RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BLMP54132 1417 aaPredicted RBP17.35■□□□□ 0.37
SPG7-209ENST00000564047 SOX12O15370 315 aa17.34■□□□□ 0.37
SPG7-209ENST00000564047 LRP5O75197 1615 aa17.34■□□□□ 0.37
SPG7-209ENST00000564047 RRS1Q15050 365 aaKnown RBP17.34■□□□□ 0.37
SPG7-209ENST00000564047 CFAP53Q96M91 514 aa17.34■□□□□ 0.37
SPG7-209ENST00000564047 NFAT5O94916 1531 aa17.33■□□□□ 0.37
SPG7-209ENST00000564047 BCL9LQ86UU0 1499 aa17.33■□□□□ 0.37
SPG7-209ENST00000564047 INSRP06213 1382 aa17.33■□□□□ 0.36
SPG7-209ENST00000564047 KIF24Q5T7B8 1368 aa17.33■□□□□ 0.36
SPG7-209ENST00000564047 MAP3K19Q56UN5 1328 aa17.33■□□□□ 0.36
SPG7-209ENST00000564047 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
SPG7-209ENST00000564047 EMILIN1Q9Y6C2 1016 aa17.33■□□□□ 0.36
SPG7-209ENST00000564047 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.31■□□□□ 0.36
SPG7-209ENST00000564047 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
SPG7-209ENST00000564047 PHRF1Q9P1Y6 1649 aaKnown RBP17.3■□□□□ 0.36
SPG7-209ENST00000564047 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
SPG7-209ENST00000564047 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
SPG7-209ENST00000564047 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
SPG7-209ENST00000564047 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
SPG7-209ENST00000564047 CRYBG1Q9Y4K1 1723 aa17.3■□□□□ 0.36
SPG7-209ENST00000564047 RTL1A6NKG5 1358 aa17.29■□□□□ 0.36
SPG7-209ENST00000564047 FLT4P35916 1363 aa17.29■□□□□ 0.36
SPG7-209ENST00000564047 AMPHP49418 695 aa17.29■□□□□ 0.36
SPG7-209ENST00000564047 DEFB132Q7Z7B7 95 aa17.29■□□□□ 0.36
SPG7-209ENST00000564047 CPDO75976 1380 aa17.28■□□□□ 0.36
SPG7-209ENST00000564047 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
SPG7-209ENST00000564047 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
SPG7-209ENST00000564047 MAP2P11137 1827 aaKnown RBP17.27■□□□□ 0.36
SPG7-209ENST00000564047 HOXC9P31274 260 aa17.27■□□□□ 0.36
SPG7-209ENST00000564047 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
SPG7-209ENST00000564047 IP6K1Q92551 441 aa17.27■□□□□ 0.36
SPG7-209ENST00000564047 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
SPG7-209ENST00000564047 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
SPG7-209ENST00000564047 PEAK1Q9H792 1746 aa17.26■□□□□ 0.35
SPG7-209ENST00000564047 GLI3P10071 1580 aa17.25■□□□□ 0.35
SPG7-209ENST00000564047 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
SPG7-209ENST00000564047 UNC5CLQ8IV45 518 aa17.25■□□□□ 0.35
SPG7-209ENST00000564047 NUDCQ9Y266 331 aa17.25■□□□□ 0.35
SPG7-209ENST00000564047 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
SPG7-209ENST00000564047 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
SPG7-209ENST00000564047 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
SPG7-209ENST00000564047 ABCC6O95255 1503 aa17.23■□□□□ 0.35
SPG7-209ENST00000564047 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
SPG7-209ENST00000564047 IL13P35225 146 aa17.23■□□□□ 0.35
SPG7-209ENST00000564047 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
SPG7-209ENST00000564047 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
SPG7-209ENST00000564047 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
SPG7-209ENST00000564047 LTN1O94822 1766 aa17.22■□□□□ 0.35
SPG7-209ENST00000564047 SLIT2O94813 1529 aa17.21■□□□□ 0.35
SPG7-209ENST00000564047 PSDA5PKW4 1024 aaPredicted RBP17.2■□□□□ 0.34
SPG7-209ENST00000564047 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
SPG7-209ENST00000564047 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
SPG7-209ENST00000564047 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
SPG7-209ENST00000564047 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
SPG7-209ENST00000564047 AXIN2Q9Y2T1 843 aa17.19■□□□□ 0.34
SPG7-209ENST00000564047 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
SPG7-209ENST00000564047 BAG6P46379 1132 aa17.18■□□□□ 0.34
SPG7-209ENST00000564047 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
SPG7-209ENST00000564047 COL18A1P39060 1754 aa17.17■□□□□ 0.34
SPG7-209ENST00000564047 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
SPG7-209ENST00000564047 KRT27Q7Z3Y8 459 aa17.17■□□□□ 0.34
SPG7-209ENST00000564047 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
SPG7-209ENST00000564047 LTV1Q96GA3 475 aaPredicted RBP17.16■□□□□ 0.34
SPG7-209ENST00000564047 ERBB3P21860 1342 aa17.16■□□□□ 0.34
SPG7-209ENST00000564047 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
SPG7-209ENST00000564047 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
SPG7-209ENST00000564047 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
SPG7-209ENST00000564047 NWD2Q9ULI1 1742 aa17.14■□□□□ 0.33
SPG7-209ENST00000564047 FCHSD2O94868 740 aa17.14■□□□□ 0.33
SPG7-209ENST00000564047 VPS72Q15906 364 aa17.14■□□□□ 0.33
SPG7-209ENST00000564047 EYA1Q99502 592 aa17.14■□□□□ 0.33
SPG7-209ENST00000564047 PNNQ9H307 717 aaKnown RBP17.14■□□□□ 0.33
SPG7-209ENST00000564047 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
SPG7-209ENST00000564047 COL14A1Q05707 1796 aaKnown RBP17.13■□□□□ 0.33
SPG7-209ENST00000564047 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
SPG7-209ENST00000564047 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
SPG7-209ENST00000564047 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
SPG7-209ENST00000564047 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
SPG7-209ENST00000564047 PLCH1Q4KWH8 1693 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 A0A0G2JS52 829 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 CSB-PGBD3P0DP91 1061 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 MYT1Q01538 1121 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 WDR17Q8IZU2 1322 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 KDRP35968 1356 aa17.11■□□□□ 0.33
SPG7-209ENST00000564047 HMOX1P09601 288 aa17.1■□□□□ 0.33
SPG7-209ENST00000564047 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
SPG7-209ENST00000564047 NCAPD2Q15021 1401 aa17.1■□□□□ 0.33
SPG7-209ENST00000564047 EVA1CP58658 441 aa17.09■□□□□ 0.33
SPG7-209ENST00000564047 AEBP1Q8IUX7 1158 aa17.09■□□□□ 0.33
SPG7-209ENST00000564047 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
SPG7-209ENST00000564047 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
SPG7-209ENST00000564047 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
SPG7-209ENST00000564047 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
SPG7-209ENST00000564047 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
SPG7-209ENST00000564047 NEFMP07197 916 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms