPSB3-205ENST00000564070 EMILIN1Q9Y6C2 1016 aa21.96■■□□□ 1.11
SPSB3-205ENST00000564070 IL2RBP14784 551 aa21.95■■□□□ 1.1
SPSB3-205ENST00000564070 PTF1AQ7RTS3 328 aa21.95■■□□□ 1.1
SPSB3-205ENST00000564070 OVOS2A0A0G2JMS6 1433 aa21.95■■□□□ 1.1
SPSB3-205ENST00000564070 TNS2Q63HR2 1409 aa21.95■■□□□ 1.1
SPSB3-205ENST00000564070 HSP90AB2PQ58FF8 381 aa21.94■■□□□ 1.1
SPSB3-205ENST00000564070 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
SPSB3-205ENST00000564070 AMER1Q5JTC6 1135 aaPredicted RBP21.93■■□□□ 1.1
SPSB3-205ENST00000564070 RGPD2P0DJD1 1756 aa21.92■■□□□ 1.1
SPSB3-205ENST00000564070 EXOC5O00471 708 aa21.92■■□□□ 1.1
SPSB3-205ENST00000564070 PER1O15534 1290 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-205ENST00000564070 POLKQ9UBT6 870 aa21.92■■□□□ 1.1
SPSB3-205ENST00000564070 PPM1GO15355 546 aaPredicted RBP21.91■■□□□ 1.1
SPSB3-205ENST00000564070 TNNT2P45379 298 aaPredicted RBP21.91■■□□□ 1.1
SPSB3-205ENST00000564070 MORC1Q86VD1 984 aa21.91■■□□□ 1.1
SPSB3-205ENST00000564070 RREB1Q92766 1687 aa21.91■■□□□ 1.1
SPSB3-205ENST00000564070 BCL9O00512 1426 aa21.9■■□□□ 1.1
SPSB3-205ENST00000564070 MARCH10Q8NA82 808 aaPredicted RBP21.9■■□□□ 1.1
SPSB3-205ENST00000564070 NUP188Q5SRE5 1749 aa21.89■■□□□ 1.1
SPSB3-205ENST00000564070 PARD3Q8TEW0 1356 aa21.89■■□□□ 1.1
SPSB3-205ENST00000564070 NBPF6Q5VWK0 638 aa21.88■■□□□ 1.09
SPSB3-205ENST00000564070 NBPF4Q96M43 638 aa21.88■■□□□ 1.09
SPSB3-205ENST00000564070 NPC1L1Q9UHC9 1359 aa21.87■■□□□ 1.09
SPSB3-205ENST00000564070 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
SPSB3-205ENST00000564070 NCAPD2Q15021 1401 aa21.85■■□□□ 1.09
SPSB3-205ENST00000564070 MEGF6O75095 1541 aa21.85■■□□□ 1.09
SPSB3-205ENST00000564070 USHBP1Q8N6Y0 703 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms