RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 CGNL1Q0VF96 1302 aa20.28■□□□□ 0.84
SCAMP2-203ENST00000563663 SOX12O15370 315 aa20.28■□□□□ 0.84
SCAMP2-203ENST00000563663 COG3Q96JB2 828 aa20.28■□□□□ 0.84
SCAMP2-203ENST00000563663 QTRT2Q9H974 415 aaKnown RBP20.27■□□□□ 0.84
SCAMP2-203ENST00000563663 TRPC5Q9UL62 973 aaPredicted RBP20.26■□□□□ 0.83
SCAMP2-203ENST00000563663 CDK12Q9NYV4 1490 aaPredicted RBP20.26■□□□□ 0.83
SCAMP2-203ENST00000563663 VPS72Q15906 364 aa20.26■□□□□ 0.83
SCAMP2-203ENST00000563663 MAP2P11137 1827 aaKnown RBP20.25■□□□□ 0.83
SCAMP2-203ENST00000563663 NSD2O96028 1365 aa20.25■□□□□ 0.83
SCAMP2-203ENST00000563663 RGS12O14924 1447 aa20.25■□□□□ 0.83
SCAMP2-203ENST00000563663 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
SCAMP2-203ENST00000563663 GJD4Q96KN9 370 aaPredicted RBP20.23■□□□□ 0.83
SCAMP2-203ENST00000563663 THSD7AQ9UPZ6 1657 aa20.23■□□□□ 0.83
SCAMP2-203ENST00000563663 RBM6P78332 1123 aaKnown RBP20.22■□□□□ 0.83
SCAMP2-203ENST00000563663 SPATA31A5Q5VU36 1347 aa20.22■□□□□ 0.83
SCAMP2-203ENST00000563663 SPATA31A7Q8IWB4 1347 aa20.22■□□□□ 0.83
SCAMP2-203ENST00000563663 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
SCAMP2-203ENST00000563663 WNK3Q9BYP7 1800 aa20.21■□□□□ 0.83
SCAMP2-203ENST00000563663 RXRBP28702 533 aa20.2■□□□□ 0.82
SCAMP2-203ENST00000563663 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
SCAMP2-203ENST00000563663 BRWD3Q6RI45 1802 aa20.2■□□□□ 0.82
SCAMP2-203ENST00000563663 RTL1A6NKG5 1358 aa20.2■□□□□ 0.82
SCAMP2-203ENST00000563663 BLMP54132 1417 aaPredicted RBP20.19■□□□□ 0.82
SCAMP2-203ENST00000563663 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
SCAMP2-203ENST00000563663 LARP1Q6PKG0 1096 aaKnown RBP20.19■□□□□ 0.82
SCAMP2-203ENST00000563663 KNSTRNQ9Y448 316 aa20.19■□□□□ 0.82
SCAMP2-203ENST00000563663 SPATA31A1Q5TZJ5 1347 aa20.19■□□□□ 0.82
SCAMP2-203ENST00000563663 RGPD2P0DJD1 1756 aa20.19■□□□□ 0.82
SCAMP2-203ENST00000563663 ERBB3P21860 1342 aa20.18■□□□□ 0.82
SCAMP2-203ENST00000563663 IP6K1Q92551 441 aa20.18■□□□□ 0.82
SCAMP2-203ENST00000563663 FAM208AQ9UK61 1670 aaKnown RBP20.18■□□□□ 0.82
SCAMP2-203ENST00000563663 CRB1P82279 1406 aa20.17■□□□□ 0.82
SCAMP2-203ENST00000563663 ZBTB7CA1YPR0 619 aa20.17■□□□□ 0.82
SCAMP2-203ENST00000563663 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
SCAMP2-203ENST00000563663 HOXC9P31274 260 aa20.17■□□□□ 0.82
SCAMP2-203ENST00000563663 STRN4Q9NRL3 753 aa20.17■□□□□ 0.82
SCAMP2-203ENST00000563663 WDR17Q8IZU2 1322 aa20.17■□□□□ 0.82
SCAMP2-203ENST00000563663 KIF24Q5T7B8 1368 aa20.17■□□□□ 0.82
SCAMP2-203ENST00000563663 EMILIN1Q9Y6C2 1016 aa20.16■□□□□ 0.82
SCAMP2-203ENST00000563663 POLKQ9UBT6 870 aa20.14■□□□□ 0.81
SCAMP2-203ENST00000563663 FLT4P35916 1363 aa20.14■□□□□ 0.81
SCAMP2-203ENST00000563663 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
SCAMP2-203ENST00000563663 DISP2A7MBM2 1401 aa20.12■□□□□ 0.81
SCAMP2-203ENST00000563663 INSRP06213 1382 aa20.12■□□□□ 0.81
SCAMP2-203ENST00000563663 LRRC37A3O60309 1634 aa20.11■□□□□ 0.81
SCAMP2-203ENST00000563663 EVA1CP58658 441 aa20.11■□□□□ 0.81
SCAMP2-203ENST00000563663 HSP90AB2PQ58FF8 381 aa20.11■□□□□ 0.81
SCAMP2-203ENST00000563663 ANKRD24Q8TF21 1146 aa20.11■□□□□ 0.81
SCAMP2-203ENST00000563663 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
SCAMP2-203ENST00000563663 FAM98CQ17RN3 349 aaKnown RBP20.1■□□□□ 0.81
SCAMP2-203ENST00000563663 CC2D1BQ5T0F9 858 aaKnown RBP20.1■□□□□ 0.81
SCAMP2-203ENST00000563663 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
SCAMP2-203ENST00000563663 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
SCAMP2-203ENST00000563663 CCDC9Q9Y3X0 531 aaKnown RBP20.09■□□□□ 0.81
SCAMP2-203ENST00000563663 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
SCAMP2-203ENST00000563663 AMPHP49418 695 aa20.08■□□□□ 0.81
SCAMP2-203ENST00000563663 CARD10Q9BWT7 1032 aa20.08■□□□□ 0.81
SCAMP2-203ENST00000563663 TCP11L2Q8N4U5 519 aa20.08■□□□□ 0.8
SCAMP2-203ENST00000563663 SEPT12Q8IYM1 358 aa20.07■□□□□ 0.8
SCAMP2-203ENST00000563663 USP35Q9P2H5 1018 aa20.07■□□□□ 0.8
SCAMP2-203ENST00000563663 RGPD1P0DJD0 1748 aa20.07■□□□□ 0.8
SCAMP2-203ENST00000563663 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
SCAMP2-203ENST00000563663 TOM1L2Q6ZVM7 507 aa20.06■□□□□ 0.8
SCAMP2-203ENST00000563663 THRAP3Q9Y2W1 955 aaKnown RBP20.06■□□□□ 0.8
SCAMP2-203ENST00000563663 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
SCAMP2-203ENST00000563663 GTF3C3Q9Y5Q9 886 aa20.05■□□□□ 0.8
SCAMP2-203ENST00000563663 SHANK3Q9BYB0 1731 aa20.05■□□□□ 0.8
SCAMP2-203ENST00000563663 PARD3Q8TEW0 1356 aa20.04■□□□□ 0.8
SCAMP2-203ENST00000563663 CSB-PGBD3P0DP91 1061 aa20.03■□□□□ 0.8
SCAMP2-203ENST00000563663 NBPF6Q5VWK0 638 aa20.03■□□□□ 0.8
SCAMP2-203ENST00000563663 LTV1Q96GA3 475 aaPredicted RBP20.03■□□□□ 0.8
SCAMP2-203ENST00000563663 NBPF4Q96M43 638 aa20.03■□□□□ 0.8
SCAMP2-203ENST00000563663 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
SCAMP2-203ENST00000563663 MEGF6O75095 1541 aa20.02■□□□□ 0.79
SCAMP2-203ENST00000563663 PPM1GO15355 546 aaPredicted RBP20■□□□□ 0.79
SCAMP2-203ENST00000563663 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
SCAMP2-203ENST00000563663 NLRP2Q9NX02 1062 aa20■□□□□ 0.79
SCAMP2-203ENST00000563663 MTHFSP49914 203 aa19.99■□□□□ 0.79
SCAMP2-203ENST00000563663 TNS2Q63HR2 1409 aa19.99■□□□□ 0.79
SCAMP2-203ENST00000563663 SOCS7O14512 581 aa19.97■□□□□ 0.79
SCAMP2-203ENST00000563663 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
SCAMP2-203ENST00000563663 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
SCAMP2-203ENST00000563663 OVOS2A0A0G2JMS6 1433 aa19.96■□□□□ 0.79
SCAMP2-203ENST00000563663 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
SCAMP2-203ENST00000563663 KRT27Q7Z3Y8 459 aa19.96■□□□□ 0.79
SCAMP2-203ENST00000563663 USHBP1Q8N6Y0 703 aa19.96■□□□□ 0.79
SCAMP2-203ENST00000563663 EYA1Q99502 592 aa19.96■□□□□ 0.79
SCAMP2-203ENST00000563663 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
SCAMP2-203ENST00000563663 SBF2Q86WG5 1849 aa19.95■□□□□ 0.78
SCAMP2-203ENST00000563663 IL13P35225 146 aa19.95■□□□□ 0.78
SCAMP2-203ENST00000563663 CDCA7Q9BWT1 371 aaPredicted RBP19.95■□□□□ 0.78
SCAMP2-203ENST00000563663 IL2RBP14784 551 aa19.94■□□□□ 0.78
SCAMP2-203ENST00000563663 FAM182BQ5T319 152 aa19.93■□□□□ 0.78
SCAMP2-203ENST00000563663 A0A0G2JS52 829 aa19.93■□□□□ 0.78
SCAMP2-203ENST00000563663 MYT1Q01538 1121 aa19.93■□□□□ 0.78
SCAMP2-203ENST00000563663 TNS1Q9HBL0 1735 aaKnown RBP19.93■□□□□ 0.78
SCAMP2-203ENST00000563663 KDRP35968 1356 aa19.92■□□□□ 0.78
SCAMP2-203ENST00000563663 BCL9O00512 1426 aa19.91■□□□□ 0.78
SCAMP2-203ENST00000563663 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
SCAMP2-203ENST00000563663 DDB1Q16531 1140 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms