RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 RLBP1P12271 317 aa27.35■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 ALDH1L2Q3SY69 923 aa27.35■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 FTSJ3Q8IY81 847 aaKnown RBP27.35■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 DZIP1LQ8IYY4 767 aaKnown RBP27.35■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 NGDNQ8NEJ9 315 aaKnown RBP27.35■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 GNAI1P63096 354 aa27.35■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 ANKLE2Q86XL3 938 aa27.35■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 MVPQ14764 893 aaKnown RBP27.34■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 SSH1Q8WYL5 1049 aa27.34■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 IFT57Q9NWB7 429 aa27.34■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 KIF16BQ96L93 1317 aa27.34■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 IPO9Q96P70 1041 aaKnown RBP27.33■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 IPO8O15397 1037 aaKnown RBP27.32■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 KCNA6P17658 529 aa27.32■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 IGHDP01880 384 aa27.32■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 EIF4A2Q14240 407 aaKnown RBP27.32■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 ADAMTSL3P82987 1691 aa27.31■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 SKAP1Q86WV1 359 aa27.31■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 FMN2Q9NZ56 1722 aa27.31■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 ATF7IPQ6VMQ6 1270 aa27.3■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 TNNQ9UQP3 1299 aa27.3■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 BRPF1P55201 1214 aaPredicted RBP27.28■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 NOP58Q9Y2X3 529 aaKnown RBP27.28■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 LAS1LQ9Y4W2 734 aaKnown RBP27.28■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 ZNF853P0CG23 659 aa27.27■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 FAM161AQ3B820 660 aa27.27■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 RWDD1Q9H446 243 aaPredicted RBP27.27■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 RGPD8O14715 1765 aaPredicted RBP27.27■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 PEAK1Q9H792 1746 aa27.27■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 TRIM27P14373 513 aa27.27■■□□□ 1.96
VPS9D1-AS1-202ENST00000562866 DDX19BQ9UMR2 479 aa27.26■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 NOB1Q9ULX3 412 aaKnown RBP27.25■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 CHD2O14647 1828 aaKnown RBP27.25■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 SBNO1A3KN83 1393 aa27.25■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 RGPD1P0DJD0 1748 aa27.25■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 SULT6B1Q6IMI4 303 aa27.25■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 CFAP44Q96MT7 982 aa27.25■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 RGS3P49796 1198 aa27.24■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 PCDHB15Q9Y5E8 787 aa27.24■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 DLG5Q8TDM6 1919 aa27.24■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 ARHGEF10O15013 1369 aa27.24■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 FLT4P35916 1363 aa27.24■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 PIK3C2AO00443 1686 aa27.22■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 HSP90AB2PQ58FF8 381 aa27.22■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 THUMPD2Q9BTF0 503 aaKnown RBP27.22■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 MAP3K19Q56UN5 1328 aa27.21■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 MBIPQ9NS73 344 aa27.21■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 ZBTB47Q9UFB7 747 aaPredicted RBP27.21■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 NPM2Q86SE8 214 aaKnown RBP27.2■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 KIF24Q5T7B8 1368 aa27.2■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 USP54Q70EL1 1684 aa27.2■■□□□ 1.95
VPS9D1-AS1-202ENST00000562866 VAMP4O75379 141 aa27.2■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 AEBP1Q8IUX7 1158 aa27.2■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 ITPRIPQ8IWB1 547 aa27.2■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 SETD1BQ9UPS6 1966 aaKnown RBP27.19■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 ARHGAP45Q92619 1136 aa27.18■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 AMPHP49418 695 aa27.17■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 C8orf34Q49A92 452 aa27.17■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 CHMP4BQ9H444 224 aaKnown RBP27.17■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 SOX12O15370 315 aa27.16■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 NLRP6P59044 892 aa27.16■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 HAP1P54257 671 aaPredicted RBP27.15■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 TMEM57Q8N5G2 664 aa27.14■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 MRPL50Q8N5N7 158 aaKnown RBP27.14■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 DDRGK1Q96HY6 314 aa27.14■■□□□ 1.94
VPS9D1-AS1-202ENST00000562866 TWISTNBQ3B726 338 aaPredicted RBP27.14■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 NPHP4O75161 1426 aaPredicted RBP27.13■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 HDAC1Q13547 482 aaPredicted RBP27.13■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 PHF8Q9UPP1 1060 aa27.13■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 ADGRL3Q9HAR2 1447 aa27.13■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 FAM83GA6ND36 823 aa27.12■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 KDRP35968 1356 aa27.12■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 TSPYL6Q8N831 410 aa27.11■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 ZBTB40Q9NUA8 1239 aa27.1■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 IGSF1Q8N6C5 1336 aa27.1■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 ABTB2Q8N961 1025 aa27.09■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 PDZRN3Q9UPQ7 1066 aa27.09■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 DCTN1Q14203 1278 aa27.09■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 MARF1Q9Y4F3 1742 aaKnown RBP27.08■■□□□ 1.93
VPS9D1-AS1-202ENST00000562866 CHL1O00533 1208 aa27.07■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 PAK3O75914 559 aaPredicted RBP27.07■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 C8orf58Q8NAV2 365 aa27.07■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 VIRMAQ69YN4 1812 aaKnown RBP27.06■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 RTL1A6NKG5 1358 aa27.06■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 KIAA0232Q92628 1395 aa27.06■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 API5Q9BZZ5 524 aaKnown RBP27.06■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 GAS2L2Q8NHY3 880 aa27.05■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 HOXC9P31274 260 aa27.04■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 EYA1Q99502 592 aa27.04■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 ELL2O00472 640 aaPredicted RBP27.04■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 RTF1Q92541 710 aaKnown RBP27.04■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 ABCC4O15439 1325 aa27.03■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 MCM10Q7L590 875 aa27.02■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 CRB1P82279 1406 aa27.02■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 NWD1Q149M9 1564 aa27.02■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 HTATSF1O43719 755 aaKnown RBP27.02■■□□□ 1.92
VPS9D1-AS1-202ENST00000562866 MTHFSDQ2M296 383 aaKnown RBP27.01■■□□□ 1.91
VPS9D1-AS1-202ENST00000562866 NUTM2GQ5VZR2 741 aa27.01■■□□□ 1.91
VPS9D1-AS1-202ENST00000562866 C14orf37Q86TY3 774 aa26.99■■□□□ 1.91
VPS9D1-AS1-202ENST00000562866 SMC5Q8IY18 1101 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms